RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 TSPAN10Q9H1Z9 355 aaPredicted RBP3.71□□□□□ -1.82
CCNL1-214ENST00000471247 SETD1BQ9UPS6 1966 aaKnown RBP3.71□□□□□ -1.82
CCNL1-214ENST00000471247 KANK1Q14678 1352 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 THBS1P07996 1170 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 BRD2P25440 801 aaKnown RBP3.71□□□□□ -1.82
CCNL1-214ENST00000471247 INPP5BP32019 993 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 EHHADHQ08426 723 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 CCDC27Q2M243 656 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 TTC9Q92623 222 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 MPHOSPH9Q99550 1183 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 NIFKQ9BYG3 293 aaKnown RBP3.71□□□□□ -1.82
CCNL1-214ENST00000471247 NAP1L2Q9ULW6 460 aaPredicted RBP3.71□□□□□ -1.82
CCNL1-214ENST00000471247 RAB15P59190 212 aa3.7□□□□□ -1.82
CCNL1-214ENST00000471247 LINC00528Q8N1L1 170 aa3.7□□□□□ -1.82
CCNL1-214ENST00000471247 PUS7Q96PZ0 661 aaKnown RBP3.7□□□□□ -1.82
CCNL1-214ENST00000471247 WASF2Q9Y6W5 498 aa3.7□□□□□ -1.82
CCNL1-214ENST00000471247 KTN1Q86UP2 1357 aaKnown RBP3.7□□□□□ -1.82
CCNL1-214ENST00000471247 A0A1B0GTH6 734 aa3.7□□□□□ -1.82
CCNL1-214ENST00000471247 DDX10Q13206 875 aaKnown RBP3.7□□□□□ -1.82
CCNL1-214ENST00000471247 PPIP5K1Q6PFW1 1433 aa3.7□□□□□ -1.82
CCNL1-214ENST00000471247 GRNP28799 593 aaKnown RBP3.69□□□□□ -1.82
CCNL1-214ENST00000471247 C4orf17Q53FE4 359 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 TAF7LQ5H9L4 462 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 MRPL14Q6P1L8 145 aaKnown RBP3.69□□□□□ -1.82
CCNL1-214ENST00000471247 CYLDQ9NQC7 956 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 PRDM10Q9NQV6 1147 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 METTL5Q9NRN9 209 aaKnown RBP3.69□□□□□ -1.82
CCNL1-214ENST00000471247 NHSQ6T4R5 1651 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 DISP3Q9P2K9 1392 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 MYH15Q9Y2K3 1946 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 LTBP1Q14766 1721 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 KIF4AO95239 1232 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 ALDH1A1P00352 501 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 RBM25P49756 843 aaKnown RBP3.69□□□□□ -1.82
CCNL1-214ENST00000471247 FAM26DQ5JW98 314 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 PRPF40BQ6NWY9 871 aaKnown RBP3.69□□□□□ -1.82
CCNL1-214ENST00000471247 TRMT2AQ8IZ69 625 aaKnown RBP3.69□□□□□ -1.82
CCNL1-214ENST00000471247 SCG3Q8WXD2 468 aaKnown RBP3.69□□□□□ -1.82
CCNL1-214ENST00000471247 OPLAHO14841 1288 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 PDGFAP04085 211 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 TNNT3P45378 269 aaPredicted RBP3.69□□□□□ -1.82
CCNL1-214ENST00000471247 DAB2P98082 770 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 ARID5BQ14865 1188 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 KIAA0319Q5VV43 1072 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 SLC43A3Q8NBI5 491 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 THSD7AQ9UPZ6 1657 aa3.69□□□□□ -1.82
CCNL1-214ENST00000471247 PMEPA1Q969W9 287 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 ZSCAN10Q96SZ4 725 aaPredicted RBP3.68□□□□□ -1.82
CCNL1-214ENST00000471247 IBTKQ9P2D0 1353 aaPredicted RBP3.68□□□□□ -1.82
CCNL1-214ENST00000471247 PDE3BQ13370 1112 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 CDCA8Q53HL2 280 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 TMC4Q7Z404 712 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 ALDH16A1Q8IZ83 802 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 KCNQ5Q9NR82 932 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 AAASQ9NRG9 546 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 AHDC1Q5TGY3 1603 aaPredicted RBP3.68□□□□□ -1.82
CCNL1-214ENST00000471247 PLEKHG2Q9H7P9 1386 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 UNCXA6NJT0 531 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 MSX1P28360 303 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 SOX18P35713 384 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 WDR4P57081 412 aaKnown RBP3.68□□□□□ -1.82
CCNL1-214ENST00000471247 FOXC1Q12948 553 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 AAMPQ13685 434 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 TLR1Q15399 786 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 SUSD3Q96L08 255 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 PRIMPOLQ96LW4 560 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 ZFAND3Q9H8U3 227 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 SENP2Q9HC62 589 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 OVOS2A0A0J9YW53 1432 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 OVOS2Q6IE36 1432 aa3.68□□□□□ -1.82
CCNL1-214ENST00000471247 DOCK2Q92608 1830 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 PRMT3O60678 531 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 ST13P50502 369 aaKnown RBP3.67□□□□□ -1.82
CCNL1-214ENST00000471247 MLECQ14165 292 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 PDE12Q6L8Q7 609 aaKnown RBP3.67□□□□□ -1.82
CCNL1-214ENST00000471247 SAP130Q9H0E3 1048 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 KCNMB2Q9Y691 235 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 ARFGEF2Q9Y6D5 1785 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 NRXN2Q9P2S2 1712 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 PRPF40AO75400 957 aaKnown RBP3.67□□□□□ -1.82
CCNL1-214ENST00000471247 NCLP19338 710 aaKnown RBP3.67□□□□□ -1.82
CCNL1-214ENST00000471247 MARSP56192 900 aaKnown RBP3.67□□□□□ -1.82
CCNL1-214ENST00000471247 CBLBQ13191 982 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 TRIM22Q8IYM9 498 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 TRIM47Q96LD4 638 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 NLRP3Q96P20 1036 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 SPEF2Q9C093 1822 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 TNFRSF10AO00220 468 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.67□□□□□ -1.826e-6■□□□□ 8.6
CCNL1-214ENST00000471247 GNASQ5JWF2 1037 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 LYSMD3Q7Z3D4 306 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 TMC7Q7Z402 723 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 GALNT12Q8IXK2 581 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 ETFBKMTQ8IXQ9 262 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 CACTIN-AS1Q8N1I8 211 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 L3MBTL2Q969R5 705 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 CACNA2D2Q9NY47 1150 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 CHMP3Q9Y3E7 222 aa3.67□□□□□ -1.82
CCNL1-214ENST00000471247 ECM29Q5VYK3 1845 aa3.66□□□□□ -1.82
CCNL1-214ENST00000471247 KAT6BQ8WYB5 2073 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms