RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 LAMB2P55268 1798 aa14.85□□□□□ -0.03
COMMD2-202ENST00000469896 COL1A1P02452 1464 aaPredicted RBP14.85□□□□□ -0.03
COMMD2-202ENST00000469896 COL3A1P02461 1466 aaPredicted RBP14.85□□□□□ -0.03
COMMD2-202ENST00000469896 TESPA1A2RU30 521 aaPredicted RBP14.85□□□□□ -0.03
COMMD2-202ENST00000469896 GJA8P48165 433 aa14.85□□□□□ -0.03
COMMD2-202ENST00000469896 RPS8P62241 208 aaKnown RBP14.85□□□□□ -0.03
COMMD2-202ENST00000469896 SF3B3Q15393 1217 aaKnown RBP14.85□□□□□ -0.03
COMMD2-202ENST00000469896 TAF1CQ15572 869 aaPredicted RBP14.85□□□□□ -0.03
COMMD2-202ENST00000469896 Q7L0L9 218 aa14.85□□□□□ -0.03
COMMD2-202ENST00000469896 UBE2Q1Q7Z7E8 422 aa14.85□□□□□ -0.03
COMMD2-202ENST00000469896 CIZ1Q9ULV3 898 aaPredicted RBP14.85□□□□□ -0.03
COMMD2-202ENST00000469896 SASH1O94885 1247 aa14.84□□□□□ -0.03
COMMD2-202ENST00000469896 FARP2O94887 1054 aaPredicted RBP14.84□□□□□ -0.03
COMMD2-202ENST00000469896 GJB1P08034 283 aa14.84□□□□□ -0.03
COMMD2-202ENST00000469896 IREB2P48200 963 aaKnown RBP14.84□□□□□ -0.03
COMMD2-202ENST00000469896 EIF4A1P60842 406 aaKnown RBP14.84□□□□□ -0.03
COMMD2-202ENST00000469896 PTPN18Q99952 460 aa14.84□□□□□ -0.03
COMMD2-202ENST00000469896 SUPT20HL1Q3ZLR7 823 aa14.83□□□□□ -0.04
COMMD2-202ENST00000469896 DEFB129Q9H1M3 183 aa14.83□□□□□ -0.04
COMMD2-202ENST00000469896 FZD1Q9UP38 647 aa14.83□□□□□ -0.04
COMMD2-202ENST00000469896 TTC28Q96AY4 2481 aa14.83□□□□□ -0.04
COMMD2-202ENST00000469896 BMP8BP34820 402 aa14.82□□□□□ -0.04
COMMD2-202ENST00000469896 MTFR1Q15390 333 aa14.82□□□□□ -0.04
COMMD2-202ENST00000469896 LRIT3Q3SXY7 679 aa14.82□□□□□ -0.04
COMMD2-202ENST00000469896 THUMPD2Q9BTF0 503 aaKnown RBP14.82□□□□□ -0.04
COMMD2-202ENST00000469896 PPP2R3BQ9Y5P8 575 aa14.82□□□□□ -0.04
COMMD2-202ENST00000469896 TAF1P21675 1872 aa14.81□□□□□ -0.04
COMMD2-202ENST00000469896 PLCG2P16885 1265 aa14.81□□□□□ -0.04
COMMD2-202ENST00000469896 COL9A1P20849 921 aa14.81□□□□□ -0.04
COMMD2-202ENST00000469896 LACTBP83111 547 aaPredicted RBP14.81□□□□□ -0.04
COMMD2-202ENST00000469896 CC2D1BQ5T0F9 858 aaKnown RBP14.81□□□□□ -0.04
COMMD2-202ENST00000469896 ANKRD13AQ8IZ07 590 aa14.81□□□□□ -0.04
COMMD2-202ENST00000469896 FBXW7Q969H0 707 aa14.81□□□□□ -0.04
COMMD2-202ENST00000469896 RNF208Q9H0X6 261 aa14.81□□□□□ -0.04
COMMD2-202ENST00000469896 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
COMMD2-202ENST00000469896 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.04
COMMD2-202ENST00000469896 CFAP53Q96M91 514 aa14.8□□□□□ -0.04
COMMD2-202ENST00000469896 RPTORQ8N122 1335 aa14.8□□□□□ -0.04
COMMD2-202ENST00000469896 SPTBN5Q9NRC6 3674 aaKnown RBP14.79□□□□□ -0.04
COMMD2-202ENST00000469896 CCL5P13501 91 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 CAPN2P17655 700 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 HOXD10P28358 340 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 GJA5P36382 358 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 XDHP47989 1333 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 PSEN1P49768 467 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 UBXN2AP68543 259 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 DACT2Q5SW24 774 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 LCE2DQ5TA82 110 aaPredicted RBP14.79□□□□□ -0.04
COMMD2-202ENST00000469896 STRIP1Q5VSL9 837 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 LRP10Q7Z4F1 713 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 RAET1EQ8TD07 263 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 FAM89AQ96GI7 184 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 OCEL1Q9H607 264 aa14.79□□□□□ -0.04
COMMD2-202ENST00000469896 BIN2Q9UBW5 565 aaPredicted RBP14.79□□□□□ -0.04
COMMD2-202ENST00000469896 ZNF646O15015 1829 aaPredicted RBP14.78□□□□□ -0.04
COMMD2-202ENST00000469896 LAMB1P07942 1786 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 CCL15-CCL14A0A0B4J2E2 113 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 HSP90B1P14625 803 aaKnown RBP14.78□□□□□ -0.04
COMMD2-202ENST00000469896 EIF2S2P20042 333 aaKnown RBP14.78□□□□□ -0.04
COMMD2-202ENST00000469896 GRK4P32298 578 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 GTF2A2P52657 109 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 AIMP1Q12904 312 aaKnown RBP14.78□□□□□ -0.04
COMMD2-202ENST00000469896 CCL15Q16663 113 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 COPS6Q7L5N1 327 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 U2AF1L4Q8WU68 220 aaKnown RBP14.78□□□□□ -0.04
COMMD2-202ENST00000469896 OPTNQ96CV9 577 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 TRIM47Q96LD4 638 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 GDF15Q99988 308 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 ARHGAP39Q9C0H5 1083 aa14.78□□□□□ -0.04
COMMD2-202ENST00000469896 TLR2O60603 784 aa14.77□□□□□ -0.05
COMMD2-202ENST00000469896 U2AF1L5P0DN76 240 aaPredicted RBP14.77□□□□□ -0.05
COMMD2-202ENST00000469896 ATP2B4P23634 1241 aa14.77□□□□□ -0.05
COMMD2-202ENST00000469896 U2AF1Q01081 240 aaKnown RBP eCLIP14.77□□□□□ -0.05
COMMD2-202ENST00000469896 PDIA6Q15084 440 aa14.77□□□□□ -0.05
COMMD2-202ENST00000469896 HELBQ8NG08 1087 aaPredicted RBP14.77□□□□□ -0.05
COMMD2-202ENST00000469896 BRI3BPQ8WY22 251 aa14.77□□□□□ -0.05
COMMD2-202ENST00000469896 MS4A4AQ96JQ5 239 aa14.77□□□□□ -0.05
COMMD2-202ENST00000469896 PSME4Q14997 1843 aa14.77□□□□□ -0.05
COMMD2-202ENST00000469896 MYO1BO43795 1136 aa14.76□□□□□ -0.05
COMMD2-202ENST00000469896 TDHQ8IZJ6 230 aa14.76□□□□□ -0.05
COMMD2-202ENST00000469896 XAGE3Q8WTP9 111 aa14.76□□□□□ -0.05
COMMD2-202ENST00000469896 SYMPKQ92797 1274 aaKnown RBP14.76□□□□□ -0.05
COMMD2-202ENST00000469896 ZNF428Q96B54 188 aa14.76□□□□□ -0.05
COMMD2-202ENST00000469896 MXD3Q9BW11 206 aa14.76□□□□□ -0.05
COMMD2-202ENST00000469896 ELP3Q9H9T3 547 aa14.76□□□□□ -0.05
COMMD2-202ENST00000469896 SRRDQ9UH36 339 aa14.76□□□□□ -0.05
COMMD2-202ENST00000469896 RIPOR2Q9Y4F9 1068 aa14.76□□□□□ -0.05
COMMD2-202ENST00000469896 IRS4O14654 1257 aaPredicted RBP14.75□□□□□ -0.05
COMMD2-202ENST00000469896 NEFMP07197 916 aa14.75□□□□□ -0.05
COMMD2-202ENST00000469896 BCAMP50895 628 aa14.75□□□□□ -0.05
COMMD2-202ENST00000469896 DLGAP5Q15398 846 aa14.75□□□□□ -0.05
COMMD2-202ENST00000469896 PROSER3Q2NL68 480 aa14.75□□□□□ -0.05
COMMD2-202ENST00000469896 KIAA0825Q8IV33 1275 aa14.75□□□□□ -0.05
COMMD2-202ENST00000469896 SSC5DA1L4H1 1573 aa14.75□□□□□ -0.05
COMMD2-202ENST00000469896 SGPL1O95470 568 aa14.74□□□□□ -0.05
COMMD2-202ENST00000469896 ANXA1P04083 346 aa14.74□□□□□ -0.05
COMMD2-202ENST00000469896 HSPA5P11021 654 aaKnown RBP14.74□□□□□ -0.05
COMMD2-202ENST00000469896 PLA2G5P39877 138 aa14.74□□□□□ -0.05
COMMD2-202ENST00000469896 FAM43AQ8N2R8 423 aa14.74□□□□□ -0.05
COMMD2-202ENST00000469896 FAM122AQ96E09 287 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms