RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 COL1A1P02452 1464 aaPredicted RBP11.31□□□□□ -0.6
PRPF3-202ENST00000467329 KIAA1551Q9HCM1 1747 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 SRGNP10124 158 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 HIBADHP31937 336 aaKnown RBP11.3□□□□□ -0.6
PRPF3-202ENST00000467329 GYG1P46976 350 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 STYK1Q6J9G0 422 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 SEC62Q99442 399 aaKnown RBP11.3□□□□□ -0.6
PRPF3-202ENST00000467329 CD2BP2O95400 341 aaKnown RBP11.3□□□□□ -0.6
PRPF3-202ENST00000467329 NEK4P51957 841 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 SLC9C2Q5TAH2 1124 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 VPS37DQ86XT2 251 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 MASTLQ96GX5 879 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 ALDH8A1Q9H2A2 487 aaPredicted RBP11.3□□□□□ -0.6
PRPF3-202ENST00000467329 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 CTNNA3Q9UI47 895 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 ZMYM6O95789 1325 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 SALL1Q9NSC2 1324 aa11.3□□□□□ -0.6
PRPF3-202ENST00000467329 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
PRPF3-202ENST00000467329 IDH1O75874 414 aaKnown RBP11.29□□□□□ -0.6
PRPF3-202ENST00000467329 CCDC129Q6ZRS4 1044 aa11.29□□□□□ -0.6
PRPF3-202ENST00000467329 TTC14Q96N46 770 aa11.29□□□□□ -0.6
PRPF3-202ENST00000467329 ANKIB1Q9P2G1 1089 aa11.29□□□□□ -0.6
PRPF3-202ENST00000467329 CIZ1Q9ULV3 898 aaPredicted RBP11.29□□□□□ -0.6
PRPF3-202ENST00000467329 GPSM2P81274 684 aa11.29□□□□□ -0.6
PRPF3-202ENST00000467329 ZNF804AQ7Z570 1209 aa11.29□□□□□ -0.6
PRPF3-202ENST00000467329 GGA1Q9UJY5 639 aa11.29□□□□□ -0.6
PRPF3-202ENST00000467329 ZNF532Q9HCE3 1301 aa11.29□□□□□ -0.6
PRPF3-202ENST00000467329 MYO5AQ9Y4I1 1855 aaKnown RBP11.29□□□□□ -0.6
PRPF3-202ENST00000467329 CHGBP05060 677 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 HSPD1P10809 573 aaKnown RBP11.28□□□□□ -0.6
PRPF3-202ENST00000467329 VPS53Q5VIR6 699 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 WWC3Q9ULE0 1092 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 CYP46A1Q9Y6A2 500 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 C10orf71Q711Q0 1435 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 DLEC1Q9Y238 1755 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 LAMA4Q16363 1823 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 GPAA1O43292 621 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 DDIT3P35638 169 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 ALX1Q15699 326 aa11.28□□□□□ -0.6
PRPF3-202ENST00000467329 ZGPATQ8N5A5 531 aaKnown RBP11.28□□□□□ -0.6
PRPF3-202ENST00000467329 JAKMIP1Q96N16 626 aaKnown RBP11.28□□□□□ -0.6
PRPF3-202ENST00000467329 GNAT2P19087 354 aa11.27□□□□□ -0.6
PRPF3-202ENST00000467329 MSL1Q68DK7 614 aa11.27□□□□□ -0.6
PRPF3-202ENST00000467329 TDRD7Q8NHU6 1098 aaKnown RBP11.27□□□□□ -0.6
PRPF3-202ENST00000467329 CACNA1SQ13698 1873 aa11.27□□□□□ -0.6
PRPF3-202ENST00000467329 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.61
PRPF3-202ENST00000467329 KLRK1P26718 216 aa11.27□□□□□ -0.61
PRPF3-202ENST00000467329 CUL4AQ13619 759 aa11.27□□□□□ -0.61
PRPF3-202ENST00000467329 SPTY2D1Q68D10 685 aaPredicted RBP11.27□□□□□ -0.61
PRPF3-202ENST00000467329 RUFY3Q7L099 469 aa11.27□□□□□ -0.61
PRPF3-202ENST00000467329 DEFB132Q7Z7B7 95 aa11.27□□□□□ -0.61
PRPF3-202ENST00000467329 MAGEB6Q8N7X4 407 aa11.27□□□□□ -0.61
PRPF3-202ENST00000467329 PUS7LQ9H0K6 701 aaKnown RBP11.27□□□□□ -0.61
PRPF3-202ENST00000467329 CHMP5Q9NZZ3 219 aa11.27□□□□□ -0.61
PRPF3-202ENST00000467329 LRP2BPQ9P2M1 347 aa11.27□□□□□ -0.61
PRPF3-202ENST00000467329 UFL1O94874 794 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 SLFNL1Q499Z3 407 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 WDR66Q8TBY9 1149 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 KIF13BQ9NQT8 1826 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 WTIPA6NIX2 430 aaPredicted RBP11.26□□□□□ -0.61
PRPF3-202ENST00000467329 FOXP2O15409 715 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 IL1R1P14778 569 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 CASTP20810 708 aaKnown RBP11.26□□□□□ -0.61
PRPF3-202ENST00000467329 ANKRD1Q15327 319 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 BLOC1S2Q6QNY1 142 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 C2CD5Q86YS7 1000 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 TBC1D16Q8TBP0 767 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 INTS4Q96HW7 963 aaKnown RBP11.26□□□□□ -0.61
PRPF3-202ENST00000467329 STRBPQ96SI9 672 aaKnown RBP11.26□□□□□ -0.61
PRPF3-202ENST00000467329 CWC22Q9HCG8 908 aaKnown RBP11.26□□□□□ -0.61
PRPF3-202ENST00000467329 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 TIAM2Q8IVF5 1701 aa11.26□□□□□ -0.61
PRPF3-202ENST00000467329 H0YIN7 160 aa11.25□□□□□ -0.61
PRPF3-202ENST00000467329 CYP21A2P08686 494 aa11.25□□□□□ -0.61
PRPF3-202ENST00000467329 RPS6KB1P23443 525 aa11.25□□□□□ -0.61
PRPF3-202ENST00000467329 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
PRPF3-202ENST00000467329 AIDAQ96BJ3 306 aa11.25□□□□□ -0.61
PRPF3-202ENST00000467329 ZSCAN31Q96LW9 406 aaPredicted RBP11.25□□□□□ -0.61
PRPF3-202ENST00000467329 UPF3BQ9BZI7 483 aaKnown RBP11.25□□□□□ -0.61
PRPF3-202ENST00000467329 ADCK5Q3MIX3 580 aa11.25□□□□□ -0.61
PRPF3-202ENST00000467329 TMX3Q96JJ7 454 aa11.25□□□□□ -0.61
PRPF3-202ENST00000467329 TMX4Q9H1E5 349 aaPredicted RBP11.25□□□□□ -0.61
PRPF3-202ENST00000467329 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
PRPF3-202ENST00000467329 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
PRPF3-202ENST00000467329 HSP90AA1P07900 732 aaKnown RBP11.24□□□□□ -0.61
PRPF3-202ENST00000467329 IMMTQ16891 758 aaKnown RBP11.24□□□□□ -0.61
PRPF3-202ENST00000467329 GRIPAP1Q4V328 841 aa11.24□□□□□ -0.61
PRPF3-202ENST00000467329 CC2D2BQ6DHV5 1058 aa11.24□□□□□ -0.61
PRPF3-202ENST00000467329 TXNRD3Q86VQ6 643 aa11.24□□□□□ -0.61
PRPF3-202ENST00000467329 NEK1Q96PY6 1258 aa11.24□□□□□ -0.61
PRPF3-202ENST00000467329 RAI14Q9P0K7 980 aa11.24□□□□□ -0.61
PRPF3-202ENST00000467329 LIMCH1Q9UPQ0 1083 aa11.24□□□□□ -0.61
PRPF3-202ENST00000467329 FRAT2O75474 233 aaPredicted RBP11.24□□□□□ -0.61
PRPF3-202ENST00000467329 MBD4O95243 580 aa11.24□□□□□ -0.61
PRPF3-202ENST00000467329 CYP7A1P22680 504 aa11.24□□□□□ -0.61
PRPF3-202ENST00000467329 SH2B1Q9NRF2 756 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms