RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 EXOC5O00471 708 aa17.26■□□□□ 0.35
CBWD3-205ENST00000469687 PHKA1P46020 1223 aa17.26■□□□□ 0.35
CBWD3-205ENST00000469687 ANTXR2P58335 489 aa17.26■□□□□ 0.35
CBWD3-205ENST00000469687 LRRFIP1Q32MZ4 808 aaKnown RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 ILDR1Q86SU0 546 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 LUZP1Q86V48 1076 aa17.26■□□□□ 0.35
CBWD3-205ENST00000469687 MB21D2Q8IYB1 491 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 PIH1D3Q9NQM4 214 aaKnown RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 R3HCC1Q9Y3T6 440 aaKnown RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 USP28Q96RU2 1077 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 NBPF3Q9H094 633 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 DDX19AQ9NUU7 478 aaKnown RBP17.25■□□□□ 0.35
CBWD3-205ENST00000469687 CTNNA3Q9UI47 895 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 PLCH1Q4KWH8 1693 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 WNK3Q9BYP7 1800 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 A0A0G2JS52 829 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 SNAP23O00161 211 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 PRC1O43663 620 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 PDE8BO95263 885 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 ANO6Q4KMQ2 910 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 OTUD7BQ6GQQ9 843 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 RBM43Q6ZSC3 357 aaKnown RBP17.25■□□□□ 0.35
CBWD3-205ENST00000469687 FAM200AQ8TCP9 573 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 CFAP45Q9UL16 551 aa17.25■□□□□ 0.35
CBWD3-205ENST00000469687 ABCC12Q96J65 1359 aa17.24■□□□□ 0.35
CBWD3-205ENST00000469687 PDE8AO60658 829 aa17.24■□□□□ 0.35
CBWD3-205ENST00000469687 ADD2P35612 726 aa17.24■□□□□ 0.35
CBWD3-205ENST00000469687 EVCP57679 992 aa17.24■□□□□ 0.35
CBWD3-205ENST00000469687 SLC9C2Q5TAH2 1124 aa17.24■□□□□ 0.35
CBWD3-205ENST00000469687 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
CBWD3-205ENST00000469687 C17orf53Q8N3J3 647 aaPredicted RBP17.24■□□□□ 0.35
CBWD3-205ENST00000469687 IDH1O75874 414 aaKnown RBP17.23■□□□□ 0.35
CBWD3-205ENST00000469687 CCDC102BQ68D86 513 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 FBXL16Q8N461 479 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 HPS5Q9UPZ3 1129 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 ROBO1Q9Y6N7 1651 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.23■□□□□ 0.35
CBWD3-205ENST00000469687 KLF18A0A0U1RQI7 1052 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 ZNF34Q8IZ26 560 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 GOLPH3LQ9H4A5 285 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 GJB4Q9NTQ9 266 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 WWC3Q9ULE0 1092 aa17.23■□□□□ 0.35
CBWD3-205ENST00000469687 ZNF213O14771 459 aa17.22■□□□□ 0.35
CBWD3-205ENST00000469687 IL6STP40189 918 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-205ENST00000469687 SPC24Q8NBT2 197 aa17.22■□□□□ 0.35
CBWD3-205ENST00000469687 CBX8Q9HC52 389 aa17.22■□□□□ 0.35
CBWD3-205ENST00000469687 RCOR1Q9UKL0 485 aa17.22■□□□□ 0.35
CBWD3-205ENST00000469687 GOLGA8BA8MQT2 603 aa17.22■□□□□ 0.35
CBWD3-205ENST00000469687 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
CBWD3-205ENST00000469687 TBC1D10CQ8IV04 446 aa17.22■□□□□ 0.35
CBWD3-205ENST00000469687 NCOA7Q8NI08 942 aa17.22■□□□□ 0.35
CBWD3-205ENST00000469687 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.22■□□□□ 0.35
CBWD3-205ENST00000469687 ZNF532Q9HCE3 1301 aa17.22■□□□□ 0.35
CBWD3-205ENST00000469687 SUSD4Q5VX71 490 aa17.21■□□□□ 0.35
CBWD3-205ENST00000469687 CCAR1Q8IX12 1150 aaKnown RBP17.21■□□□□ 0.35
CBWD3-205ENST00000469687 ACSBG1Q96GR2 724 aa17.21■□□□□ 0.35
CBWD3-205ENST00000469687 KIF3AQ9Y496 699 aa17.21■□□□□ 0.35
CBWD3-205ENST00000469687 C4AP0C0L4 1744 aa17.21■□□□□ 0.35
CBWD3-205ENST00000469687 C4BP0C0L5 1744 aa17.21■□□□□ 0.35
CBWD3-205ENST00000469687 LRP5O75197 1615 aa17.21■□□□□ 0.35
CBWD3-205ENST00000469687 RALYLQ86SE5 291 aaKnown RBP17.21■□□□□ 0.34
CBWD3-205ENST00000469687 ZNF512BQ96KM6 892 aaPredicted RBP17.21■□□□□ 0.34
CBWD3-205ENST00000469687 DNAJC25Q9H1X3 360 aa17.21■□□□□ 0.34
CBWD3-205ENST00000469687 MYH14Q7Z406 1995 aaKnown RBP17.2■□□□□ 0.34
CBWD3-205ENST00000469687 TPM2P07951 284 aa17.2■□□□□ 0.34
CBWD3-205ENST00000469687 INTS5Q6P9B9 1019 aaKnown RBP17.2■□□□□ 0.34
CBWD3-205ENST00000469687 KCNF1Q9H3M0 494 aa17.2■□□□□ 0.34
CBWD3-205ENST00000469687 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
CBWD3-205ENST00000469687 ATRNO75882 1429 aa17.2■□□□□ 0.34
CBWD3-205ENST00000469687 PDE6AP16499 860 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 FGFR2P21802 821 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 ARID4AP29374 1257 aaPredicted RBP17.19■□□□□ 0.34
CBWD3-205ENST00000469687 EIF5P55010 431 aaKnown RBP17.19■□□□□ 0.34
CBWD3-205ENST00000469687 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
CBWD3-205ENST00000469687 CYB5R4Q7L1T6 521 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 ARAP2Q8WZ64 1704 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 A0A087WWV3 80 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 TCRBV5S4A2TA0A5A2 114 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 APPP05067 770 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 PUM3Q15397 648 aaKnown RBP17.19■□□□□ 0.34
CBWD3-205ENST00000469687 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 SENP2Q9HC62 589 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 INCENPQ9NQS7 918 aa17.19■□□□□ 0.34
CBWD3-205ENST00000469687 ADAMTS2O95450 1211 aa17.18■□□□□ 0.34
CBWD3-205ENST00000469687 POLR3DP05423 398 aaPredicted RBP17.18■□□□□ 0.34
CBWD3-205ENST00000469687 RXRAP19793 462 aa17.18■□□□□ 0.34
CBWD3-205ENST00000469687 TTF1Q15361 905 aaPredicted RBP17.18■□□□□ 0.34
CBWD3-205ENST00000469687 ZSCAN25Q6NSZ9 544 aa17.18■□□□□ 0.34
CBWD3-205ENST00000469687 PIBF1Q8WXW3 757 aa17.18■□□□□ 0.34
CBWD3-205ENST00000469687 ORC3Q9UBD5 711 aaPredicted RBP17.18■□□□□ 0.34
CBWD3-205ENST00000469687 PHLPP1O60346 1717 aa17.18■□□□□ 0.34
CBWD3-205ENST00000469687 ME1P48163 572 aa17.18■□□□□ 0.34
CBWD3-205ENST00000469687 UBE3CQ15386 1083 aa17.18■□□□□ 0.34
CBWD3-205ENST00000469687 LPIN2Q92539 896 aa17.18■□□□□ 0.34
CBWD3-205ENST00000469687 C8orf76Q96K31 380 aa17.18■□□□□ 0.34
CBWD3-205ENST00000469687 ATP6V1AP38606 617 aa17.17■□□□□ 0.34
CBWD3-205ENST00000469687 CRKLP46109 303 aaKnown RBP17.17■□□□□ 0.34
CBWD3-205ENST00000469687 ZNF165P49910 485 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms