RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 BICD2Q8TD16 824 aa17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 DDX11Q96FC9 970 aa17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 CCDC85AQ96PX6 553 aaPredicted RBP17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 TRMT112Q9UI30 125 aaKnown RBP17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 CFAP45Q9UL16 551 aa17.31■□□□□ 0.36
PRPF38B-204ENST00000467302 A0A1B0GUL7 405 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 CAVIN2O95810 425 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 HMGB1P09429 215 aaKnown RBP17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 DDX46Q7L014 1031 aaKnown RBP17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 ZNF34Q8IZ26 560 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 CCDC94Q9BW85 323 aaPredicted RBP17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 MYH14Q7Z406 1995 aaKnown RBP17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 H3BQV1 296 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 IRS4O14654 1257 aaPredicted RBP17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 ZNF165P49910 485 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 CTSWP56202 376 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 ITPK1Q13572 414 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 IFFO2Q5TF58 517 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 NAA16Q6N069 864 aaPredicted RBP17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 CCDC186Q7Z3E2 898 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 AGXT2Q9BYV1 514 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 AKAP2Q9Y2D5 859 aa17.3■□□□□ 0.36
PRPF38B-204ENST00000467302 DHX32Q7L7V1 743 aaKnown RBP17.29■□□□□ 0.36
PRPF38B-204ENST00000467302 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
PRPF38B-204ENST00000467302 NSUN7Q8NE18 718 aaKnown RBP17.29■□□□□ 0.36
PRPF38B-204ENST00000467302 TTLL11Q8NHH1 800 aa17.29■□□□□ 0.36
PRPF38B-204ENST00000467302 LRP5O75197 1615 aa17.29■□□□□ 0.36
PRPF38B-204ENST00000467302 UBN2Q6ZU65 1347 aa17.29■□□□□ 0.36
PRPF38B-204ENST00000467302 CTDNEP1O95476 244 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 EXOSC10Q01780 885 aaKnown RBP17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 AK7Q96M32 723 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 LRRC2Q9BYS8 371 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 DNAJC25Q9H1X3 360 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 RCOR1Q9UKL0 485 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 NHSQ6T4R5 1651 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 LAMB2P55268 1798 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 PDE8AO60658 829 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 DSCC1Q9BVC3 393 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 TRIM5Q9C035 493 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 HELLSQ9NRZ9 838 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 NRBP1Q9UHY1 535 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 USP21Q9UK80 565 aa17.28■□□□□ 0.36
PRPF38B-204ENST00000467302 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.36
PRPF38B-204ENST00000467302 RIOK3O14730 519 aaKnown RBP17.27■□□□□ 0.36
PRPF38B-204ENST00000467302 KCNQ2O43526 872 aa17.27■□□□□ 0.36
PRPF38B-204ENST00000467302 IFIT1P09914 478 aaKnown RBP17.27■□□□□ 0.36
PRPF38B-204ENST00000467302 ITGA6P23229 1130 aa17.27■□□□□ 0.36
PRPF38B-204ENST00000467302 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.36
PRPF38B-204ENST00000467302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.27■□□□□ 0.36
PRPF38B-204ENST00000467302 PAG1Q9NWQ8 432 aa17.27■□□□□ 0.36
PRPF38B-204ENST00000467302 ANKRD18BA2A2Z9 1011 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 GOLIM4O00461 696 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 CTIFO43310 598 aaKnown RBP17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 CDC25BP30305 580 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 LRMPQ12912 555 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 IQCB1Q15051 598 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 ZSCAN25Q6NSZ9 544 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 GREM2Q9H772 168 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 SALL1Q9NSC2 1324 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 FAM177BA6PVY3 158 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 CAMTA2O94983 1202 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 PARP10Q53GL7 1025 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 CCDC158Q5M9N0 1113 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 ZMYM1Q5SVZ6 1142 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 GORABQ5T7V8 394 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 LDHAL6AQ6ZMR3 332 aa17.26■□□□□ 0.35
PRPF38B-204ENST00000467302 BTAF1O14981 1849 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 PTPDC1A2A3K4 754 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 CTAGE5O15320 804 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 ATL3Q6DD88 541 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 SARM1Q6SZW1 724 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 RIPOR2Q9Y4F9 1068 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 FGD1P98174 961 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 APOBRQ0VD83 1088 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 SNW1Q13573 536 aaKnown RBP17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 SLFNL1Q499Z3 407 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 DRC7Q8IY82 874 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 GOLPH3LQ9H4A5 285 aa17.25■□□□□ 0.35
PRPF38B-204ENST00000467302 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
PRPF38B-204ENST00000467302 METTL24Q5JXM2 366 aa17.24■□□□□ 0.35
PRPF38B-204ENST00000467302 TTC39AQ5SRH9 613 aa17.24■□□□□ 0.35
PRPF38B-204ENST00000467302 SMAP1Q8IYB5 467 aaPredicted RBP17.24■□□□□ 0.35
PRPF38B-204ENST00000467302 CERKQ8TCT0 537 aa17.24■□□□□ 0.35
PRPF38B-204ENST00000467302 PKNOX2Q96KN3 472 aa17.24■□□□□ 0.35
PRPF38B-204ENST00000467302 ARID3AQ99856 593 aa17.24■□□□□ 0.35
PRPF38B-204ENST00000467302 FTOQ9C0B1 505 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRPF38B-204ENST00000467302 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 CEBPZQ03701 1054 aaKnown RBP17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 C11orf57Q6ZUT1 292 aaPredicted RBP17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 CCAR1Q8IX12 1150 aaKnown RBP17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 ENGASEQ8NFI3 743 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 ANKRD7Q92527 254 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms