RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 NBPF6Q5VWK0 638 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 CCDC129Q6ZRS4 1044 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 TOGARAM2Q6ZUX3 1019 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 HDXQ7Z353 690 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 NBPF4Q96M43 638 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 ADGRL3Q9HAR2 1447 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 TLR7Q9NYK1 1049 aaKnown RBP10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 HIP1O00291 1037 aa10.98□□□□□ -0.65
NHLRC3-203ENST00000470258 WDHD1O75717 1129 aaPredicted RBP10.98□□□□□ -0.65
NHLRC3-203ENST00000470258 ADKP55263 362 aaKnown RBP10.98□□□□□ -0.65
NHLRC3-203ENST00000470258 CNNM3Q8NE01 707 aa10.98□□□□□ -0.65
NHLRC3-203ENST00000470258 RNF216Q9NWF9 866 aaPredicted RBP10.98□□□□□ -0.65
NHLRC3-203ENST00000470258 ARHGAP23Q9P227 1491 aa10.98□□□□□ -0.65
NHLRC3-203ENST00000470258 RSRC2Q7L4I2 434 aaKnown RBP10.98□□□□□ -0.65
NHLRC3-203ENST00000470258 TXNDC2Q86VQ3 553 aa10.98□□□□□ -0.65
NHLRC3-203ENST00000470258 BAG1Q99933 345 aaPredicted RBP10.98□□□□□ -0.65
NHLRC3-203ENST00000470258 WASLO00401 505 aaPredicted RBP10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 ARHGAP6O43182 974 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 CHGBP05060 677 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 TEFQ10587 303 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 DHX8Q14562 1220 aaKnown RBP10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 CHST3Q7LGC8 479 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 RABEP2Q9H5N1 569 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 AKAP2Q9Y2D5 859 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 CBFA2T2O43439 604 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 ERLIN1O75477 346 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 NLRP12P59046 1061 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 NCAPHQ15003 741 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 ABCB6Q9NP58 842 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 SLC52A1Q9NWF4 448 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 ARHGEF10O15013 1369 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 TFRCP02786 760 aaKnown RBP10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 MNAT1P51948 309 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 BRD3Q15059 726 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 PLPPR3Q6T4P5 718 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 IQUBQ8NA54 791 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 NSUN7Q8NE18 718 aaKnown RBP10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 DNAAF4Q8WXU2 420 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 CLIC4Q9Y696 253 aa10.97□□□□□ -0.65
NHLRC3-203ENST00000470258 ZNF202O95125 648 aa10.96□□□□□ -0.65
NHLRC3-203ENST00000470258 G3BP1Q13283 466 aaKnown RBP eCLIP10.96□□□□□ -0.65
NHLRC3-203ENST00000470258 TSGA10IPQ3SY00 556 aa10.96□□□□□ -0.65
NHLRC3-203ENST00000470258 EAF2Q96CJ1 260 aaPredicted RBP10.96□□□□□ -0.65
NHLRC3-203ENST00000470258 LTV1Q96GA3 475 aaPredicted RBP10.96□□□□□ -0.65
NHLRC3-203ENST00000470258 PNKPQ96T60 521 aa10.96□□□□□ -0.65
NHLRC3-203ENST00000470258 FAM204AQ9H8W3 233 aa10.96□□□□□ -0.65
NHLRC3-203ENST00000470258 HMG20BQ9P0W2 317 aa10.96□□□□□ -0.65
NHLRC3-203ENST00000470258 MARCKSP29966 332 aaPredicted RBP10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 LIG3P49916 1009 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 KRT32Q14532 448 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 NAA16Q6N069 864 aaPredicted RBP10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 LRRC31Q6UY01 552 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 CHPF2Q9P2E5 772 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 CORO7P57737 925 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 KIF4BQ2VIQ3 1234 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 ADALQ6DHV7 355 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 RAB11FIP4Q86YS3 637 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 FANCLQ9NW38 375 aa10.96□□□□□ -0.66
NHLRC3-203ENST00000470258 CPS1P31327 1500 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 NPHP4O75161 1426 aaPredicted RBP10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 MAP2K7O14733 419 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 MYL5Q02045 173 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 MTF1Q14872 753 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 CT47A1Q5JQC4 288 aaPredicted RBP10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 BEND6Q5SZJ8 279 aaPredicted RBP10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 CCDC91Q7Z6B0 441 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 BANK1Q8NDB2 785 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 MKRN1Q9UHC7 482 aaKnown RBP10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 TAF5LO75529 589 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 AMPHP49418 695 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 SYNE3Q6ZMZ3 975 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 VSTM4Q8IW00 320 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 CPLX3Q8WVH0 158 aa10.95□□□□□ -0.66
NHLRC3-203ENST00000470258 SPTLC2O15270 562 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 OLFM4Q6UX06 510 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 SRGAP1Q7Z6B7 1085 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 GDAP1L1Q96MZ0 367 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 USP42Q9H9J4 1324 aaKnown RBP10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 GOLGA6L9A6NEM1 432 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 GNAT3A8MTJ3 354 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 CTDNEP1O95476 244 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 CYP21A2P08686 494 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 PSEN1P49768 467 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 CASP8Q14790 479 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 MCTP2Q6DN12 878 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 MMS22LQ6ZRQ5 1243 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 ANKZF1Q9H8Y5 726 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 GJB4Q9NTQ9 266 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 PFKFB1P16118 471 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 PNOCQ13519 176 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 DNAJC21Q5F1R6 531 aaKnown RBP10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 TADA2BQ86TJ2 420 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 KIFC2Q96AC6 838 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 BPIFA3Q9BQP9 254 aa10.94□□□□□ -0.66
NHLRC3-203ENST00000470258 MRPL44Q9H9J2 332 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms