RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 SOX10P56693 466 aa16.07■□□□□ 0.16
GAPVD1-214ENST00000469528 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
GAPVD1-214ENST00000469528 MAP3K11Q16584 847 aa16.07■□□□□ 0.16
GAPVD1-214ENST00000469528 SPRYD7Q5W111 196 aa16.07■□□□□ 0.16
GAPVD1-214ENST00000469528 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
GAPVD1-214ENST00000469528 C9orf78Q9NZ63 289 aaPredicted RBP16.07■□□□□ 0.16
GAPVD1-214ENST00000469528 CACNA1FO60840 1977 aa16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 FANCIQ9NVI1 1328 aa16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 ANP32CO43423 234 aa16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 ZBTB48P10074 688 aaPredicted RBP16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 IREB2P48200 963 aaKnown RBP16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 FOXO4P98177 505 aa16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 FBXO46Q6PJ61 603 aaPredicted RBP16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 HELBQ8NG08 1087 aaPredicted RBP16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 CNNM1Q9NRU3 951 aa16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
GAPVD1-214ENST00000469528 KLRK1P26718 216 aa16.05■□□□□ 0.16
GAPVD1-214ENST00000469528 RBM5P52756 815 aaKnown RBP eCLIP16.05■□□□□ 0.16
GAPVD1-214ENST00000469528 EXOSC9Q06265 439 aaKnown RBP16.05■□□□□ 0.16
GAPVD1-214ENST00000469528 TNFAIP1Q13829 316 aa16.05■□□□□ 0.16
GAPVD1-214ENST00000469528 CFAP100Q494V2 611 aa16.05■□□□□ 0.16
GAPVD1-214ENST00000469528 BEND3Q5T5X7 828 aa16.05■□□□□ 0.16
GAPVD1-214ENST00000469528 LMBR1LQ6UX01 489 aa16.05■□□□□ 0.16
GAPVD1-214ENST00000469528 GRM8O00222 908 aa16.04■□□□□ 0.16
GAPVD1-214ENST00000469528 PLIN1O60240 522 aa16.04■□□□□ 0.16
GAPVD1-214ENST00000469528 ALDH1L1O75891 902 aa16.04■□□□□ 0.16
GAPVD1-214ENST00000469528 CCDC184Q52MB2 194 aa16.04■□□□□ 0.16
GAPVD1-214ENST00000469528 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
GAPVD1-214ENST00000469528 SPDYE2BA6NHP3 402 aa16.03■□□□□ 0.16
GAPVD1-214ENST00000469528 F8W031 263 aaPredicted RBP16.03■□□□□ 0.16
GAPVD1-214ENST00000469528 SPDYE6P0CI01 402 aa16.03■□□□□ 0.16
GAPVD1-214ENST00000469528 UBE4AQ14139 1066 aa16.03■□□□□ 0.16
GAPVD1-214ENST00000469528 IFNL1Q8IU54 200 aa16.03■□□□□ 0.16
GAPVD1-214ENST00000469528 PRMT6Q96LA8 375 aaPredicted RBP16.03■□□□□ 0.16
GAPVD1-214ENST00000469528 F6X3S4 739 aa16.02■□□□□ 0.16
GAPVD1-214ENST00000469528 HIBADHP31937 336 aaKnown RBP16.02■□□□□ 0.16
GAPVD1-214ENST00000469528 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.16
GAPVD1-214ENST00000469528 ANKRD13AQ8IZ07 590 aa16.02■□□□□ 0.16
GAPVD1-214ENST00000469528 CERS5Q8N5B7 392 aa16.02■□□□□ 0.16
GAPVD1-214ENST00000469528 VEZTQ9HBM0 779 aa16.02■□□□□ 0.16
GAPVD1-214ENST00000469528 SPEF2Q9C093 1822 aa16.01■□□□□ 0.15
GAPVD1-214ENST00000469528 ARHGEF6Q15052 776 aa16.01■□□□□ 0.15
GAPVD1-214ENST00000469528 PRPF38BQ5VTL8 546 aaKnown RBP16.01■□□□□ 0.15
GAPVD1-214ENST00000469528 SRCIN1Q9C0H9 1055 aa16.01■□□□□ 0.15
GAPVD1-214ENST00000469528 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.01■□□□□ 0.15
GAPVD1-214ENST00000469528 SERPINA10Q9UK55 444 aa16.01■□□□□ 0.15
GAPVD1-214ENST00000469528 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 IRS2Q9Y4H2 1338 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 CLRN2A0PK11 232 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 SNAP23O00161 211 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 TNNI2P48788 182 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 RASA3Q14644 834 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 SLC4A10Q6U841 1118 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 VPS37DQ86XT2 251 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 TDRD7Q8NHU6 1098 aaKnown RBP16■□□□□ 0.15
GAPVD1-214ENST00000469528 ERO1AQ96HE7 468 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 WNK4Q96J92 1243 aa16■□□□□ 0.15
GAPVD1-214ENST00000469528 MROH5Q6ZUA9 1318 aa15.99■□□□□ 0.15
GAPVD1-214ENST00000469528 TNRC18O15417 2968 aaPredicted RBP15.99■□□□□ 0.15
GAPVD1-214ENST00000469528 USP2O75604 605 aaPredicted RBP15.99■□□□□ 0.15
GAPVD1-214ENST00000469528 CAVIN4Q5BKX8 364 aa15.99■□□□□ 0.15
GAPVD1-214ENST00000469528 MFSD14BQ5SR56 506 aa15.99■□□□□ 0.15
GAPVD1-214ENST00000469528 NBPF12Q5TAG4 269 aaPredicted RBP15.99■□□□□ 0.15
GAPVD1-214ENST00000469528 ZNF594Q96JF6 807 aaPredicted RBP15.99■□□□□ 0.15
GAPVD1-214ENST00000469528 TTF2Q9UNY4 1162 aaKnown RBP15.99■□□□□ 0.15
GAPVD1-214ENST00000469528 FRAT2O75474 233 aaPredicted RBP15.98■□□□□ 0.15
GAPVD1-214ENST00000469528 WDHD1O75717 1129 aaPredicted RBP15.98■□□□□ 0.15
GAPVD1-214ENST00000469528 TBC1D22AQ8WUA7 517 aa15.98■□□□□ 0.15
GAPVD1-214ENST00000469528 TRIM17Q9Y577 477 aa15.98■□□□□ 0.15
GAPVD1-214ENST00000469528 PDE4DIPQ5VU43 2346 aa15.97■□□□□ 0.15
GAPVD1-214ENST00000469528 EPHA10Q5JZY3 1008 aa15.97■□□□□ 0.15
GAPVD1-214ENST00000469528 HOOK2Q96ED9 719 aa15.97■□□□□ 0.15
GAPVD1-214ENST00000469528 CLMNQ96JQ2 1002 aa15.97■□□□□ 0.15
GAPVD1-214ENST00000469528 FAM84BQ96KN1 310 aaPredicted RBP15.97■□□□□ 0.15
GAPVD1-214ENST00000469528 ZNF70Q9UC06 446 aaPredicted RBP15.97■□□□□ 0.15
GAPVD1-214ENST00000469528 FZD1Q9UP38 647 aa15.97■□□□□ 0.15
GAPVD1-214ENST00000469528 TESPA1A2RU30 521 aaPredicted RBP15.96■□□□□ 0.15
GAPVD1-214ENST00000469528 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
GAPVD1-214ENST00000469528 HDLBPQ00341 1268 aaKnown RBP15.96■□□□□ 0.15
GAPVD1-214ENST00000469528 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
GAPVD1-214ENST00000469528 DZIP1LQ8IYY4 767 aaKnown RBP15.96■□□□□ 0.15
GAPVD1-214ENST00000469528 GCC1Q96CN9 775 aa15.96■□□□□ 0.15
GAPVD1-214ENST00000469528 MRIQ9BWK5 157 aa15.96■□□□□ 0.15
GAPVD1-214ENST00000469528 R3HDMLQ9H3Y0 253 aa15.96■□□□□ 0.15
GAPVD1-214ENST00000469528 JAG2Q9Y219 1238 aa15.96■□□□□ 0.15
GAPVD1-214ENST00000469528 GYG1P46976 350 aa15.95■□□□□ 0.14
GAPVD1-214ENST00000469528 GTF2A2P52657 109 aa15.95■□□□□ 0.14
GAPVD1-214ENST00000469528 MAP3K9P80192 1104 aa15.95■□□□□ 0.14
GAPVD1-214ENST00000469528 SP3Q02447 781 aa15.95■□□□□ 0.14
GAPVD1-214ENST00000469528 TDRD3Q9H7E2 651 aaKnown RBP15.95■□□□□ 0.14
GAPVD1-214ENST00000469528 RIPOR2Q9Y4F9 1068 aa15.95■□□□□ 0.14
GAPVD1-214ENST00000469528 PCDHAC2Q9Y5I4 1007 aa15.95■□□□□ 0.14
GAPVD1-214ENST00000469528 CSADQ9Y600 493 aa15.95■□□□□ 0.14
GAPVD1-214ENST00000469528 IGF2BP3O00425 579 aaKnown RBP eCLIP15.94■□□□□ 0.14
GAPVD1-214ENST00000469528 CRKP46108 304 aa15.94■□□□□ 0.14
GAPVD1-214ENST00000469528 OTOP1Q7RTM1 612 aa15.94■□□□□ 0.14
GAPVD1-214ENST00000469528 EFCC1Q9HA90 598 aa15.94■□□□□ 0.14
GAPVD1-214ENST00000469528 TMOD2Q9NZR1 351 aa15.94■□□□□ 0.14
GAPVD1-214ENST00000469528 ZNF646O15015 1829 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms