RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
PRPF3-203ENST00000467514 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
PRPF3-203ENST00000467514 STK31Q9BXU1 1019 aa13.8□□□□□ -0.2
PRPF3-203ENST00000467514 ZBTB40Q9NUA8 1239 aa13.8□□□□□ -0.2
PRPF3-203ENST00000467514 HYPKQ9NX55 129 aa13.8□□□□□ -0.2
PRPF3-203ENST00000467514 DDX19BQ9UMR2 479 aa13.8□□□□□ -0.2
PRPF3-203ENST00000467514 MYO3BQ8WXR4 1341 aa13.8□□□□□ -0.2
PRPF3-203ENST00000467514 WNT10BO00744 389 aa13.79□□□□□ -0.2
PRPF3-203ENST00000467514 FXR1P51114 621 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRPF3-203ENST00000467514 FLIIQ13045 1269 aa13.79□□□□□ -0.2
PRPF3-203ENST00000467514 ZBTB38Q8NAP3 1195 aaPredicted RBP13.79□□□□□ -0.2
PRPF3-203ENST00000467514 CD99L2Q8TCZ2 262 aa13.79□□□□□ -0.2
PRPF3-203ENST00000467514 GMLQ99445 158 aa13.79□□□□□ -0.2
PRPF3-203ENST00000467514 CFHR5Q9BXR6 569 aa13.79□□□□□ -0.2
PRPF3-203ENST00000467514 CENPFP49454 3210 aa13.79□□□□□ -0.2
PRPF3-203ENST00000467514 CACNA1FO60840 1977 aa13.79□□□□□ -0.2
PRPF3-203ENST00000467514 KIAA0100Q14667 2235 aaKnown RBP13.79□□□□□ -0.2
PRPF3-203ENST00000467514 ZBTB7BO15156 539 aaPredicted RBP13.78□□□□□ -0.2
PRPF3-203ENST00000467514 EN2P19622 333 aaPredicted RBP13.78□□□□□ -0.2
PRPF3-203ENST00000467514 INHBEP58166 350 aa13.78□□□□□ -0.2
PRPF3-203ENST00000467514 IFNL1Q8IU54 200 aa13.78□□□□□ -0.2
PRPF3-203ENST00000467514 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
PRPF3-203ENST00000467514 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
PRPF3-203ENST00000467514 MYD88Q99836 296 aa13.78□□□□□ -0.2
PRPF3-203ENST00000467514 MXD3Q9BW11 206 aa13.78□□□□□ -0.2
PRPF3-203ENST00000467514 EFCC1Q9HA90 598 aa13.78□□□□□ -0.2
PRPF3-203ENST00000467514 PCDHB15Q9Y5E8 787 aa13.78□□□□□ -0.2
PRPF3-203ENST00000467514 HTTP42858 3142 aa13.77□□□□□ -0.2
PRPF3-203ENST00000467514 PPP1R12BO60237 982 aaPredicted RBP13.77□□□□□ -0.21
PRPF3-203ENST00000467514 PDE8AO60658 829 aa13.77□□□□□ -0.21
PRPF3-203ENST00000467514 SLC4A8Q2Y0W8 1093 aa13.77□□□□□ -0.21
PRPF3-203ENST00000467514 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
PRPF3-203ENST00000467514 MED23Q9ULK4 1368 aa13.76□□□□□ -0.21
PRPF3-203ENST00000467514 ZBTB48P10074 688 aaPredicted RBP13.76□□□□□ -0.21
PRPF3-203ENST00000467514 NBPF11Q86T75 865 aa13.76□□□□□ -0.21
PRPF3-203ENST00000467514 KIAA0825Q8IV33 1275 aa13.76□□□□□ -0.21
PRPF3-203ENST00000467514 JARID2Q92833 1246 aaPredicted RBP13.76□□□□□ -0.21
PRPF3-203ENST00000467514 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
PRPF3-203ENST00000467514 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
PRPF3-203ENST00000467514 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
PRPF3-203ENST00000467514 ARHGEF6Q15052 776 aa13.75□□□□□ -0.21
PRPF3-203ENST00000467514 SLC9C1Q4G0N8 1177 aa13.75□□□□□ -0.21
PRPF3-203ENST00000467514 DACT2Q5SW24 774 aa13.75□□□□□ -0.21
PRPF3-203ENST00000467514 STRIP1Q5VSL9 837 aa13.75□□□□□ -0.21
PRPF3-203ENST00000467514 WNK4Q96J92 1243 aa13.75□□□□□ -0.21
PRPF3-203ENST00000467514 CWC25Q9NXE8 425 aaPredicted RBP13.75□□□□□ -0.21
PRPF3-203ENST00000467514 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
PRPF3-203ENST00000467514 COL1A1P02452 1464 aaPredicted RBP13.74□□□□□ -0.21
PRPF3-203ENST00000467514 MYH3P11055 1940 aa13.74□□□□□ -0.21
PRPF3-203ENST00000467514 MYO1BO43795 1136 aa13.74□□□□□ -0.21
PRPF3-203ENST00000467514 IGHDP01880 384 aa13.74□□□□□ -0.21
PRPF3-203ENST00000467514 PCCAP05165 728 aaPredicted RBP13.74□□□□□ -0.21
PRPF3-203ENST00000467514 KCNJ4P48050 445 aa13.74□□□□□ -0.21
PRPF3-203ENST00000467514 SP3Q02447 781 aa13.74□□□□□ -0.21
PRPF3-203ENST00000467514 TRIM28Q13263 835 aaKnown RBP13.74□□□□□ -0.21
PRPF3-203ENST00000467514 CRHR2Q13324 411 aa13.74□□□□□ -0.21
PRPF3-203ENST00000467514 DLGAP5Q15398 846 aa13.74□□□□□ -0.21
PRPF3-203ENST00000467514 TTLL5Q6EMB2 1281 aa13.74□□□□□ -0.21
PRPF3-203ENST00000467514 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
PRPF3-203ENST00000467514 COA1Q9GZY4 146 aa13.74□□□□□ -0.21
PRPF3-203ENST00000467514 F6X3S4 739 aa13.73□□□□□ -0.21
PRPF3-203ENST00000467514 IGF2BP3O00425 579 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRPF3-203ENST00000467514 IREB2P48200 963 aaKnown RBP13.73□□□□□ -0.21
PRPF3-203ENST00000467514 MMP14P50281 582 aa13.73□□□□□ -0.21
PRPF3-203ENST00000467514 CCT4P50991 539 aaKnown RBP13.73□□□□□ -0.21
PRPF3-203ENST00000467514 LDLRAD1Q5T700 205 aa13.73□□□□□ -0.21
PRPF3-203ENST00000467514 CCDC191Q8NCU4 936 aa13.73□□□□□ -0.21
PRPF3-203ENST00000467514 ARMC5Q96C12 935 aa13.73□□□□□ -0.21
PRPF3-203ENST00000467514 CLMNQ96JQ2 1002 aa13.73□□□□□ -0.21
PRPF3-203ENST00000467514 DEFB129Q9H1M3 183 aa13.73□□□□□ -0.21
PRPF3-203ENST00000467514 CHMP4BQ9H444 224 aaKnown RBP13.73□□□□□ -0.21
PRPF3-203ENST00000467514 VEZTQ9HBM0 779 aa13.73□□□□□ -0.21
PRPF3-203ENST00000467514 ECM29Q5VYK3 1845 aa13.72□□□□□ -0.21
PRPF3-203ENST00000467514 DDX58O95786 925 aaKnown RBP13.72□□□□□ -0.21
PRPF3-203ENST00000467514 IGHMBP2P38935 993 aaKnown RBP13.72□□□□□ -0.21
PRPF3-203ENST00000467514 CTSWP56202 376 aa13.72□□□□□ -0.21
PRPF3-203ENST00000467514 GTF2IP78347 998 aa13.72□□□□□ -0.21
PRPF3-203ENST00000467514 FKBP5Q13451 457 aaPredicted RBP13.72□□□□□ -0.21
PRPF3-203ENST00000467514 HDAC1Q13547 482 aaPredicted RBP13.72□□□□□ -0.21
PRPF3-203ENST00000467514 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
PRPF3-203ENST00000467514 BRCA2P51587 3418 aa13.71□□□□□ -0.21
PRPF3-203ENST00000467514 WDHD1O75717 1129 aaPredicted RBP13.71□□□□□ -0.21
PRPF3-203ENST00000467514 CEP290O15078 2479 aa13.7□□□□□ -0.22
PRPF3-203ENST00000467514 TRIOBPQ9H2D6 2365 aa13.7□□□□□ -0.22
PRPF3-203ENST00000467514 ZNF646O15015 1829 aaPredicted RBP13.7□□□□□ -0.22
PRPF3-203ENST00000467514 CLRN2A0PK11 232 aa13.7□□□□□ -0.22
PRPF3-203ENST00000467514 F8W031 263 aaPredicted RBP13.7□□□□□ -0.22
PRPF3-203ENST00000467514 RBM5P52756 815 aaKnown RBP eCLIP13.7□□□□□ -0.22
PRPF3-203ENST00000467514 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
PRPF3-203ENST00000467514 BSDC1Q9NW68 430 aaPredicted RBP13.7□□□□□ -0.22
PRPF3-203ENST00000467514 MINPP1Q9UNW1 487 aa13.7□□□□□ -0.22
PRPF3-203ENST00000467514 PPP2R3BQ9Y5P8 575 aa13.7□□□□□ -0.22
PRPF3-203ENST00000467514 LAMB1P07942 1786 aa13.69□□□□□ -0.22
PRPF3-203ENST00000467514 PI4KAP2A4QPH2 592 aa13.69□□□□□ -0.22
PRPF3-203ENST00000467514 WTIPA6NIX2 430 aaPredicted RBP13.69□□□□□ -0.22
PRPF3-203ENST00000467514 H0YGN5 161 aa13.69□□□□□ -0.22
PRPF3-203ENST00000467514 KIF22Q14807 665 aa13.69□□□□□ -0.22
PRPF3-203ENST00000467514 TAF1CQ15572 869 aaPredicted RBP13.69□□□□□ -0.22
PRPF3-203ENST00000467514 BEND3Q5T5X7 828 aa13.69□□□□□ -0.22
PRPF3-203ENST00000467514 KSR2Q6VAB6 950 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms