RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 A0A1B0GUL6 1792 aa17.44■□□□□ 0.38
RPP40-204ENST00000468105 CLRN2A0PK11 232 aa17.44■□□□□ 0.38
RPP40-204ENST00000468105 MANSC4A6NHS7 340 aaPredicted RBP17.44■□□□□ 0.38
RPP40-204ENST00000468105 USP2O75604 605 aaPredicted RBP17.44■□□□□ 0.38
RPP40-204ENST00000468105 HSP90B1P14625 803 aaKnown RBP17.44■□□□□ 0.38
RPP40-204ENST00000468105 UBE3BQ7Z3V4 1068 aa17.44■□□□□ 0.38
RPP40-204ENST00000468105 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
RPP40-204ENST00000468105 LEMD3Q9Y2U8 911 aa17.44■□□□□ 0.38
RPP40-204ENST00000468105 ZSWIM8A7E2V4 1837 aa17.44■□□□□ 0.38
RPP40-204ENST00000468105 CEP290O15078 2479 aa17.43■□□□□ 0.38
RPP40-204ENST00000468105 ECM29Q5VYK3 1845 aa17.43■□□□□ 0.38
RPP40-204ENST00000468105 TAF5LO75529 589 aa17.43■□□□□ 0.38
RPP40-204ENST00000468105 ITGA6P23229 1130 aa17.43■□□□□ 0.38
RPP40-204ENST00000468105 CHRNDQ07001 517 aa17.43■□□□□ 0.38
RPP40-204ENST00000468105 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
RPP40-204ENST00000468105 HELBQ8NG08 1087 aaPredicted RBP17.43■□□□□ 0.38
RPP40-204ENST00000468105 ARMC5Q96C12 935 aa17.43■□□□□ 0.38
RPP40-204ENST00000468105 RANBP2P49792 3224 aaKnown RBP17.43■□□□□ 0.38
RPP40-204ENST00000468105 F8W031 263 aaPredicted RBP17.42■□□□□ 0.38
RPP40-204ENST00000468105 CSF1RP07333 972 aa17.42■□□□□ 0.38
RPP40-204ENST00000468105 ZBTB48P10074 688 aaPredicted RBP17.42■□□□□ 0.38
RPP40-204ENST00000468105 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
RPP40-204ENST00000468105 MTMR14Q8NCE2 650 aa17.42■□□□□ 0.38
RPP40-204ENST00000468105 TSR2Q969E8 191 aaKnown RBP17.42■□□□□ 0.38
RPP40-204ENST00000468105 ALDH1A1P00352 501 aa17.41■□□□□ 0.38
RPP40-204ENST00000468105 GNAI1P63096 354 aa17.41■□□□□ 0.38
RPP40-204ENST00000468105 CFAP100Q494V2 611 aa17.41■□□□□ 0.38
RPP40-204ENST00000468105 MS4A4AQ96JQ5 239 aa17.41■□□□□ 0.38
RPP40-204ENST00000468105 TRIOBPQ9H2D6 2365 aa17.4■□□□□ 0.38
RPP40-204ENST00000468105 COL1A1P02452 1464 aaPredicted RBP17.4■□□□□ 0.38
RPP40-204ENST00000468105 TESPA1A2RU30 521 aaPredicted RBP17.4■□□□□ 0.38
RPP40-204ENST00000468105 SPDYE2BA6NHP3 402 aa17.4■□□□□ 0.38
RPP40-204ENST00000468105 SPDYE6P0CI01 402 aa17.4■□□□□ 0.38
RPP40-204ENST00000468105 DLGAP5Q15398 846 aa17.4■□□□□ 0.38
RPP40-204ENST00000468105 CCDC30Q5VVM6 783 aa17.4■□□□□ 0.38
RPP40-204ENST00000468105 GCC1Q96CN9 775 aa17.4■□□□□ 0.38
RPP40-204ENST00000468105 PLA2G12BQ9BX93 195 aa17.4■□□□□ 0.38
RPP40-204ENST00000468105 COLQQ9Y215 455 aaPredicted RBP17.4■□□□□ 0.38
RPP40-204ENST00000468105 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
RPP40-204ENST00000468105 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
RPP40-204ENST00000468105 INHBEP58166 350 aa17.39■□□□□ 0.37
RPP40-204ENST00000468105 GCKRQ14397 625 aa17.39■□□□□ 0.37
RPP40-204ENST00000468105 INTS3Q68E01 1043 aaKnown RBP17.39■□□□□ 0.37
RPP40-204ENST00000468105 RASA3Q14644 834 aa17.38■□□□□ 0.37
RPP40-204ENST00000468105 BRI3BPQ8WY22 251 aa17.38■□□□□ 0.37
RPP40-204ENST00000468105 ZNF333Q96JL9 665 aa17.38■□□□□ 0.37
RPP40-204ENST00000468105 TEPSINQ96N21 525 aa17.38■□□□□ 0.37
RPP40-204ENST00000468105 ELP3Q9H9T3 547 aa17.38■□□□□ 0.37
RPP40-204ENST00000468105 EFCC1Q9HA90 598 aa17.38■□□□□ 0.37
RPP40-204ENST00000468105 IL1R1P14778 569 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 FOXO4P98177 505 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 SP3Q02447 781 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 GRIK5Q16478 980 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 EPHA10Q5JZY3 1008 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
RPP40-204ENST00000468105 C15orf52Q6ZUT6 534 aaKnown RBP17.37■□□□□ 0.37
RPP40-204ENST00000468105 ERO1AQ96HE7 468 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 ARHGAP39Q9C0H5 1083 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 ANKRD2Q9GZV1 360 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 VEZTQ9HBM0 779 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 PTCH2Q9Y6C5 1203 aa17.37■□□□□ 0.37
RPP40-204ENST00000468105 MMP14P50281 582 aa17.36■□□□□ 0.37
RPP40-204ENST00000468105 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
RPP40-204ENST00000468105 MYCP01106 439 aaPredicted RBP17.35■□□□□ 0.37
RPP40-204ENST00000468105 FAM43AQ8N2R8 423 aa17.35■□□□□ 0.37
RPP40-204ENST00000468105 OPTNQ96CV9 577 aa17.35■□□□□ 0.37
RPP40-204ENST00000468105 ZNF594Q96JF6 807 aaPredicted RBP17.35■□□□□ 0.37
RPP40-204ENST00000468105 MPHOSPH8Q99549 860 aa17.35■□□□□ 0.37
RPP40-204ENST00000468105 PPP2R3BQ9Y5P8 575 aa17.35■□□□□ 0.37
RPP40-204ENST00000468105 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
RPP40-204ENST00000468105 OTUD5Q96G74 571 aa17.34■□□□□ 0.37
RPP40-204ENST00000468105 H0YGN5 161 aa17.33■□□□□ 0.36
RPP40-204ENST00000468105 CTGFP29279 349 aa17.33■□□□□ 0.36
RPP40-204ENST00000468105 KCNJ4P48050 445 aa17.33■□□□□ 0.36
RPP40-204ENST00000468105 NEXNQ0ZGT2 675 aa17.33■□□□□ 0.36
RPP40-204ENST00000468105 SUPT20HL1Q3ZLR7 823 aa17.33■□□□□ 0.36
RPP40-204ENST00000468105 ANKRD13AQ8IZ07 590 aa17.33■□□□□ 0.36
RPP40-204ENST00000468105 TDRD3Q9H7E2 651 aaKnown RBP17.33■□□□□ 0.36
RPP40-204ENST00000468105 ZNF70Q9UC06 446 aaPredicted RBP17.33■□□□□ 0.36
RPP40-204ENST00000468105 UNCXA6NJT0 531 aa17.32■□□□□ 0.36
RPP40-204ENST00000468105 SPDYE2Q495Y8 402 aa17.32■□□□□ 0.36
RPP40-204ENST00000468105 SH3TC2Q8TF17 1288 aa17.32■□□□□ 0.36
RPP40-204ENST00000468105 TMEM39BQ9GZU3 492 aa17.32■□□□□ 0.36
RPP40-204ENST00000468105 IREB2P48200 963 aaKnown RBP17.31■□□□□ 0.36
RPP40-204ENST00000468105 FKBP1AP62942 108 aaKnown RBP17.31■□□□□ 0.36
RPP40-204ENST00000468105 FLIIQ13045 1269 aa17.31■□□□□ 0.36
RPP40-204ENST00000468105 VGLL4Q14135 290 aa17.31■□□□□ 0.36
RPP40-204ENST00000468105 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
RPP40-204ENST00000468105 ANKRD18BA2A2Z9 1011 aa17.3■□□□□ 0.36
RPP40-204ENST00000468105 F6X3S4 739 aa17.3■□□□□ 0.36
RPP40-204ENST00000468105 ECM2O94769 699 aaPredicted RBP17.3■□□□□ 0.36
RPP40-204ENST00000468105 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.3■□□□□ 0.36
RPP40-204ENST00000468105 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
RPP40-204ENST00000468105 SHISA4Q96DD7 197 aa17.3■□□□□ 0.36
RPP40-204ENST00000468105 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
RPP40-204ENST00000468105 FAM205AQ6ZU69 1335 aa17.29■□□□□ 0.36
RPP40-204ENST00000468105 CCL15-CCL14A0A0B4J2E2 113 aa17.29■□□□□ 0.36
RPP40-204ENST00000468105 TCP10L2B9ZVM9 353 aa17.29■□□□□ 0.36
RPP40-204ENST00000468105 PLIN1O60240 522 aa17.29■□□□□ 0.36
RPP40-204ENST00000468105 GYG1P46976 350 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms