RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 GRIA4P48058 902 aa7.06□□□□□ -1.28
BRCA2-202ENST00000470094 ARL4DP49703 201 aa7.06□□□□□ -1.28
BRCA2-202ENST00000470094 IKBKEQ14164 716 aa7.06□□□□□ -1.28
BRCA2-202ENST00000470094 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.06□□□□□ -1.28
BRCA2-202ENST00000470094 ALG1LQ6GMV1 187 aa7.06□□□□□ -1.28
BRCA2-202ENST00000470094 PRPF40BQ6NWY9 871 aaKnown RBP7.06□□□□□ -1.28
BRCA2-202ENST00000470094 PI16Q6UXB8 463 aa7.06□□□□□ -1.28
BRCA2-202ENST00000470094 VN1R5Q7Z5H4 357 aa7.06□□□□□ -1.28
BRCA2-202ENST00000470094 GALNT11Q8NCW6 608 aa7.06□□□□□ -1.28
BRCA2-202ENST00000470094 OSGEPQ9NPF4 335 aa7.06□□□□□ -1.28
BRCA2-202ENST00000470094 MSTNO14793 375 aa7.05□□□□□ -1.28
BRCA2-202ENST00000470094 LDHBP07195 334 aaKnown RBP7.05□□□□□ -1.28
BRCA2-202ENST00000470094 CD68P34810 354 aaPredicted RBP7.05□□□□□ -1.28
BRCA2-202ENST00000470094 GRM2Q14416 872 aa7.05□□□□□ -1.28
BRCA2-202ENST00000470094 COL19A1Q14993 1142 aa7.05□□□□□ -1.28
BRCA2-202ENST00000470094 SPRED3Q2MJR0 410 aa7.05□□□□□ -1.28
BRCA2-202ENST00000470094 DNAJC14Q6Y2X3 702 aaPredicted RBP7.05□□□□□ -1.28
BRCA2-202ENST00000470094 MRPL18Q9H0U6 180 aaKnown RBP7.05□□□□□ -1.28
BRCA2-202ENST00000470094 CLEC4MQ9H2X3 399 aaPredicted RBP7.05□□□□□ -1.28
BRCA2-202ENST00000470094 PPP4R2Q9NY27 417 aa7.05□□□□□ -1.28
BRCA2-202ENST00000470094 GATA4P43694 442 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 FGD1P98174 961 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 C19orf57Q0VDD7 668 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 MBTPS1Q14703 1052 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 EAPPQ56P03 285 aaPredicted RBP7.04□□□□□ -1.28
BRCA2-202ENST00000470094 KLHDC7BQ96G42 594 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 SETDB2Q96T68 719 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 SPOCK3Q9BQ16 436 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 BCO2Q9BYV7 579 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 ABCB6Q9NP58 842 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 WWC3Q9ULE0 1092 aa7.04□□□□□ -1.28
BRCA2-202ENST00000470094 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
BRCA2-202ENST00000470094 SOX1O00570 391 aaPredicted RBP7.03□□□□□ -1.28
BRCA2-202ENST00000470094 ESRRAP11474 423 aaPredicted RBP7.03□□□□□ -1.28
BRCA2-202ENST00000470094 ERCC3P19447 782 aa7.03□□□□□ -1.28
BRCA2-202ENST00000470094 ITPKAP23677 461 aa7.03□□□□□ -1.28
BRCA2-202ENST00000470094 PCDH1Q08174 1060 aa7.03□□□□□ -1.28
BRCA2-202ENST00000470094 ADGRE1Q14246 886 aa7.03□□□□□ -1.28
BRCA2-202ENST00000470094 FOXD4L6Q3SYB3 417 aaPredicted RBP7.03□□□□□ -1.28
BRCA2-202ENST00000470094 TMCO4Q5TGY1 634 aa7.03□□□□□ -1.28
BRCA2-202ENST00000470094 FOXD4L3Q6VB84 417 aaPredicted RBP7.03□□□□□ -1.28
BRCA2-202ENST00000470094 NPAS4Q8IUM7 802 aa7.03□□□□□ -1.28
BRCA2-202ENST00000470094 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
BRCA2-202ENST00000470094 PROCP04070 461 aa7.02□□□□□ -1.29
BRCA2-202ENST00000470094 FCGRTP55899 365 aa7.02□□□□□ -1.29
BRCA2-202ENST00000470094 PTPN12Q05209 780 aaKnown RBP7.02□□□□□ -1.29
BRCA2-202ENST00000470094 NXPE4Q6UWF7 544 aa7.02□□□□□ -1.29
BRCA2-202ENST00000470094 DTHD1Q6ZMT9 781 aa7.02□□□□□ -1.29
BRCA2-202ENST00000470094 TXNRD3Q86VQ6 643 aa7.02□□□□□ -1.29
BRCA2-202ENST00000470094 GLIS3Q8NEA6 775 aa7.02□□□□□ -1.29
BRCA2-202ENST00000470094 ZNF576Q9H609 170 aa7.02□□□□□ -1.29
BRCA2-202ENST00000470094 SOX17Q9H6I2 414 aaPredicted RBP7.02□□□□□ -1.29
BRCA2-202ENST00000470094 SPG7Q9UQ90 795 aa7.02□□□□□ -1.29
BRCA2-202ENST00000470094 TM4SF5O14894 197 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 GIPC1O14908 333 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 DDX3YO15523 660 aaKnown RBP7.01□□□□□ -1.29
BRCA2-202ENST00000470094 PRPF40AO75400 957 aaKnown RBP7.01□□□□□ -1.29
BRCA2-202ENST00000470094 NLRP12P59046 1061 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 GSTM4Q03013 218 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 DUOXA2Q1HG44 320 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 HGSNATQ68CP4 663 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 ACAD11Q709F0 780 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 DDX54Q8TDD1 881 aaKnown RBP7.01□□□□□ -1.29
BRCA2-202ENST00000470094 FOXD4L4Q8WXT5 416 aaPredicted RBP7.01□□□□□ -1.29
BRCA2-202ENST00000470094 SRCIN1Q9C0H9 1055 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 AKTIPQ9H8T0 292 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 ZFYVE1Q9HBF4 777 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 KCNK4Q9NYG8 393 aa7.01□□□□□ -1.29
BRCA2-202ENST00000470094 ADAM11O75078 769 aa7□□□□□ -1.29
BRCA2-202ENST00000470094 XRCC5P13010 732 aaKnown RBP7□□□□□ -1.29
BRCA2-202ENST00000470094 RPS26P11Q5JNZ5 115 aaPredicted RBP7□□□□□ -1.29
BRCA2-202ENST00000470094 ZC3HAV1Q7Z2W4 902 aaKnown RBP7□□□□□ -1.29
BRCA2-202ENST00000470094 TMEM130Q8N3G9 435 aa7□□□□□ -1.29
BRCA2-202ENST00000470094 WFDC12Q8WWY7 111 aa7□□□□□ -1.29
BRCA2-202ENST00000470094 USP26Q9BXU7 913 aa7□□□□□ -1.29
BRCA2-202ENST00000470094 F8W735 103 aaPredicted RBP6.99□□□□□ -1.29
BRCA2-202ENST00000470094 WISP1O95388 367 aa6.99□□□□□ -1.29
BRCA2-202ENST00000470094 B3GALT4O96024 378 aa6.99□□□□□ -1.29
BRCA2-202ENST00000470094 NOS3P29474 1203 aa6.99□□□□□ -1.29
BRCA2-202ENST00000470094 GSTT1P30711 240 aa6.99□□□□□ -1.29
BRCA2-202ENST00000470094 IREB2P48200 963 aaKnown RBP6.99□□□□□ -1.29
BRCA2-202ENST00000470094 ZNF423Q2M1K9 1284 aa6.99□□□□□ -1.29
BRCA2-202ENST00000470094 UBASH3BQ8TF42 649 aa6.99□□□□□ -1.29
BRCA2-202ENST00000470094 FRMD6Q96NE9 622 aa6.99□□□□□ -1.29
BRCA2-202ENST00000470094 ALX3O95076 343 aa6.98□□□□□ -1.29
BRCA2-202ENST00000470094 GNA15P30679 374 aa6.98□□□□□ -1.29
BRCA2-202ENST00000470094 AGGF1Q8N302 714 aaeCLIP6.98□□□□□ -1.29
BRCA2-202ENST00000470094 DUSP9Q99956 384 aaKnown RBP6.98□□□□□ -1.29
BRCA2-202ENST00000470094 OSBPL7Q9BZF2 842 aa6.98□□□□□ -1.29
BRCA2-202ENST00000470094 C12orf49Q9H741 205 aa6.98□□□□□ -1.29
BRCA2-202ENST00000470094 AKAP2Q9Y2D5 859 aa6.98□□□□□ -1.29
BRCA2-202ENST00000470094 CYP11A1P05108 521 aa6.97□□□□□ -1.29
BRCA2-202ENST00000470094 GLB1P16278 677 aa6.97□□□□□ -1.29
BRCA2-202ENST00000470094 TRIM26Q12899 539 aaPredicted RBP6.97□□□□□ -1.29
BRCA2-202ENST00000470094 KIAA1211Q6ZU35 1233 aa6.97□□□□□ -1.29
BRCA2-202ENST00000470094 RUSC1Q9BVN2 902 aa6.97□□□□□ -1.29
BRCA2-202ENST00000470094 GPN3Q9UHW5 284 aaPredicted RBP6.97□□□□□ -1.29
BRCA2-202ENST00000470094 EIF4BP23588 611 aaKnown RBP6.96□□□□□ -1.3
BRCA2-202ENST00000470094 PPP2R3AQ06190 1150 aa6.96□□□□□ -1.3
BRCA2-202ENST00000470094 DOC2BQ14184 412 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms