RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 CCNJLQ8IV13 435 aa10.51□□□□□ -0.73
CCDC39-202ENST00000471307 ASAP3Q8TDY4 903 aa10.51□□□□□ -0.73
CCDC39-202ENST00000471307 KLHDC7BQ96G42 594 aa10.51□□□□□ -0.73
CCDC39-202ENST00000471307 CEP41Q9BYV8 373 aa10.51□□□□□ -0.73
CCDC39-202ENST00000471307 KCNK4Q9NYG8 393 aa10.51□□□□□ -0.73
CCDC39-202ENST00000471307 A0A1W2PP55 124 aa10.5□□□□□ -0.73
CCDC39-202ENST00000471307 ALX3O95076 343 aa10.5□□□□□ -0.73
CCDC39-202ENST00000471307 ITGB7P26010 798 aa10.5□□□□□ -0.73
CCDC39-202ENST00000471307 FOXD4L4Q8WXT5 416 aaPredicted RBP10.5□□□□□ -0.73
CCDC39-202ENST00000471307 ADAM11O75078 769 aa10.49□□□□□ -0.73
CCDC39-202ENST00000471307 WISP1O95388 367 aa10.49□□□□□ -0.73
CCDC39-202ENST00000471307 SLC7A3Q8WY07 619 aa10.49□□□□□ -0.73
CCDC39-202ENST00000471307 LIN7BQ9HAP6 207 aa10.49□□□□□ -0.73
CCDC39-202ENST00000471307 EIF1AYO14602 144 aaKnown RBP10.48□□□□□ -0.73
CCDC39-202ENST00000471307 UVSSAQ2YD98 709 aa10.48□□□□□ -0.73
CCDC39-202ENST00000471307 USPL1Q5W0Q7 1092 aa10.48□□□□□ -0.73
CCDC39-202ENST00000471307 KIAA1211Q6ZU35 1233 aa10.48□□□□□ -0.73
CCDC39-202ENST00000471307 AGGF1Q8N302 714 aaeCLIP10.48□□□□□ -0.73
CCDC39-202ENST00000471307 TCF12Q99081 682 aa10.48□□□□□ -0.73
CCDC39-202ENST00000471307 NIF3L1Q9GZT8 377 aa10.48□□□□□ -0.73
CCDC39-202ENST00000471307 A0A096LPE4 126 aa10.47□□□□□ -0.73
CCDC39-202ENST00000471307 LOC100996750A0A140TA64 210 aa10.47□□□□□ -0.73
CCDC39-202ENST00000471307 A0A1W2PPZ6 126 aa10.47□□□□□ -0.73
CCDC39-202ENST00000471307 SOX1O00570 391 aaPredicted RBP10.47□□□□□ -0.73
CCDC39-202ENST00000471307 GLB1P16278 677 aa10.47□□□□□ -0.73
CCDC39-202ENST00000471307 TMC7Q7Z402 723 aa10.47□□□□□ -0.73
CCDC39-202ENST00000471307 KRTAP4-6Q9BYQ5 205 aa10.47□□□□□ -0.73
CCDC39-202ENST00000471307 NPHS2Q9NP85 383 aa10.47□□□□□ -0.73
CCDC39-202ENST00000471307 DDX3YO15523 660 aaKnown RBP10.46□□□□□ -0.73
CCDC39-202ENST00000471307 ESRRAP11474 423 aaPredicted RBP10.46□□□□□ -0.73
CCDC39-202ENST00000471307 PRR23CQ6ZRP0 262 aa10.46□□□□□ -0.73
CCDC39-202ENST00000471307 CCDC74AQ96AQ1 378 aa10.46□□□□□ -0.73
CCDC39-202ENST00000471307 CSRNP1Q96S65 589 aa10.46□□□□□ -0.73
CCDC39-202ENST00000471307 RNF208Q9H0X6 261 aa10.46□□□□□ -0.73
CCDC39-202ENST00000471307 CLEC4MQ9H2X3 399 aaPredicted RBP10.46□□□□□ -0.73
CCDC39-202ENST00000471307 IVNS1ABPQ9Y6Y0 642 aa10.46□□□□□ -0.73
CCDC39-202ENST00000471307 PTPN12Q05209 780 aaKnown RBP10.45□□□□□ -0.74
CCDC39-202ENST00000471307 PRSS36Q5K4E3 855 aa10.45□□□□□ -0.74
CCDC39-202ENST00000471307 SLC51AQ86UW1 340 aa10.45□□□□□ -0.74
CCDC39-202ENST00000471307 EHD4Q9H223 541 aa10.45□□□□□ -0.74
CCDC39-202ENST00000471307 METTL12A8MUP2 240 aa10.44□□□□□ -0.74
CCDC39-202ENST00000471307 MAPK1P28482 360 aa10.44□□□□□ -0.74
CCDC39-202ENST00000471307 NLRP12P59046 1061 aa10.44□□□□□ -0.74
CCDC39-202ENST00000471307 ANKRD34AQ69YU3 496 aa10.44□□□□□ -0.74
CCDC39-202ENST00000471307 PRPF40BQ6NWY9 871 aaKnown RBP10.44□□□□□ -0.74
CCDC39-202ENST00000471307 UBASH3BQ8TF42 649 aa10.44□□□□□ -0.74
CCDC39-202ENST00000471307 TRAK1Q9UPV9 953 aa10.44□□□□□ -0.74
CCDC39-202ENST00000471307 MEGF11A6BM72 1044 aa10.43□□□□□ -0.74
CCDC39-202ENST00000471307 TREHO43280 583 aa10.43□□□□□ -0.74
CCDC39-202ENST00000471307 ITPKAP23677 461 aa10.43□□□□□ -0.74
CCDC39-202ENST00000471307 GRIA4P48058 902 aa10.43□□□□□ -0.74
CCDC39-202ENST00000471307 UBL7Q96S82 380 aaPredicted RBP10.43□□□□□ -0.74
CCDC39-202ENST00000471307 PCDH1Q08174 1060 aa10.42□□□□□ -0.74
CCDC39-202ENST00000471307 DSC3Q14574 896 aa10.42□□□□□ -0.74
CCDC39-202ENST00000471307 FAM46AQ96IP4 442 aaKnown RBP10.42□□□□□ -0.74
CCDC39-202ENST00000471307 RUSC1Q9BVN2 902 aa10.42□□□□□ -0.74
CCDC39-202ENST00000471307 DHX15O43143 795 aaKnown RBP10.41□□□□□ -0.74
CCDC39-202ENST00000471307 HGSNATQ68CP4 663 aa10.41□□□□□ -0.74
CCDC39-202ENST00000471307 ZSCAN29Q8IWY8 852 aaPredicted RBP10.41□□□□□ -0.74
CCDC39-202ENST00000471307 PLCB3Q01970 1234 aa10.4□□□□□ -0.74
CCDC39-202ENST00000471307 SPRED3Q2MJR0 410 aa10.4□□□□□ -0.74
CCDC39-202ENST00000471307 DDX54Q8TDD1 881 aaKnown RBP10.4□□□□□ -0.74
CCDC39-202ENST00000471307 ZNF576Q9H609 170 aa10.4□□□□□ -0.74
CCDC39-202ENST00000471307 GADD45BO75293 160 aaPredicted RBP10.39□□□□□ -0.75
CCDC39-202ENST00000471307 RPS26P11Q5JNZ5 115 aaPredicted RBP10.39□□□□□ -0.75
CCDC39-202ENST00000471307 ZMYM1Q5SVZ6 1142 aa10.39□□□□□ -0.75
CCDC39-202ENST00000471307 FDX2Q6P4F2 183 aa10.39□□□□□ -0.75
CCDC39-202ENST00000471307 UTP4Q969X6 686 aaKnown RBP10.39□□□□□ -0.75
CCDC39-202ENST00000471307 ZFYVE1Q9HBF4 777 aa10.39□□□□□ -0.75
CCDC39-202ENST00000471307 NLRP2Q9NX02 1062 aa10.39□□□□□ -0.75
CCDC39-202ENST00000471307 RAXQ9Y2V3 346 aa10.39□□□□□ -0.75
CCDC39-202ENST00000471307 LOC100289279A0A1B0GTE1 492 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 B3GALT4O96024 378 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 CYP11A1P05108 521 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 GSTM4Q03013 218 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 ZNF423Q2M1K9 1284 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 HP1BP3Q5SSJ5 553 aaPredicted RBP10.38□□□□□ -0.75
CCDC39-202ENST00000471307 ARMC10Q8N2F6 343 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 MYRFLQ96LU7 910 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 TMPRSS13Q9BYE2 586 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 NRSN2Q9GZP1 204 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 SUGCTQ9HAC7 445 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 CYP4F12Q9HCS2 524 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 ABCB6Q9NP58 842 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 HIF3AQ9Y2N7 669 aa10.38□□□□□ -0.75
CCDC39-202ENST00000471307 GSC2O15499 205 aa10.37□□□□□ -0.75
CCDC39-202ENST00000471307 SART1O43290 800 aaKnown RBP10.37□□□□□ -0.75
CCDC39-202ENST00000471307 ENOX2Q16206 610 aaKnown RBP10.37□□□□□ -0.75
CCDC39-202ENST00000471307 NUTM2GQ5VZR2 741 aa10.37□□□□□ -0.75
CCDC39-202ENST00000471307 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.37□□□□□ -0.75
CCDC39-202ENST00000471307 ASB16Q96NS5 453 aa10.37□□□□□ -0.75
CCDC39-202ENST00000471307 USP26Q9BXU7 913 aa10.37□□□□□ -0.75
CCDC39-202ENST00000471307 PPP4R2Q9NY27 417 aa10.37□□□□□ -0.75
CCDC39-202ENST00000471307 TMEM238LA0A1B0GVL6 79 aa10.36□□□□□ -0.75
CCDC39-202ENST00000471307 GRM2Q14416 872 aa10.36□□□□□ -0.75
CCDC39-202ENST00000471307 EXOSC6Q5RKV6 272 aaKnown RBP10.36□□□□□ -0.75
CCDC39-202ENST00000471307 SMG8Q8ND04 991 aaKnown RBP10.36□□□□□ -0.75
CCDC39-202ENST00000471307 EPS8L3Q8TE67 593 aaKnown RBP10.36□□□□□ -0.75
CCDC39-202ENST00000471307 FBF1Q8TES7 1133 aa10.36□□□□□ -0.75
CCDC39-202ENST00000471307 XRCC5P13010 732 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms