RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 SFI1A8K8P3 1242 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 ZBTB7BO15156 539 aaPredicted RBP6.01□□□□□ -1.45
COL3A1-205ENST00000470167 KRT38O76015 456 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 TNNT1P13805 278 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 ENPP1P22413 925 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 SCTRP47872 440 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 SLC7A5Q01650 507 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 RAD51AP2Q09MP3 1159 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 PRPF4BQ13523 1007 aaKnown RBP6.01□□□□□ -1.45
COL3A1-205ENST00000470167 ARID5BQ14865 1188 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 ACBD5Q5T8D3 534 aaPredicted RBP6.01□□□□□ -1.45
COL3A1-205ENST00000470167 DUSP27Q5VZP5 1158 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 CCDC102BQ68D86 513 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 TTLL5Q6EMB2 1281 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 RPUSD2Q8IZ73 545 aaKnown RBP6.01□□□□□ -1.45
COL3A1-205ENST00000470167 MYRIPQ8NFW9 859 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 FAXDC2Q96IV6 333 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 TTC14Q96N46 770 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 GBP4Q96PP9 640 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 PPP1R9BQ96SB3 815 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 COMMD8Q9NX08 183 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 TMCC3Q9ULS5 477 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 TRAK1Q9UPV9 953 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 MAP4K5Q9Y4K4 846 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 PCDHGA11Q9Y5H2 935 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 TLL2Q9Y6L7 1015 aa6.01□□□□□ -1.45
COL3A1-205ENST00000470167 IBTKQ9P2D0 1353 aaPredicted RBP6.01□□□□□ -1.45
COL3A1-205ENST00000470167 ERVH48-1M5A8F1 160 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 ZSCAN9O15535 394 aaPredicted RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 E2F6O75461 281 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 LGR5O75473 907 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 REC8O95072 547 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 FGAP02671 866 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 LDHCP07864 332 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 MMEP08473 750 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 ZNF24P17028 368 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 ATP2B4P23634 1241 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 FSHRP23945 695 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 MAP2K2P36507 400 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 SCNN1AP37088 669 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 RPIAP49247 311 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 TBX4P57082 545 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 DEUP1Q05D60 604 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 KRT72Q14CN4 511 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 TERF2Q15554 542 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 MAPRE1Q15691 268 aaKnown RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 SWI5Q1ZZU3 235 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 ALDH1L2Q3SY69 923 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 PREPLQ4J6C6 727 aaPredicted RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 PARP10Q53GL7 1025 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 SYNE3Q6ZMZ3 975 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 LIAT1Q6ZQX7 453 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 MYLK4Q86YV6 388 aaPredicted RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 CLASRPQ8N2M8 674 aaKnown RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 PDCL2Q8N4E4 241 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 EMID1Q96A84 441 aaPredicted RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 NACC2Q96BF6 587 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 CENPTQ96BT3 561 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 IL17RAQ96F46 866 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 CDK5RAP3Q96JB5 506 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 MPP4Q96JB8 637 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 SPACA7Q96KW9 195 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 PRIMPOLQ96LW4 560 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 ALDH8A1Q9H2A2 487 aaPredicted RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 UPF2Q9HAU5 1272 aaKnown RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 CPSF2Q9P2I0 782 aaKnown RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 RABL2AQ9UBK7 228 aaPredicted RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 CLIP2Q9UDT6 1046 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 MAFFQ9ULX9 164 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 GNEQ9Y223 722 aaKnown RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 LZTS1Q9Y250 596 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 ATP8A1Q9Y2Q0 1164 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 R3HCC1Q9Y3T6 440 aaKnown RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 N6AMT1Q9Y5N5 214 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 IKBKGQ9Y6K9 419 aa6□□□□□ -1.45
COL3A1-205ENST00000470167 BRD4O60885 1362 aaPredicted RBP6□□□□□ -1.45
COL3A1-205ENST00000470167 A0A1B0GUL7 405 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 TLDC2A0PJX2 215 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 FAM25EA8MYX2 175 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 BOLA2-SMG1P6H3BVE0 249 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 PRMT3O60678 531 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 PPFIA3O75145 1194 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 FRAT2O75474 233 aaPredicted RBP5.99□□□□□ -1.45
COL3A1-205ENST00000470167 LMNB1P20700 586 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 CHMLP26374 656 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 PRPHP41219 470 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 SEC13P55735 322 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 POU5F1BQ06416 359 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 SFSWAPQ12872 951 aaKnown RBP5.99□□□□□ -1.45
COL3A1-205ENST00000470167 GRIK3Q13003 919 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 USP4Q13107 963 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 RC3H1Q5TC82 1133 aaKnown RBP5.99□□□□□ -1.45
COL3A1-205ENST00000470167 LEKR1Q6ZMV7 388 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 NDUFAF2Q8N183 169 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 KIAA1958Q8N8K9 716 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 NGDNQ8NEJ9 315 aaKnown RBP5.99□□□□□ -1.45
COL3A1-205ENST00000470167 ANKRD20A12PQ8NF67 263 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 STAG1Q8WVM7 1258 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 KCNN1Q92952 543 aa5.99□□□□□ -1.45
COL3A1-205ENST00000470167 ZBTB10Q96DT7 871 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms