RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 MAP3K12Q12852 859 aa24.29■■□□□ 1.48
CCDC78-207ENST00000466708 C3orf67Q6ZVT6 689 aa24.29■■□□□ 1.48
CCDC78-207ENST00000466708 QTRT2Q9H974 415 aaKnown RBP24.29■■□□□ 1.48
CCDC78-207ENST00000466708 TRAPPC3LQ5T215 181 aa24.28■■□□□ 1.48
CCDC78-207ENST00000466708 SMIM5Q71RC9 77 aa24.28■■□□□ 1.48
CCDC78-207ENST00000466708 FBXL16Q8N461 479 aa24.28■■□□□ 1.48
CCDC78-207ENST00000466708 ZNF532Q9HCE3 1301 aa24.28■■□□□ 1.48
CCDC78-207ENST00000466708 MYO5AQ9Y4I1 1855 aaKnown RBP24.28■■□□□ 1.48
CCDC78-207ENST00000466708 SNAP23O00161 211 aa24.28■■□□□ 1.48
CCDC78-207ENST00000466708 F13A1P00488 732 aa24.28■■□□□ 1.48
CCDC78-207ENST00000466708 RFC4P35249 363 aa24.28■■□□□ 1.48
CCDC78-207ENST00000466708 GTF3C6Q969F1 213 aa24.28■■□□□ 1.48
CCDC78-207ENST00000466708 TCRBV5S4A2TA0A5A2 114 aa24.27■■□□□ 1.48
CCDC78-207ENST00000466708 ADRA2BP18089 450 aa24.27■■□□□ 1.48
CCDC78-207ENST00000466708 BCAMP50895 628 aa24.27■■□□□ 1.48
CCDC78-207ENST00000466708 TTLL5Q6EMB2 1281 aa24.27■■□□□ 1.48
CCDC78-207ENST00000466708 A0A1B0GUL6 1792 aa24.26■■□□□ 1.47
CCDC78-207ENST00000466708 MBD3O95983 291 aa24.26■■□□□ 1.47
CCDC78-207ENST00000466708 BRF1Q92994 677 aa24.26■■□□□ 1.47
CCDC78-207ENST00000466708 CHMP4CQ96CF2 233 aa24.26■■□□□ 1.47
CCDC78-207ENST00000466708 GNL3LQ9NVN8 582 aaKnown RBP24.26■■□□□ 1.47
CCDC78-207ENST00000466708 WWC3Q9ULE0 1092 aa24.26■■□□□ 1.47
CCDC78-207ENST00000466708 MTMR6Q9Y217 621 aa24.26■■□□□ 1.47
CCDC78-207ENST00000466708 ZNF213O14771 459 aa24.25■■□□□ 1.47
CCDC78-207ENST00000466708 LARP1BQ659C4 914 aaKnown RBP24.25■■□□□ 1.47
CCDC78-207ENST00000466708 MINPP1Q9UNW1 487 aa24.25■■□□□ 1.47
CCDC78-207ENST00000466708 C4AP0C0L4 1744 aa24.25■■□□□ 1.47
CCDC78-207ENST00000466708 ZNF804BA4D1E1 1349 aa24.25■■□□□ 1.47
CCDC78-207ENST00000466708 COL4A1P02462 1669 aa24.24■■□□□ 1.47
CCDC78-207ENST00000466708 A0A0G2JLW4 131 aa24.24■■□□□ 1.47
CCDC78-207ENST00000466708 PFKFB2O60825 505 aa24.24■■□□□ 1.47
CCDC78-207ENST00000466708 RPS8P62241 208 aaKnown RBP24.24■■□□□ 1.47
CCDC78-207ENST00000466708 STK3Q13188 491 aa24.24■■□□□ 1.47
CCDC78-207ENST00000466708 FAM196AQ6ZSG2 479 aa24.24■■□□□ 1.47
CCDC78-207ENST00000466708 LLPHQ9BRT6 129 aaKnown RBP24.24■■□□□ 1.47
CCDC78-207ENST00000466708 AMIGO3Q86WK7 504 aa24.24■■□□□ 1.47
CCDC78-207ENST00000466708 TMEM87AQ8NBN3 555 aa24.24■■□□□ 1.47
CCDC78-207ENST00000466708 AIDAQ96BJ3 306 aa24.24■■□□□ 1.47
CCDC78-207ENST00000466708 CHAMP1Q96JM3 812 aa24.24■■□□□ 1.47
CCDC78-207ENST00000466708 ZMYM6O95789 1325 aa24.23■■□□□ 1.47
CCDC78-207ENST00000466708 NCLP19338 710 aaKnown RBP24.23■■□□□ 1.47
CCDC78-207ENST00000466708 ALX1Q15699 326 aa24.23■■□□□ 1.47
CCDC78-207ENST00000466708 CELF1Q92879 486 aaKnown RBP24.23■■□□□ 1.47
CCDC78-207ENST00000466708 CARMIL3Q8ND23 1372 aa24.22■■□□□ 1.47
CCDC78-207ENST00000466708 WDR19Q8NEZ3 1342 aa24.22■■□□□ 1.47
CCDC78-207ENST00000466708 HMGB2P26583 209 aaKnown RBP24.22■■□□□ 1.47
CCDC78-207ENST00000466708 MRE11P49959 708 aa24.22■■□□□ 1.47
CCDC78-207ENST00000466708 CAVIN4Q5BKX8 364 aa24.22■■□□□ 1.47
CCDC78-207ENST00000466708 SLC27A3Q5K4L6 730 aa24.22■■□□□ 1.47
CCDC78-207ENST00000466708 NCOA7Q8NI08 942 aa24.22■■□□□ 1.47
CCDC78-207ENST00000466708 GPT2Q8TD30 523 aa24.22■■□□□ 1.47
CCDC78-207ENST00000466708 ZNF274Q96GC6 653 aaPredicted RBP24.22■■□□□ 1.47
CCDC78-207ENST00000466708 STRBPQ96SI9 672 aaKnown RBP24.22■■□□□ 1.47
CCDC78-207ENST00000466708 LRRC2Q9BYS8 371 aa24.22■■□□□ 1.47
CCDC78-207ENST00000466708 MAGEB6Q8N7X4 407 aa24.21■■□□□ 1.47
CCDC78-207ENST00000466708 ANKRD2Q9GZV1 360 aa24.21■■□□□ 1.47
CCDC78-207ENST00000466708 LRRC4BQ9NT99 713 aa24.21■■□□□ 1.47
CCDC78-207ENST00000466708 TAF1P21675 1872 aa24.21■■□□□ 1.47
CCDC78-207ENST00000466708 MCM5P33992 734 aa24.21■■□□□ 1.47
CCDC78-207ENST00000466708 EVCP57679 992 aa24.21■■□□□ 1.47
CCDC78-207ENST00000466708 HAND2P61296 217 aa24.21■■□□□ 1.47
CCDC78-207ENST00000466708 VPS37CA5D8V6 355 aaPredicted RBP24.2■■□□□ 1.46
CCDC78-207ENST00000466708 CAVIN1Q6NZI2 390 aaKnown RBP24.2■■□□□ 1.46
CCDC78-207ENST00000466708 RALYLQ86SE5 291 aaKnown RBP24.2■■□□□ 1.46
CCDC78-207ENST00000466708 PATL2C9JE40 543 aaKnown RBP24.19■■□□□ 1.46
CCDC78-207ENST00000466708 PHF14O94880 888 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 GNAT2P19087 354 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 CSPP1Q1MSJ5 1256 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 KRT27Q7Z3Y8 459 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 MB21D2Q8IYB1 491 aaPredicted RBP24.19■■□□□ 1.46
CCDC78-207ENST00000466708 TCHHQ07283 1943 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 APPP05067 770 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 ZNF445P59923 1031 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 APOBRQ0VD83 1088 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 SCRN1Q12765 414 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 TRDNQ13061 729 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 USP48Q86UV5 1035 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 SMARCC2Q8TAQ2 1214 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 LRP2BPQ9P2M1 347 aa24.19■■□□□ 1.46
CCDC78-207ENST00000466708 SEMA3EO15041 775 aa24.18■■□□□ 1.46
CCDC78-207ENST00000466708 NPHP1O15259 732 aa24.18■■□□□ 1.46
CCDC78-207ENST00000466708 FOXD4L6Q3SYB3 417 aaPredicted RBP24.18■■□□□ 1.46
CCDC78-207ENST00000466708 FOXD4L3Q6VB84 417 aaPredicted RBP24.18■■□□□ 1.46
CCDC78-207ENST00000466708 DENND2AQ9ULE3 1009 aa24.18■■□□□ 1.46
CCDC78-207ENST00000466708 KIF3AQ9Y496 699 aa24.18■■□□□ 1.46
CCDC78-207ENST00000466708 PNPLA7Q6ZV29 1317 aa24.17■■□□□ 1.46
CCDC78-207ENST00000466708 GYG1P46976 350 aa24.17■■□□□ 1.46
CCDC78-207ENST00000466708 HMGN5P82970 282 aaKnown RBP24.17■■□□□ 1.46
CCDC78-207ENST00000466708 VPS37DQ86XT2 251 aa24.17■■□□□ 1.46
CCDC78-207ENST00000466708 UBR3Q6ZT12 1888 aa24.17■■□□□ 1.46
CCDC78-207ENST00000466708 MBD4O95243 580 aa24.17■■□□□ 1.46
CCDC78-207ENST00000466708 TM4SF1P30408 202 aa24.17■■□□□ 1.46
CCDC78-207ENST00000466708 NFIXQ14938 502 aa24.17■■□□□ 1.46
CCDC78-207ENST00000466708 GRPEL1Q9HAV7 217 aa24.17■■□□□ 1.46
CCDC78-207ENST00000466708 PRC1O43663 620 aa24.16■■□□□ 1.46
CCDC78-207ENST00000466708 XRCC6P12956 609 aaKnown RBP eCLIP24.16■■□□□ 1.46
CCDC78-207ENST00000466708 PDIA3P30101 505 aaKnown RBP24.16■■□□□ 1.46
CCDC78-207ENST00000466708 ZSCAN23Q3MJ62 389 aa24.16■■□□□ 1.46
CCDC78-207ENST00000466708 FBXO33Q7Z6M2 555 aa24.16■■□□□ 1.46
CCDC78-207ENST00000466708 FAM84BQ96KN1 310 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms