RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 WNT8BQ93098 351 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 RUSC1Q9BVN2 902 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 TRAIPQ9BWF2 469 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 OSBPL1AQ9BXW6 950 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 PBX4Q9BYU1 374 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 ADAM19Q9H013 955 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 SEPT3Q9UH03 358 aa5.02□□□□□ -1.61
UBXN4-206ENST00000470687 PRMT3O60678 531 aa5.01□□□□□ -1.61
UBXN4-206ENST00000470687 NLRP12P59046 1061 aa5.01□□□□□ -1.61
UBXN4-206ENST00000470687 POP1Q99575 1024 aaKnown RBP5.01□□□□□ -1.61
UBXN4-206ENST00000470687 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
UBXN4-206ENST00000470687 OSGEPQ9NPF4 335 aa5.01□□□□□ -1.61
UBXN4-206ENST00000470687 FAM177BA6PVY3 158 aa5□□□□□ -1.61
UBXN4-206ENST00000470687 TTC39BQ5VTQ0 682 aaPredicted RBP5□□□□□ -1.61
UBXN4-206ENST00000470687 SHISA5Q8N114 240 aa5□□□□□ -1.61
UBXN4-206ENST00000470687 CEP120Q8N960 986 aa5□□□□□ -1.61
UBXN4-206ENST00000470687 FAM200AQ8TCP9 573 aa5□□□□□ -1.61
UBXN4-206ENST00000470687 PIK3R5Q8WYR1 880 aa5□□□□□ -1.61
UBXN4-206ENST00000470687 CXXC1Q9P0U4 656 aaPredicted RBP5□□□□□ -1.61
UBXN4-206ENST00000470687 MEGF11A6BM72 1044 aa4.99□□□□□ -1.61
UBXN4-206ENST00000470687 TNFRSF10BO14763 440 aa4.99□□□□□ -1.61
UBXN4-206ENST00000470687 CYP2E1P05181 493 aaPredicted RBP4.99□□□□□ -1.61
UBXN4-206ENST00000470687 BRD2P25440 801 aaKnown RBP4.99□□□□□ -1.61
UBXN4-206ENST00000470687 TRIM26Q12899 539 aaPredicted RBP4.99□□□□□ -1.61
UBXN4-206ENST00000470687 ABI2Q9NYB9 513 aaPredicted RBP4.99□□□□□ -1.61
UBXN4-206ENST00000470687 RXRBP28702 533 aa4.98□□□□□ -1.61
UBXN4-206ENST00000470687 CABP4P57796 275 aa4.98□□□□□ -1.61
UBXN4-206ENST00000470687 SWI5Q1ZZU3 235 aa4.98□□□□□ -1.61
UBXN4-206ENST00000470687 C16orf46Q6P387 395 aa4.98□□□□□ -1.61
UBXN4-206ENST00000470687 NCAPG2Q86XI2 1143 aa4.98□□□□□ -1.61
UBXN4-206ENST00000470687 FLCNQ8NFG4 579 aa4.98□□□□□ -1.61
UBXN4-206ENST00000470687 METTL22Q9BUU2 404 aaPredicted RBP4.98□□□□□ -1.61
UBXN4-206ENST00000470687 PAK6Q9NQU5 681 aaPredicted RBP4.98□□□□□ -1.61
UBXN4-206ENST00000470687 BSDC1Q9NW68 430 aaPredicted RBP4.98□□□□□ -1.61
UBXN4-206ENST00000470687 FAM13BQ9NYF5 915 aa4.98□□□□□ -1.61
UBXN4-206ENST00000470687 FNDC3AQ9Y2H6 1198 aaKnown RBP4.98□□□□□ -1.61
UBXN4-206ENST00000470687 ZBTB39O15060 712 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 CYP26A1O43174 497 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 TIAF1O95411 115 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 PAPLNO95428 1278 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 FBLN7Q53RD9 439 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 ZNF648Q5T619 568 aaPredicted RBP4.97□□□□□ -1.61
UBXN4-206ENST00000470687 SPOCD1Q6ZMY3 1216 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 AGBL5Q8NDL9 886 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 SLC7A3Q8WY07 619 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 TMPRSS13Q9BYE2 586 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 USTQ9Y2C2 406 aa4.97□□□□□ -1.61
UBXN4-206ENST00000470687 FAM95CA0A1B0GW59 222 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 IGHA2P01877 340 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 ADMP35318 185 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 ZAP70P43403 619 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 SERPINB4P48594 390 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 MTMR3Q13615 1198 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 NFKBIBQ15653 356 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 NUTM2GQ5VZR2 741 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 HGSNATQ68CP4 663 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 PAOXQ6QHF9 649 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 SMG8Q8ND04 991 aaKnown RBP4.96□□□□□ -1.62
UBXN4-206ENST00000470687 SUGCTQ9HAC7 445 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 KANSL3Q9P2N6 904 aa4.96□□□□□ -1.62
UBXN4-206ENST00000470687 DBX1A6NMT0 343 aa4.95□□□□□ -1.62
UBXN4-206ENST00000470687 NFKBIEO00221 500 aa4.95□□□□□ -1.62
UBXN4-206ENST00000470687 ACPPP15309 386 aa4.95□□□□□ -1.62
UBXN4-206ENST00000470687 ATP2B4P23634 1241 aa4.95□□□□□ -1.62
UBXN4-206ENST00000470687 C19orf57Q0VDD7 668 aa4.95□□□□□ -1.62
UBXN4-206ENST00000470687 ZNF124Q15973 351 aa4.95□□□□□ -1.62
UBXN4-206ENST00000470687 ZAR1Q86SH2 424 aa4.95□□□□□ -1.62
UBXN4-206ENST00000470687 C12orf50Q8NA57 414 aaPredicted RBP4.95□□□□□ -1.62
UBXN4-206ENST00000470687 GPR152Q8TDT2 470 aa4.95□□□□□ -1.62
UBXN4-206ENST00000470687 SOX13Q9UN79 622 aa4.95□□□□□ -1.62
UBXN4-206ENST00000470687 ARL4DP49703 201 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 CDPF1Q6NVV7 123 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 FBLIM1Q8WUP2 373 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 TBC1D32Q96NH3 1257 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 MKNK1Q9BUB5 465 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 KRTAP4-5Q9BYR2 181 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 CYP4F12Q9HCS2 524 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 TMEM63CQ9P1W3 806 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 PRKAG2Q9UGJ0 569 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 SALL4Q9UJQ4 1053 aa4.94□□□□□ -1.62
UBXN4-206ENST00000470687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.94□□□□□ -1.62
UBXN4-206ENST00000470687 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.94□□□□□ -1.62
UBXN4-206ENST00000470687 LOC100289279A0A1B0GTE1 492 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 FAM170BA6NMN3 283 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 PDE2AO00408 941 aaPredicted RBP4.93□□□□□ -1.62
UBXN4-206ENST00000470687 DLGAP3O95886 979 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 NAA30Q147X3 362 aaPredicted RBP4.93□□□□□ -1.62
UBXN4-206ENST00000470687 CARMIL2Q6F5E8 1435 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 PDE12Q6L8Q7 609 aaKnown RBP4.93□□□□□ -1.62
UBXN4-206ENST00000470687 C2CD4AQ8NCU7 369 aaPredicted RBP4.93□□□□□ -1.62
UBXN4-206ENST00000470687 EZH1Q92800 747 aaPredicted RBP4.93□□□□□ -1.62
UBXN4-206ENST00000470687 GATA6Q92908 595 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 HHIPQ96QV1 700 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 USP26Q9BXU7 913 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 ELP3Q9H9T3 547 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 DZANK1Q9NVP4 752 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 CNTN3Q9P232 1028 aa4.93□□□□□ -1.62
UBXN4-206ENST00000470687 ZC3H7BQ9UGR2 993 aaKnown RBP4.93□□□□□ -1.62
UBXN4-206ENST00000470687 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
UBXN4-206ENST00000470687 TRPA1O75762 1119 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms