RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 PROM2Q8N271 834 aa20.1■□□□□ 0.81
SMARCD3-206ENST00000470588 TFCP2L1Q9NZI6 479 aa20.1■□□□□ 0.81
SMARCD3-206ENST00000470588 ATP6V1DQ9Y5K8 247 aa20.1■□□□□ 0.81
SMARCD3-206ENST00000470588 AKAP11Q9UKA4 1901 aa20.09■□□□□ 0.81
SMARCD3-206ENST00000470588 UBE3CQ15386 1083 aa20.09■□□□□ 0.81
SMARCD3-206ENST00000470588 PI16Q6UXB8 463 aa20.09■□□□□ 0.81
SMARCD3-206ENST00000470588 Q6ZUG5 572 aa20.09■□□□□ 0.81
SMARCD3-206ENST00000470588 STOX1Q6ZVD7 989 aa20.09■□□□□ 0.81
SMARCD3-206ENST00000470588 ANKRD18AQ8IVF6 992 aa20.09■□□□□ 0.81
SMARCD3-206ENST00000470588 FLAD1Q8NFF5 587 aa20.09■□□□□ 0.81
SMARCD3-206ENST00000470588 TCEANC2Q96MN5 208 aa20.09■□□□□ 0.81
SMARCD3-206ENST00000470588 EXOSC10Q01780 885 aaKnown RBP20.08■□□□□ 0.81
SMARCD3-206ENST00000470588 NFIXQ14938 502 aa20.08■□□□□ 0.81
SMARCD3-206ENST00000470588 CNBD1Q8NA66 436 aa20.08■□□□□ 0.81
SMARCD3-206ENST00000470588 ARAP2Q8WZ64 1704 aa20.08■□□□□ 0.8
SMARCD3-206ENST00000470588 E7EWF7 191 aa20.08■□□□□ 0.8
SMARCD3-206ENST00000470588 MBD3O95983 291 aa20.08■□□□□ 0.8
SMARCD3-206ENST00000470588 NCLP19338 710 aaKnown RBP20.08■□□□□ 0.8
SMARCD3-206ENST00000470588 PDCP20941 246 aa20.08■□□□□ 0.8
SMARCD3-206ENST00000470588 MRE11P49959 708 aa20.08■□□□□ 0.8
SMARCD3-206ENST00000470588 PIH1D3Q9NQM4 214 aaKnown RBP20.08■□□□□ 0.8
SMARCD3-206ENST00000470588 F13A1P00488 732 aa20.07■□□□□ 0.8
SMARCD3-206ENST00000470588 GYS1P13807 737 aa20.07■□□□□ 0.8
SMARCD3-206ENST00000470588 SLC9C2Q5TAH2 1124 aa20.07■□□□□ 0.8
SMARCD3-206ENST00000470588 PUS7LQ9H0K6 701 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-206ENST00000470588 IMMTQ16891 758 aaKnown RBP20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 SPATA5Q8NB90 893 aa20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 AGXT2Q9BYV1 514 aa20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 MTMR6Q9Y217 621 aa20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 GPAA1O43292 621 aa20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 FGAP02671 866 aa20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 ST5P78524 1137 aa20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 LARP1BQ659C4 914 aaKnown RBP20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 GPT2Q8TD30 523 aa20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 CHMP4CQ96CF2 233 aa20.06■□□□□ 0.8
SMARCD3-206ENST00000470588 MYH7P12883 1935 aa20.05■□□□□ 0.8
SMARCD3-206ENST00000470588 FGD1P98174 961 aa20.05■□□□□ 0.8
SMARCD3-206ENST00000470588 CHRNDQ07001 517 aa20.05■□□□□ 0.8
SMARCD3-206ENST00000470588 FBXL16Q8N461 479 aa20.05■□□□□ 0.8
SMARCD3-206ENST00000470588 TMEM87AQ8NBN3 555 aa20.05■□□□□ 0.8
SMARCD3-206ENST00000470588 AKT1S1Q96B36 256 aa20.05■□□□□ 0.8
SMARCD3-206ENST00000470588 CHAMP1Q96JM3 812 aa20.05■□□□□ 0.8
SMARCD3-206ENST00000470588 FOXP2O15409 715 aa20.04■□□□□ 0.8
SMARCD3-206ENST00000470588 XRCC6P12956 609 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMARCD3-206ENST00000470588 ZNF445P59923 1031 aa20.04■□□□□ 0.8
SMARCD3-206ENST00000470588 GTF3C6Q969F1 213 aa20.04■□□□□ 0.8
SMARCD3-206ENST00000470588 BSDC1Q9NW68 430 aaPredicted RBP20.04■□□□□ 0.8
SMARCD3-206ENST00000470588 IDH1O75874 414 aaKnown RBP20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 PDE6AP16499 860 aa20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 ZNF827Q17R98 1081 aa20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 TTLL5Q6EMB2 1281 aa20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 CAVIN1Q6NZI2 390 aaKnown RBP20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 C3orf67Q6ZVT6 689 aa20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 BRF1Q92994 677 aa20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 LLPHQ9BRT6 129 aaKnown RBP20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 PFKFB2O60825 505 aa20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 MAP3K12Q12852 859 aa20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 USP48Q86UV5 1035 aa20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 GRPEL1Q9HAV7 217 aa20.03■□□□□ 0.8
SMARCD3-206ENST00000470588 ZNF532Q9HCE3 1301 aa20.02■□□□□ 0.8
SMARCD3-206ENST00000470588 TNRC6CQ9HCJ0 1690 aaKnown RBP20.02■□□□□ 0.8
SMARCD3-206ENST00000470588 A0A1B0GUL6 1792 aa20.02■□□□□ 0.8
SMARCD3-206ENST00000470588 A0A0G2JLW4 131 aa20.02■□□□□ 0.8
SMARCD3-206ENST00000470588 TCRBV5S4A2TA0A5A2 114 aa20.02■□□□□ 0.8
SMARCD3-206ENST00000470588 STK3Q13188 491 aa20.02■□□□□ 0.8
SMARCD3-206ENST00000470588 SF3B2Q13435 895 aaKnown RBP20.02■□□□□ 0.8
SMARCD3-206ENST00000470588 RASGRF1Q13972 1273 aa20.02■□□□□ 0.8
SMARCD3-206ENST00000470588 UBE4AQ14139 1066 aa20.02■□□□□ 0.8
SMARCD3-206ENST00000470588 EP400Q96L91 3159 aa20.02■□□□□ 0.79
SMARCD3-206ENST00000470588 ZNF213O14771 459 aa20.01■□□□□ 0.79
SMARCD3-206ENST00000470588 SERPINB2P05120 415 aa20.01■□□□□ 0.79
SMARCD3-206ENST00000470588 TM4SF1P30408 202 aa20.01■□□□□ 0.79
SMARCD3-206ENST00000470588 CSPP1Q1MSJ5 1256 aa20.01■□□□□ 0.79
SMARCD3-206ENST00000470588 GAS2L3Q86XJ1 694 aa20.01■□□□□ 0.79
SMARCD3-206ENST00000470588 ZNF274Q96GC6 653 aaPredicted RBP20.01■□□□□ 0.79
SMARCD3-206ENST00000470588 LAMA4Q16363 1823 aa20.01■□□□□ 0.79
SMARCD3-206ENST00000470588 SNAP23O00161 211 aa20■□□□□ 0.79
SMARCD3-206ENST00000470588 BCAMP50895 628 aa20■□□□□ 0.79
SMARCD3-206ENST00000470588 ALX1Q15699 326 aa20■□□□□ 0.79
SMARCD3-206ENST00000470588 ZSCAN23Q3MJ62 389 aa20■□□□□ 0.79
SMARCD3-206ENST00000470588 PRR5LQ6MZQ0 368 aa20■□□□□ 0.79
SMARCD3-206ENST00000470588 NLGN1Q8N2Q7 840 aa20■□□□□ 0.79
SMARCD3-206ENST00000470588 RPS8P62241 208 aaKnown RBP20■□□□□ 0.79
SMARCD3-206ENST00000470588 CCDC24Q8N4L8 307 aa20■□□□□ 0.79
SMARCD3-206ENST00000470588 LRRC2Q9BYS8 371 aa20■□□□□ 0.79
SMARCD3-206ENST00000470588 GNL3LQ9NVN8 582 aaKnown RBP20■□□□□ 0.79
SMARCD3-206ENST00000470588 WWC3Q9ULE0 1092 aa20■□□□□ 0.79
SMARCD3-206ENST00000470588 TAF1P21675 1872 aa19.99■□□□□ 0.79
SMARCD3-206ENST00000470588 VPS37CA5D8V6 355 aaPredicted RBP19.99■□□□□ 0.79
SMARCD3-206ENST00000470588 EVCP57679 992 aa19.99■□□□□ 0.79
SMARCD3-206ENST00000470588 FOXD4L6Q3SYB3 417 aaPredicted RBP19.99■□□□□ 0.79
SMARCD3-206ENST00000470588 FOXD4L3Q6VB84 417 aaPredicted RBP19.99■□□□□ 0.79
SMARCD3-206ENST00000470588 STRBPQ96SI9 672 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-206ENST00000470588 WDR19Q8NEZ3 1342 aa19.99■□□□□ 0.79
SMARCD3-206ENST00000470588 MCM5P33992 734 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 SCRN1Q12765 414 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 NCOA7Q8NI08 942 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 SMARCC2Q8TAQ2 1214 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 RPGRQ92834 1020 aaKnown RBP19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 CELF1Q92879 486 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms