RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 NOB1Q9ULX3 412 aaKnown RBP19.33■□□□□ 0.68
CNOT3-206ENST00000471126 COL6A3P12111 3177 aa19.32■□□□□ 0.68
CNOT3-206ENST00000471126 RBBP6Q7Z6E9 1792 aaKnown RBP19.32■□□□□ 0.68
CNOT3-206ENST00000471126 MANSC4A6NHS7 340 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-206ENST00000471126 CSF1RP07333 972 aa19.32■□□□□ 0.68
CNOT3-206ENST00000471126 CAP1Q01518 475 aa19.32■□□□□ 0.68
CNOT3-206ENST00000471126 NBPF9Q3BBW0 867 aa19.32■□□□□ 0.68
CNOT3-206ENST00000471126 ARMC9Q7Z3E5 817 aa19.32■□□□□ 0.68
CNOT3-206ENST00000471126 API5Q9BZZ5 524 aaKnown RBP19.32■□□□□ 0.68
CNOT3-206ENST00000471126 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-206ENST00000471126 IGF2BP3O00425 579 aaKnown RBP eCLIP19.31■□□□□ 0.68
CNOT3-206ENST00000471126 BCAR3O75815 825 aa19.31■□□□□ 0.68
CNOT3-206ENST00000471126 MYCP01106 439 aaPredicted RBP19.31■□□□□ 0.68
CNOT3-206ENST00000471126 CCDC152Q4G0S7 254 aa19.31■□□□□ 0.68
CNOT3-206ENST00000471126 LDLRAD1Q5T700 205 aa19.31■□□□□ 0.68
CNOT3-206ENST00000471126 DPF3Q92784 378 aa19.31■□□□□ 0.68
CNOT3-206ENST00000471126 GMLQ99445 158 aa19.31■□□□□ 0.68
CNOT3-206ENST00000471126 FOXO4P98177 505 aa19.3■□□□□ 0.68
CNOT3-206ENST00000471126 SLC4A10Q6U841 1118 aa19.3■□□□□ 0.68
CNOT3-206ENST00000471126 NBPF11Q86T75 865 aa19.3■□□□□ 0.68
CNOT3-206ENST00000471126 ZNF609O15014 1411 aa19.3■□□□□ 0.68
CNOT3-206ENST00000471126 SP3Q02447 781 aa19.29■□□□□ 0.68
CNOT3-206ENST00000471126 SLC9C1Q4G0N8 1177 aa19.29■□□□□ 0.68
CNOT3-206ENST00000471126 KAZALD1Q96I82 304 aa19.29■□□□□ 0.68
CNOT3-206ENST00000471126 WTIPA6NIX2 430 aaPredicted RBP19.28■□□□□ 0.68
CNOT3-206ENST00000471126 NBPF7P0C2Y1 421 aaPredicted RBP19.28■□□□□ 0.68
CNOT3-206ENST00000471126 TRIM27P14373 513 aa19.28■□□□□ 0.68
CNOT3-206ENST00000471126 CCT4P50991 539 aaKnown RBP19.28■□□□□ 0.68
CNOT3-206ENST00000471126 CRHR2Q13324 411 aa19.28■□□□□ 0.68
CNOT3-206ENST00000471126 SLC10A4Q96EP9 437 aa19.28■□□□□ 0.68
CNOT3-206ENST00000471126 USP44Q9H0E7 712 aa19.28■□□□□ 0.68
CNOT3-206ENST00000471126 PRO3102Q9H379 93 aa19.28■□□□□ 0.68
CNOT3-206ENST00000471126 SEC31BQ9NQW1 1179 aa19.28■□□□□ 0.68
CNOT3-206ENST00000471126 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
CNOT3-206ENST00000471126 CUL9Q8IWT3 2517 aa19.27■□□□□ 0.68
CNOT3-206ENST00000471126 RPS8P62241 208 aaKnown RBP19.27■□□□□ 0.68
CNOT3-206ENST00000471126 ATF7IPQ6VMQ6 1270 aa19.27■□□□□ 0.68
CNOT3-206ENST00000471126 GREM2Q9H772 168 aa19.27■□□□□ 0.68
CNOT3-206ENST00000471126 FZD1Q9UP38 647 aa19.27■□□□□ 0.68
CNOT3-206ENST00000471126 PTCH2Q9Y6C5 1203 aa19.27■□□□□ 0.68
CNOT3-206ENST00000471126 CEP290O15078 2479 aa19.26■□□□□ 0.67
CNOT3-206ENST00000471126 IPO8O15397 1037 aaKnown RBP19.26■□□□□ 0.67
CNOT3-206ENST00000471126 RABL6Q3YEC7 729 aaPredicted RBP19.26■□□□□ 0.67
CNOT3-206ENST00000471126 EPHA10Q5JZY3 1008 aa19.26■□□□□ 0.67
CNOT3-206ENST00000471126 C9orf78Q9NZ63 289 aaPredicted RBP19.26■□□□□ 0.67
CNOT3-206ENST00000471126 RANBP2P49792 3224 aaKnown RBP19.26■□□□□ 0.67
CNOT3-206ENST00000471126 SOX1O00570 391 aaPredicted RBP19.25■□□□□ 0.67
CNOT3-206ENST00000471126 SPEF2Q9C093 1822 aa19.24■□□□□ 0.67
CNOT3-206ENST00000471126 WNT10BO00744 389 aa19.24■□□□□ 0.67
CNOT3-206ENST00000471126 UFL1O94874 794 aa19.24■□□□□ 0.67
CNOT3-206ENST00000471126 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
CNOT3-206ENST00000471126 LRCH3Q96II8 777 aa19.24■□□□□ 0.67
CNOT3-206ENST00000471126 CDC5LQ99459 802 aaKnown RBP19.24■□□□□ 0.67
CNOT3-206ENST00000471126 PODXL2Q9NZ53 605 aa19.24■□□□□ 0.67
CNOT3-206ENST00000471126 SCN9AQ15858 1988 aa19.24■□□□□ 0.67
CNOT3-206ENST00000471126 USP17L3A6NCW0 530 aa19.23■□□□□ 0.67
CNOT3-206ENST00000471126 USP17L4A6NCW7 530 aa19.23■□□□□ 0.67
CNOT3-206ENST00000471126 ZBTB48P10074 688 aaPredicted RBP19.23■□□□□ 0.67
CNOT3-206ENST00000471126 OTUD7BQ6GQQ9 843 aa19.23■□□□□ 0.67
CNOT3-206ENST00000471126 USP17L1Q7RTZ2 530 aa19.23■□□□□ 0.67
CNOT3-206ENST00000471126 WNK4Q96J92 1243 aa19.23■□□□□ 0.67
CNOT3-206ENST00000471126 CCDC85AQ96PX6 553 aaPredicted RBP19.23■□□□□ 0.67
CNOT3-206ENST00000471126 BSDC1Q9NW68 430 aaPredicted RBP19.23■□□□□ 0.67
CNOT3-206ENST00000471126 A0A1B0GUL6 1792 aa19.23■□□□□ 0.67
CNOT3-206ENST00000471126 ITGA6P23229 1130 aa19.22■□□□□ 0.67
CNOT3-206ENST00000471126 ZKSCAN2Q63HK3 967 aa19.22■□□□□ 0.67
CNOT3-206ENST00000471126 ANKRD18AQ8IVF6 992 aa19.22■□□□□ 0.67
CNOT3-206ENST00000471126 ANKRD44Q8N8A2 993 aa19.22■□□□□ 0.67
CNOT3-206ENST00000471126 CLMNQ96JQ2 1002 aa19.22■□□□□ 0.67
CNOT3-206ENST00000471126 COL25A1Q9BXS0 654 aaPredicted RBP19.22■□□□□ 0.67
CNOT3-206ENST00000471126 ANKIB1Q9P2G1 1089 aa19.22■□□□□ 0.67
CNOT3-206ENST00000471126 GGA1Q9UJY5 639 aa19.22■□□□□ 0.67
CNOT3-206ENST00000471126 TNNQ9UQP3 1299 aa19.22■□□□□ 0.67
CNOT3-206ENST00000471126 LMBR1LQ6UX01 489 aa19.21■□□□□ 0.67
CNOT3-206ENST00000471126 SH3TC2Q8TF17 1288 aa19.21■□□□□ 0.67
CNOT3-206ENST00000471126 SASH1O94885 1247 aa19.2■□□□□ 0.66
CNOT3-206ENST00000471126 ARHGEF6Q15052 776 aa19.2■□□□□ 0.66
CNOT3-206ENST00000471126 OGFOD1Q8N543 542 aa19.2■□□□□ 0.66
CNOT3-206ENST00000471126 PTPN18Q99952 460 aa19.2■□□□□ 0.66
CNOT3-206ENST00000471126 MXD3Q9BW11 206 aa19.2■□□□□ 0.66
CNOT3-206ENST00000471126 BICC1Q9H694 974 aaKnown RBP19.2■□□□□ 0.66
CNOT3-206ENST00000471126 FRAT1Q92837 279 aaPredicted RBP19.19■□□□□ 0.66
CNOT3-206ENST00000471126 ANKRD18BA2A2Z9 1011 aa19.18■□□□□ 0.66
CNOT3-206ENST00000471126 IFIT5Q13325 482 aaKnown RBP19.18■□□□□ 0.66
CNOT3-206ENST00000471126 MAP3K11Q16584 847 aa19.18■□□□□ 0.66
CNOT3-206ENST00000471126 PODNQ7Z5L7 613 aa19.18■□□□□ 0.66
CNOT3-206ENST00000471126 SHISA4Q96DD7 197 aa19.18■□□□□ 0.66
CNOT3-206ENST00000471126 RCAN3Q9UKA8 241 aa19.18■□□□□ 0.66
CNOT3-206ENST00000471126 MINPP1Q9UNW1 487 aa19.18■□□□□ 0.66
CNOT3-206ENST00000471126 A0A1W2PPC1 479 aa19.17■□□□□ 0.66
CNOT3-206ENST00000471126 GJA5P36382 358 aa19.17■□□□□ 0.66
CNOT3-206ENST00000471126 APOBEC3FQ8IUX4 373 aaKnown RBP19.17■□□□□ 0.66
CNOT3-206ENST00000471126 MEIS3Q99687 375 aa19.17■□□□□ 0.66
CNOT3-206ENST00000471126 NR2E3Q9Y5X4 410 aa19.17■□□□□ 0.66
CNOT3-206ENST00000471126 XDHP47989 1333 aa19.17■□□□□ 0.66
CNOT3-206ENST00000471126 RLBP1P12271 317 aa19.16■□□□□ 0.66
CNOT3-206ENST00000471126 IGHMBP2P38935 993 aaKnown RBP19.16■□□□□ 0.66
CNOT3-206ENST00000471126 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
CNOT3-206ENST00000471126 HTATIP2Q9BUP3 242 aa19.16■□□□□ 0.66
CNOT3-206ENST00000471126 TESPA1A2RU30 521 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms