RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 SPACA7Q96KW9 195 aa6.68□□□□□ -1.34
SRRM1-208ENST00000470243 AVENQ9NQS1 362 aaPredicted RBP6.68□□□□□ -1.34
SRRM1-208ENST00000470243 METTL5Q9NRN9 209 aaKnown RBP6.68□□□□□ -1.34
SRRM1-208ENST00000470243 SMARCA2P51531 1590 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 FBXO24O75426 580 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 HOXB4P17483 251 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-208ENST00000470243 ITGB7P26010 798 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 RAD51AP2Q09MP3 1159 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 SPRED3Q2MJR0 410 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 ADAMTSL4Q6UY14 1074 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 DTHD1Q6ZMT9 781 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 ALYREFQ86V81 257 aaKnown RBP6.67□□□□□ -1.34
SRRM1-208ENST00000470243 NT5DC4Q86YG4 428 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 MDFIQ99750 246 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 PBX4Q9BYU1 374 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 BHLHE41Q9C0J9 482 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-208ENST00000470243 SEMA6BQ9H3T3 888 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 GGA1Q9UJY5 639 aa6.67□□□□□ -1.34
SRRM1-208ENST00000470243 TTF2Q9UNY4 1162 aaKnown RBP6.67□□□□□ -1.34
SRRM1-208ENST00000470243 PDE2AO00408 941 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-208ENST00000470243 CHRNA4P43681 627 aa6.66□□□□□ -1.34
SRRM1-208ENST00000470243 DOC2BQ14184 412 aa6.66□□□□□ -1.34
SRRM1-208ENST00000470243 TAF1CQ15572 869 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-208ENST00000470243 PERM1Q5SV97 790 aa6.66□□□□□ -1.34
SRRM1-208ENST00000470243 TMEM102Q8N9M5 508 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-208ENST00000470243 ASAP3Q8TDY4 903 aa6.66□□□□□ -1.34
SRRM1-208ENST00000470243 NXPE3Q969Y0 559 aa6.66□□□□□ -1.34
SRRM1-208ENST00000470243 GDF2Q9UK05 429 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-208ENST00000470243 AKAP2Q9Y2D5 859 aa6.66□□□□□ -1.34
SRRM1-208ENST00000470243 USP31Q70CQ4 1352 aa6.66□□□□□ -1.34
SRRM1-208ENST00000470243 ADARB2-AS1A8MUL3 147 aa6.65□□□□□ -1.34
SRRM1-208ENST00000470243 ST13P50502 369 aaKnown RBP6.65□□□□□ -1.34
SRRM1-208ENST00000470243 PCSK7Q16549 785 aa6.65□□□□□ -1.34
SRRM1-208ENST00000470243 CEP135Q66GS9 1140 aa6.65□□□□□ -1.34
SRRM1-208ENST00000470243 GOLGA6L1Q8N7Z2 621 aa6.65□□□□□ -1.34
SRRM1-208ENST00000470243 PLD4Q96BZ4 506 aa6.65□□□□□ -1.34
SRRM1-208ENST00000470243 POP1Q99575 1024 aaKnown RBP6.65□□□□□ -1.34
SRRM1-208ENST00000470243 LPIN3Q9BQK8 851 aa6.65□□□□□ -1.34
SRRM1-208ENST00000470243 SMG9Q9H0W8 520 aaKnown RBP6.65□□□□□ -1.34
SRRM1-208ENST00000470243 RBSNQ9H1K0 784 aa6.65□□□□□ -1.34
SRRM1-208ENST00000470243 TRIM33Q9UPN9 1127 aa6.65□□□□□ -1.34
SRRM1-208ENST00000470243 PCDHGB7Q9Y5F8 929 aa6.65□□□□□ -1.34
SRRM1-208ENST00000470243 A0A096LPE4 126 aa6.64□□□□□ -1.35
SRRM1-208ENST00000470243 A0A1W2PPZ6 126 aa6.64□□□□□ -1.35
SRRM1-208ENST00000470243 SMNDC1O75940 238 aaKnown RBP eCLIP6.64□□□□□ -1.35
SRRM1-208ENST00000470243 ITPKAP23677 461 aa6.64□□□□□ -1.35
SRRM1-208ENST00000470243 ZNF394Q53GI3 561 aa6.64□□□□□ -1.35
SRRM1-208ENST00000470243 SLCO4C1Q6ZQN7 724 aa6.64□□□□□ -1.35
SRRM1-208ENST00000470243 HS2ST1Q7LGA3 356 aa6.64□□□□□ -1.35
SRRM1-208ENST00000470243 TRIM56Q9BRZ2 755 aaKnown RBP6.64□□□□□ -1.35
SRRM1-208ENST00000470243 MUC3BQ9H195 1237 aa6.64□□□□□ -1.35
SRRM1-208ENST00000470243 PPP4R2Q9NY27 417 aa6.64□□□□□ -1.35
SRRM1-208ENST00000470243 ELOA3CA0A087WX78 387 aaPredicted RBP6.63□□□□□ -1.35
SRRM1-208ENST00000470243 ELOA3DA6NLF2 546 aaPredicted RBP6.63□□□□□ -1.35
SRRM1-208ENST00000470243 F6X3S4 739 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 GNB5O14775 395 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 PTPN12Q05209 780 aaKnown RBP6.63□□□□□ -1.35
SRRM1-208ENST00000470243 ELOA3BQ3SY89 546 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 ZMYM1Q5SVZ6 1142 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 PSAPL1Q6NUJ1 521 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 ELMSAN1Q6PJG2 1045 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 TPTE2Q6XPS3 522 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 MICALL1Q8N3F8 863 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 ELOA3Q8NG57 546 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 BTBD6Q96KE9 485 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 LACRTQ9GZZ8 138 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 ZNF576Q9H609 170 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 COPRSQ9NQ92 184 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 GGT7Q9UJ14 662 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 PPM1HQ9ULR3 514 aa6.63□□□□□ -1.35
SRRM1-208ENST00000470243 CELA3AP09093 270 aa6.62□□□□□ -1.35
SRRM1-208ENST00000470243 XRCC5P13010 732 aaKnown RBP6.62□□□□□ -1.35
SRRM1-208ENST00000470243 ZC3H6P61129 1189 aaKnown RBP6.62□□□□□ -1.35
SRRM1-208ENST00000470243 FAAP100Q0VG06 881 aa6.62□□□□□ -1.35
SRRM1-208ENST00000470243 CCDC85BQ15834 202 aaPredicted RBP6.62□□□□□ -1.35
SRRM1-208ENST00000470243 USP48Q86UV5 1035 aa6.62□□□□□ -1.35
SRRM1-208ENST00000470243 KRTAP1-3Q8IUG1 177 aa6.62□□□□□ -1.35
SRRM1-208ENST00000470243 NUDT8Q8WV74 236 aa6.62□□□□□ -1.35
SRRM1-208ENST00000470243 ACBD3Q9H3P7 528 aa6.62□□□□□ -1.35
SRRM1-208ENST00000470243 CCSER2Q9H7U1 834 aa6.62□□□□□ -1.35
SRRM1-208ENST00000470243 STARD13Q9Y3M8 1113 aa6.62□□□□□ -1.35
SRRM1-208ENST00000470243 IGSF3O75054 1194 aa6.61□□□□□ -1.35
SRRM1-208ENST00000470243 EPXP11678 715 aa6.61□□□□□ -1.35
SRRM1-208ENST00000470243 MAP3K11Q16584 847 aa6.61□□□□□ -1.35
SRRM1-208ENST00000470243 NAALADL2Q58DX5 795 aa6.61□□□□□ -1.35
SRRM1-208ENST00000470243 GDF6Q6KF10 455 aaPredicted RBP6.61□□□□□ -1.35
SRRM1-208ENST00000470243 ERMP1Q7Z2K6 904 aa6.61□□□□□ -1.35
SRRM1-208ENST00000470243 C8orf37Q96NL8 207 aa6.61□□□□□ -1.35
SRRM1-208ENST00000470243 TGIF2Q9GZN2 237 aa6.61□□□□□ -1.35
SRRM1-208ENST00000470243 FRRS1LQ9P0K9 344 aa6.61□□□□□ -1.35
SRRM1-208ENST00000470243 SOX13Q9UN79 622 aa6.61□□□□□ -1.35
SRRM1-208ENST00000470243 ALBP02768 609 aa6.6□□□□□ -1.35
SRRM1-208ENST00000470243 PTPRAP18433 802 aa6.6□□□□□ -1.35
SRRM1-208ENST00000470243 TNNI2P48788 182 aa6.6□□□□□ -1.35
SRRM1-208ENST00000470243 RACK1P63244 317 aaKnown RBP6.6□□□□□ -1.35
SRRM1-208ENST00000470243 BSNDQ8WZ55 320 aa6.6□□□□□ -1.35
SRRM1-208ENST00000470243 NOC4LQ9BVI4 516 aaKnown RBP6.6□□□□□ -1.35
SRRM1-208ENST00000470243 JPH1Q9HDC5 661 aaPredicted RBP6.6□□□□□ -1.35
SRRM1-208ENST00000470243 SH2B1Q9NRF2 756 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms