RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 SPATA5Q8NB90 893 aa35.2■■■■□ 3.23
SOD1-203ENST00000470944 EDC3Q96F86 508 aaKnown RBP35.2■■■■□ 3.23
SOD1-203ENST00000470944 DNAJC2Q99543 621 aaKnown RBP35.2■■■■□ 3.23
SOD1-203ENST00000470944 HAUS7Q99871 368 aa35.2■■■■□ 3.23
SOD1-203ENST00000470944 ZAP70P43403 619 aa35.2■■■■□ 3.23
SOD1-203ENST00000470944 YDJCA8MPS7 323 aa35.18■■■■□ 3.22
SOD1-203ENST00000470944 PODNQ7Z5L7 613 aa35.18■■■■□ 3.22
SOD1-203ENST00000470944 SEMA3EO15041 775 aa35.18■■■■□ 3.22
SOD1-203ENST00000470944 CHAF1AQ13111 956 aaPredicted RBP35.18■■■■□ 3.22
SOD1-203ENST00000470944 DENND2AQ9ULE3 1009 aa35.18■■■■□ 3.22
SOD1-203ENST00000470944 AKAP11Q9UKA4 1901 aa35.17■■■■□ 3.22
SOD1-203ENST00000470944 ANTXR1Q9H6X2 564 aa35.17■■■■□ 3.22
SOD1-203ENST00000470944 GRIN3BO60391 1043 aa35.16■■■■□ 3.22
SOD1-203ENST00000470944 LMNB1P20700 586 aa35.16■■■■□ 3.22
SOD1-203ENST00000470944 NIM1KQ8IY84 436 aa35.16■■■■□ 3.22
SOD1-203ENST00000470944 CHD4Q14839 1912 aa35.16■■■■□ 3.22
SOD1-203ENST00000470944 CYP2E1P05181 493 aaPredicted RBP35.15■■■■□ 3.22
SOD1-203ENST00000470944 GOLIM4O00461 696 aa35.15■■■■□ 3.22
SOD1-203ENST00000470944 ZBTB22O15209 634 aa35.15■■■■□ 3.22
SOD1-203ENST00000470944 GTF2IP78347 998 aa35.14■■■■□ 3.22
SOD1-203ENST00000470944 TBC1D9Q6ZT07 1266 aa35.14■■■■□ 3.22
SOD1-203ENST00000470944 PAG1Q9NWQ8 432 aa35.14■■■■□ 3.22
SOD1-203ENST00000470944 JDP2Q8WYK2 163 aa35.13■■■■□ 3.21
SOD1-203ENST00000470944 ZNRF3Q9ULT6 936 aa35.13■■■■□ 3.21
SOD1-203ENST00000470944 SCN9AQ15858 1988 aa35.12■■■■□ 3.21
SOD1-203ENST00000470944 PDS5AQ29RF7 1337 aaKnown RBP35.11■■■■□ 3.21
SOD1-203ENST00000470944 TRIM6-TRIM34B2RNG4 842 aa35.11■■■■□ 3.21
SOD1-203ENST00000470944 SDSP20132 328 aa35.11■■■■□ 3.21
SOD1-203ENST00000470944 FBXW7Q969H0 707 aa35.11■■■■□ 3.21
SOD1-203ENST00000470944 PIH1D3Q9NQM4 214 aaKnown RBP35.11■■■■□ 3.21
SOD1-203ENST00000470944 FAM205AQ6ZU69 1335 aa35.11■■■■□ 3.21
SOD1-203ENST00000470944 BMP2KLQ5H9B9 411 aa35.1■■■■□ 3.21
SOD1-203ENST00000470944 TTLL5Q6EMB2 1281 aa35.1■■■■□ 3.21
SOD1-203ENST00000470944 MXD3Q9BW11 206 aa35.1■■■■□ 3.21
SOD1-203ENST00000470944 SBF1O95248 1867 aa35.1■■■■□ 3.21
SOD1-203ENST00000470944 CCDC88AQ3V6T2 1871 aa35.1■■■■□ 3.21
SOD1-203ENST00000470944 RAD17O75943 681 aa35.09■■■■□ 3.21
SOD1-203ENST00000470944 RILPL2Q969X0 211 aa35.09■■■■□ 3.21
SOD1-203ENST00000470944 RNF181Q9P0P0 153 aa35.09■■■■□ 3.21
SOD1-203ENST00000470944 MYH13Q9UKX3 1938 aa35.09■■■■□ 3.21
SOD1-203ENST00000470944 C9orf131Q5VYM1 1079 aa35.07■■■■□ 3.2
SOD1-203ENST00000470944 ABCF2Q9UG63 623 aa35.07■■■■□ 3.2
SOD1-203ENST00000470944 USP17L3A6NCW0 530 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 USP17L4A6NCW7 530 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 GRIK5Q16478 980 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 STRIP1Q5VSL9 837 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 USP17L1Q7RTZ2 530 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 CERS5Q8N5B7 392 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 WDR66Q8TBY9 1149 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 FZD9O00144 591 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 CXCL9Q07325 125 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 DACT2Q5SW24 774 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 EVI5LQ96CN4 794 aa35.06■■■■□ 3.2
SOD1-203ENST00000470944 MFSD14BQ5SR56 506 aa35.05■■■■□ 3.2
SOD1-203ENST00000470944 SALL1Q9NSC2 1324 aa35.04■■■■□ 3.2
SOD1-203ENST00000470944 CNTROBQ8N137 903 aa35.04■■■■□ 3.2
SOD1-203ENST00000470944 PSMD14O00487 310 aa35.03■■■■□ 3.2
SOD1-203ENST00000470944 PRDX5P30044 214 aa35.03■■■■□ 3.2
SOD1-203ENST00000470944 KBTBD3Q8NAB2 608 aa35.03■■■■□ 3.2
SOD1-203ENST00000470944 ZNF646O15015 1829 aaPredicted RBP35.03■■■■□ 3.2
SOD1-203ENST00000470944 CHGBP05060 677 aa35.03■■■■□ 3.2
SOD1-203ENST00000470944 TTF1Q15361 905 aaPredicted RBP35.03■■■■□ 3.2
SOD1-203ENST00000470944 ZNF541Q9H0D2 1346 aa35.01■■■■□ 3.2
SOD1-203ENST00000470944 IDH1O75874 414 aaKnown RBP35.01■■■■□ 3.2
SOD1-203ENST00000470944 TBC1D22AQ8WUA7 517 aa35.01■■■■□ 3.2
SOD1-203ENST00000470944 FSD1Q9BTV5 496 aa35.01■■■■□ 3.2
SOD1-203ENST00000470944 DICER1Q9UPY3 1922 aaKnown RBP35.01■■■■□ 3.19
SOD1-203ENST00000470944 LRP2BPQ9P2M1 347 aa35.01■■■■□ 3.19
SOD1-203ENST00000470944 VIL1P09327 827 aaKnown RBP35■■■■□ 3.19
SOD1-203ENST00000470944 CIAPIN1Q6FI81 312 aa35■■■■□ 3.19
SOD1-203ENST00000470944 SLFNL1Q499Z3 407 aa34.99■■■■□ 3.19
SOD1-203ENST00000470944 MYO5AQ9Y4I1 1855 aaKnown RBP34.99■■■■□ 3.19
SOD1-203ENST00000470944 EIF6P56537 245 aaKnown RBP34.98■■■■□ 3.19
SOD1-203ENST00000470944 ZBTB12Q9Y330 459 aaPredicted RBP34.98■■■■□ 3.19
SOD1-203ENST00000470944 ZGPATQ8N5A5 531 aaKnown RBP34.98■■■■□ 3.19
SOD1-203ENST00000470944 ZNF384Q8TF68 577 aa34.98■■■■□ 3.19
SOD1-203ENST00000470944 RAI14Q9P0K7 980 aa34.98■■■■□ 3.19
SOD1-203ENST00000470944 PSME4Q14997 1843 aa34.97■■■■□ 3.19
SOD1-203ENST00000470944 TIAM2Q8IVF5 1701 aa34.97■■■■□ 3.19
SOD1-203ENST00000470944 RSBN1LQ6PCB5 846 aaPredicted RBP34.97■■■■□ 3.19
SOD1-203ENST00000470944 ERICH6Q7L0X2 663 aa34.97■■■■□ 3.19
SOD1-203ENST00000470944 LDHBP07195 334 aaKnown RBP34.96■■■■□ 3.19
SOD1-203ENST00000470944 FKBP1AP62942 108 aaKnown RBP34.96■■■■□ 3.19
SOD1-203ENST00000470944 DOCK2Q92608 1830 aa34.95■■■■□ 3.19
SOD1-203ENST00000470944 F8W031 263 aaPredicted RBP34.95■■■■□ 3.19
SOD1-203ENST00000470944 MECOMQ03112 1051 aa34.95■■■■□ 3.18
SOD1-203ENST00000470944 MAP3K12Q12852 859 aa34.95■■■■□ 3.18
SOD1-203ENST00000470944 DCAF8L1A6NGE4 600 aa34.94■■■■□ 3.18
SOD1-203ENST00000470944 TNIP1Q15025 636 aa34.94■■■■□ 3.18
SOD1-203ENST00000470944 SLC9C2Q5TAH2 1124 aa34.94■■■■□ 3.18
SOD1-203ENST00000470944 SPTY2D1Q68D10 685 aaPredicted RBP34.94■■■■□ 3.18
SOD1-203ENST00000470944 KIAA0825Q8IV33 1275 aa34.94■■■■□ 3.18
SOD1-203ENST00000470944 NSUN4Q96CB9 384 aaKnown RBP34.94■■■■□ 3.18
SOD1-203ENST00000470944 GJA3Q9Y6H8 435 aa34.94■■■■□ 3.18
SOD1-203ENST00000470944 MAGEB6Q8N7X4 407 aa34.93■■■■□ 3.18
SOD1-203ENST00000470944 GMLQ99445 158 aa34.93■■■■□ 3.18
SOD1-203ENST00000470944 PDE6AP16499 860 aa34.92■■■■□ 3.18
SOD1-203ENST00000470944 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.92■■■■□ 3.18
SOD1-203ENST00000470944 ADD2P35612 726 aa34.91■■■■□ 3.18
SOD1-203ENST00000470944 DZIP1Q86YF9 867 aaKnown RBP34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms