RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 HIP1O00291 1037 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 SNX21Q969T3 373 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 TAF6LQ9Y6J9 622 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 M0R2C6 588 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 BAG6P46379 1132 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 SPATA5Q8NB90 893 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 OSBP2Q969R2 916 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 CRAMP1Q96RY5 1269 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 SLX4Q8IY92 1834 aa9.97□□□□□ -0.81
BRCA1-208ENST00000468300 GPSM2P81274 684 aa9.96□□□□□ -0.81
BRCA1-208ENST00000468300 GORABQ5T7V8 394 aa9.96□□□□□ -0.81
BRCA1-208ENST00000468300 STK32BQ9NY57 414 aa9.96□□□□□ -0.81
BRCA1-208ENST00000468300 MAST3O60307 1309 aa9.96□□□□□ -0.81
BRCA1-208ENST00000468300 SNED1Q8TER0 1413 aa9.96□□□□□ -0.82
BRCA1-208ENST00000468300 RNF113AO15541 343 aaKnown RBP9.96□□□□□ -0.82
BRCA1-208ENST00000468300 UQCRFS1P1P0C7P4 283 aa9.96□□□□□ -0.82
BRCA1-208ENST00000468300 SNX14Q9Y5W7 946 aa9.96□□□□□ -0.82
BRCA1-208ENST00000468300 CLSTN1O94985 981 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 MCMDC2Q4G0Z9 681 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 VPS53Q5VIR6 699 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 ZNF384Q8TF68 577 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 RUFY2Q8WXA3 655 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 CHD4Q14839 1912 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 RBM17Q96I25 401 aaKnown RBP9.95□□□□□ -0.82
BRCA1-208ENST00000468300 ANKRD2Q9GZV1 360 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 PUS7LQ9H0K6 701 aaKnown RBP9.95□□□□□ -0.82
BRCA1-208ENST00000468300 HELLSQ9NRZ9 838 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 MAST2Q6P0Q8 1798 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 NPHP1O15259 732 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 ADD2P35612 726 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 ANAPC15P60006 121 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 C15orf52Q6ZUT6 534 aaKnown RBP9.95□□□□□ -0.82
BRCA1-208ENST00000468300 CERS3Q8IU89 383 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 RPGRQ92834 1020 aaKnown RBP9.95□□□□□ -0.82
BRCA1-208ENST00000468300 WWC3Q9ULE0 1092 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 PARP3Q9Y6F1 533 aa9.95□□□□□ -0.82
BRCA1-208ENST00000468300 A0A0G2JLW4 131 aa9.94□□□□□ -0.82
BRCA1-208ENST00000468300 OLFM4Q6UX06 510 aa9.94□□□□□ -0.82
BRCA1-208ENST00000468300 CCDC125Q86Z20 511 aa9.94□□□□□ -0.82
BRCA1-208ENST00000468300 C10orf71Q711Q0 1435 aa9.94□□□□□ -0.82
BRCA1-208ENST00000468300 ADCK5Q3MIX3 580 aa9.94□□□□□ -0.82
BRCA1-208ENST00000468300 GPR101Q96P66 508 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-208ENST00000468300 POLLQ9UGP5 575 aa9.94□□□□□ -0.82
BRCA1-208ENST00000468300 RBM8AQ9Y5S9 174 aaKnown RBP9.94□□□□□ -0.82
BRCA1-208ENST00000468300 BBOX1O75936 387 aa9.94□□□□□ -0.82
BRCA1-208ENST00000468300 RABEP1Q15276 862 aa9.94□□□□□ -0.82
BRCA1-208ENST00000468300 IPO4Q8TEX9 1081 aaKnown RBP9.94□□□□□ -0.82
BRCA1-208ENST00000468300 IQSEC3Q9UPP2 1182 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-208ENST00000468300 DDIT3P35638 169 aa9.93□□□□□ -0.82
BRCA1-208ENST00000468300 ADGRA1Q86SQ6 560 aa9.93□□□□□ -0.82
BRCA1-208ENST00000468300 XDHP47989 1333 aa9.93□□□□□ -0.82
BRCA1-208ENST00000468300 RPAP1Q9BWH6 1393 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-208ENST00000468300 SLC27A2O14975 620 aa9.93□□□□□ -0.82
BRCA1-208ENST00000468300 NPR1P16066 1061 aa9.93□□□□□ -0.82
BRCA1-208ENST00000468300 BRCA1P38398 1863 aaKnown RBP9.93□□□□□ -0.82
BRCA1-208ENST00000468300 SF3B2Q13435 895 aaKnown RBP9.93□□□□□ -0.82
BRCA1-208ENST00000468300 TTF1Q15361 905 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-208ENST00000468300 PDS5AQ29RF7 1337 aaKnown RBP9.93□□□□□ -0.82
BRCA1-208ENST00000468300 CREB3L3Q68CJ9 461 aa9.93□□□□□ -0.82
BRCA1-208ENST00000468300 TEX2Q8IWB9 1127 aa9.93□□□□□ -0.82
BRCA1-208ENST00000468300 LEMD3Q9Y2U8 911 aa9.93□□□□□ -0.82
BRCA1-208ENST00000468300 HSPD1P10809 573 aaKnown RBP9.92□□□□□ -0.82
BRCA1-208ENST00000468300 PDE6AP16499 860 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 TSGA10IPQ3SY00 556 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 PRPF40BQ6NWY9 871 aaKnown RBP9.92□□□□□ -0.82
BRCA1-208ENST00000468300 SP8Q8IXZ3 490 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 TTC14Q96N46 770 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 ATP6V0A2Q9Y487 856 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 ZNF532Q9HCE3 1301 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 PPEF1O14829 653 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-208ENST00000468300 PDE6BP35913 854 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 UBE3CQ15386 1083 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 SLC9C2Q5TAH2 1124 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 APPBP2Q92624 585 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 CCDC88AQ3V6T2 1871 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 ZFYP08048 801 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-208ENST00000468300 TBC1D16Q8TBP0 767 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 C7orf43Q8WVR3 580 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 MASTLQ96GX5 879 aa9.92□□□□□ -0.82
BRCA1-208ENST00000468300 KCNA3P22001 575 aa9.91□□□□□ -0.82
BRCA1-208ENST00000468300 HIBADHP31937 336 aaKnown RBP9.91□□□□□ -0.82
BRCA1-208ENST00000468300 TDRD7Q8NHU6 1098 aaKnown RBP9.91□□□□□ -0.82
BRCA1-208ENST00000468300 DSCC1Q9BVC3 393 aa9.91□□□□□ -0.82
BRCA1-208ENST00000468300 ANKIB1Q9P2G1 1089 aa9.91□□□□□ -0.82
BRCA1-208ENST00000468300 CYP21A2P08686 494 aa9.91□□□□□ -0.82
BRCA1-208ENST00000468300 CPA1P15085 419 aa9.91□□□□□ -0.82
BRCA1-208ENST00000468300 CHRNA5P30532 468 aa9.91□□□□□ -0.82
BRCA1-208ENST00000468300 CAVIN4Q5BKX8 364 aa9.91□□□□□ -0.82
BRCA1-208ENST00000468300 KIAA1211Q6ZU35 1233 aa9.91□□□□□ -0.82
BRCA1-208ENST00000468300 UPF1Q92900 1129 aaKnown RBP eCLIP9.91□□□□□ -0.82
BRCA1-208ENST00000468300 PLCD4Q9BRC7 762 aa9.91□□□□□ -0.82
BRCA1-208ENST00000468300 SEMA3EO15041 775 aa9.9□□□□□ -0.82
BRCA1-208ENST00000468300 STOX1Q6ZVD7 989 aa9.9□□□□□ -0.82
BRCA1-208ENST00000468300 CDK5RAP2Q96SN8 1893 aa9.9□□□□□ -0.82
BRCA1-208ENST00000468300 IDH1O75874 414 aaKnown RBP9.9□□□□□ -0.82
BRCA1-208ENST00000468300 IL1R1P14778 569 aa9.9□□□□□ -0.82
BRCA1-208ENST00000468300 GRIK5Q16478 980 aa9.9□□□□□ -0.82
BRCA1-208ENST00000468300 STYK1Q6J9G0 422 aa9.9□□□□□ -0.82
BRCA1-208ENST00000468300 UPF3BQ9BZI7 483 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms