RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 SLC34A2O95436 690 aa11.13□□□□□ -0.63
PTPRE-207ENST00000471218 SDSP20132 328 aa11.13□□□□□ -0.63
PTPRE-207ENST00000471218 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
PTPRE-207ENST00000471218 WASHC4Q2M389 1173 aa11.13□□□□□ -0.63
PTPRE-207ENST00000471218 PI4K2BQ8TCG2 481 aa11.13□□□□□ -0.63
PTPRE-207ENST00000471218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPRE-207ENST00000471218 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
PTPRE-207ENST00000471218 TBC1D32Q96NH3 1257 aa11.13□□□□□ -0.63
PTPRE-207ENST00000471218 SAGE1Q9NXZ1 904 aa11.13□□□□□ -0.63
PTPRE-207ENST00000471218 PA2G4Q9UQ80 394 aaKnown RBP11.13□□□□□ -0.63
PTPRE-207ENST00000471218 MROH5Q6ZUA9 1318 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 APBB1O00213 710 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 RAD17O75943 681 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 TNNI3KQ59H18 835 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 TAF7LQ5H9L4 462 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 AACSQ86V21 672 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 OTUD7AQ8TE49 926 aaPredicted RBP11.12□□□□□ -0.63
PTPRE-207ENST00000471218 CDC5LQ99459 802 aaKnown RBP11.12□□□□□ -0.63
PTPRE-207ENST00000471218 GLIS2Q9BZE0 524 aaPredicted RBP11.12□□□□□ -0.63
PTPRE-207ENST00000471218 IL1RAPL2Q9NP60 686 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 CEP126Q9P2H0 1117 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 FPGT-TNNI3KV9GXZ4 949 aa11.12□□□□□ -0.63
PTPRE-207ENST00000471218 ZNF609O15014 1411 aa11.11□□□□□ -0.63
PTPRE-207ENST00000471218 G3V3G9 751 aa11.11□□□□□ -0.63
PTPRE-207ENST00000471218 ATP5JP18859 108 aa11.11□□□□□ -0.63
PTPRE-207ENST00000471218 ITGA6P23229 1130 aa11.11□□□□□ -0.63
PTPRE-207ENST00000471218 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
PTPRE-207ENST00000471218 HUNKP57058 714 aa11.11□□□□□ -0.63
PTPRE-207ENST00000471218 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
PTPRE-207ENST00000471218 EAF2Q96CJ1 260 aaPredicted RBP11.11□□□□□ -0.63
PTPRE-207ENST00000471218 EVI5LQ96CN4 794 aa11.11□□□□□ -0.63
PTPRE-207ENST00000471218 ZNF512BQ96KM6 892 aaPredicted RBP11.11□□□□□ -0.63
PTPRE-207ENST00000471218 ZNF408Q9H9D4 720 aa11.11□□□□□ -0.63
PTPRE-207ENST00000471218 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
PTPRE-207ENST00000471218 RAD50Q92878 1312 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 MYH3P11055 1940 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 AOC2O75106 756 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 HCLS1P14317 486 aaPredicted RBP11.1□□□□□ -0.63
PTPRE-207ENST00000471218 LRRFIP1Q32MZ4 808 aaKnown RBP11.1□□□□□ -0.63
PTPRE-207ENST00000471218 RGMBQ6NW40 437 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 C3orf67Q6ZVT6 689 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 KRT26Q7Z3Y9 468 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 SULF1Q8IWU6 871 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 ZC3H12CQ9C0D7 883 aaKnown RBP11.1□□□□□ -0.63
PTPRE-207ENST00000471218 MCOLN1Q9GZU1 580 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 NSFL1CQ9UNZ2 370 aaKnown RBP11.1□□□□□ -0.63
PTPRE-207ENST00000471218 RIPOR2Q9Y4F9 1068 aa11.1□□□□□ -0.63
PTPRE-207ENST00000471218 THSD7BQ9C0I4 1608 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 C6orf229H3BNL8 230 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 IGSF3O75054 1194 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 MMP14P50281 582 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 FKBP1BP68106 108 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPRE-207ENST00000471218 TFCP2Q12800 502 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 DGKZQ13574 1117 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 LDHAL6AQ6ZMR3 332 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 RUFY2Q8WXA3 655 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 SIL1Q9H173 461 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 GREM2Q9H772 168 aa11.09□□□□□ -0.63
PTPRE-207ENST00000471218 GBA2Q9HCG7 927 aaPredicted RBP11.09□□□□□ -0.63
PTPRE-207ENST00000471218 COL4A5P29400 1685 aa11.08□□□□□ -0.64
PTPRE-207ENST00000471218 SPEF2Q9C093 1822 aa11.08□□□□□ -0.64
PTPRE-207ENST00000471218 IGHMBP2P38935 993 aaKnown RBP11.08□□□□□ -0.64
PTPRE-207ENST00000471218 ZNF157P51786 506 aaPredicted RBP11.08□□□□□ -0.64
PTPRE-207ENST00000471218 HIRAP54198 1017 aaPredicted RBP11.08□□□□□ -0.64
PTPRE-207ENST00000471218 RPS8P62241 208 aaKnown RBP11.08□□□□□ -0.64
PTPRE-207ENST00000471218 TMED8Q6PL24 325 aaPredicted RBP11.08□□□□□ -0.64
PTPRE-207ENST00000471218 IL17RAQ96F46 866 aa11.08□□□□□ -0.64
PTPRE-207ENST00000471218 SNRKQ9NRH2 765 aa11.08□□□□□ -0.64
PTPRE-207ENST00000471218 DBNLQ9UJU6 430 aaKnown RBP11.08□□□□□ -0.64
PTPRE-207ENST00000471218 LTBP1Q14766 1721 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 PSMD14O00487 310 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 PDE8BO95263 885 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 CHMLP26374 656 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 PUM3Q15397 648 aaKnown RBP11.07□□□□□ -0.64
PTPRE-207ENST00000471218 PKN2Q16513 984 aaKnown RBP11.07□□□□□ -0.64
PTPRE-207ENST00000471218 VGLL2Q8N8G2 317 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 AGBL3Q8NEM8 1001 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 KLHDC4Q8TBB5 520 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 TRPM4Q8TD43 1214 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 JARID2Q92833 1246 aaPredicted RBP11.07□□□□□ -0.64
PTPRE-207ENST00000471218 IPO9Q96P70 1041 aaKnown RBP11.07□□□□□ -0.64
PTPRE-207ENST00000471218 MPHOSPH8Q99549 860 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 HAUS7Q99871 368 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 C22orf23Q9BZE7 217 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 CNNM1Q9NRU3 951 aa11.07□□□□□ -0.64
PTPRE-207ENST00000471218 DDX60Q8IY21 1712 aaKnown RBP11.06□□□□□ -0.64
PTPRE-207ENST00000471218 YDJCA8MPS7 323 aa11.06□□□□□ -0.64
PTPRE-207ENST00000471218 VIL1P09327 827 aaKnown RBP11.06□□□□□ -0.64
PTPRE-207ENST00000471218 ANAPC15P60006 121 aa11.06□□□□□ -0.64
PTPRE-207ENST00000471218 RTL5Q5HYW3 569 aaPredicted RBP11.06□□□□□ -0.64
PTPRE-207ENST00000471218 METTL24Q5JXM2 366 aa11.06□□□□□ -0.64
PTPRE-207ENST00000471218 CCDC158Q5M9N0 1113 aa11.06□□□□□ -0.64
PTPRE-207ENST00000471218 LPIN2Q92539 896 aa11.06□□□□□ -0.64
PTPRE-207ENST00000471218 ESYT1Q9BSJ8 1104 aa11.06□□□□□ -0.64
PTPRE-207ENST00000471218 BSDC1Q9NW68 430 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms