RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 ZSCAN25Q6NSZ9 544 aa22.66■■□□□ 1.22
LIMS2-212ENST00000466410 MTERF4Q7Z6M4 381 aaKnown RBP22.66■■□□□ 1.22
LIMS2-212ENST00000466410 CARD10Q9BWT7 1032 aa22.66■■□□□ 1.22
LIMS2-212ENST00000466410 STRN4Q9NRL3 753 aa22.66■■□□□ 1.22
LIMS2-212ENST00000466410 ZFYP08048 801 aaPredicted RBP22.66■■□□□ 1.22
LIMS2-212ENST00000466410 FAM160A1Q05DH4 1040 aa22.66■■□□□ 1.22
LIMS2-212ENST00000466410 TAF7LQ5H9L4 462 aa22.66■■□□□ 1.22
LIMS2-212ENST00000466410 SYNE4Q8N205 404 aa22.66■■□□□ 1.22
LIMS2-212ENST00000466410 FSIP1Q8NA03 581 aa22.66■■□□□ 1.22
LIMS2-212ENST00000466410 CLIP2Q9UDT6 1046 aa22.66■■□□□ 1.22
LIMS2-212ENST00000466410 KINO60870 393 aaKnown RBP22.65■■□□□ 1.22
LIMS2-212ENST00000466410 TRIM28Q13263 835 aaKnown RBP22.65■■□□□ 1.22
LIMS2-212ENST00000466410 STX1AQ16623 288 aa22.65■■□□□ 1.22
LIMS2-212ENST00000466410 ARID3AQ99856 593 aa22.65■■□□□ 1.22
LIMS2-212ENST00000466410 FBXO3Q9UK99 471 aa22.65■■□□□ 1.22
LIMS2-212ENST00000466410 SHANK3Q9BYB0 1731 aa22.65■■□□□ 1.22
LIMS2-212ENST00000466410 GOLGA6L19H0YKK7 550 aa22.65■■□□□ 1.22
LIMS2-212ENST00000466410 PRC1O43663 620 aa22.65■■□□□ 1.22
LIMS2-212ENST00000466410 PCCAP05165 728 aaPredicted RBP22.65■■□□□ 1.22
LIMS2-212ENST00000466410 ZNF710Q8N1W2 664 aa22.65■■□□□ 1.22
LIMS2-212ENST00000466410 APPBP2Q92624 585 aa22.65■■□□□ 1.22
LIMS2-212ENST00000466410 IFIT5Q13325 482 aaKnown RBP22.64■■□□□ 1.22
LIMS2-212ENST00000466410 CCDC144BQ3MJ40 725 aa22.64■■□□□ 1.22
LIMS2-212ENST00000466410 RAB11FIP4Q86YS3 637 aa22.64■■□□□ 1.22
LIMS2-212ENST00000466410 CCDC144CPQ8IYA2 1237 aa22.64■■□□□ 1.22
LIMS2-212ENST00000466410 MB21D2Q8IYB1 491 aaPredicted RBP22.64■■□□□ 1.22
LIMS2-212ENST00000466410 CSF1RP07333 972 aa22.64■■□□□ 1.21
LIMS2-212ENST00000466410 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.21
LIMS2-212ENST00000466410 ERCC4Q92889 916 aaPredicted RBP22.64■■□□□ 1.21
LIMS2-212ENST00000466410 TMOD3Q9NYL9 352 aa22.64■■□□□ 1.21
LIMS2-212ENST00000466410 PCDHA7Q9UN72 937 aa22.64■■□□□ 1.21
LIMS2-212ENST00000466410 KLF18A0A0U1RQI7 1052 aa22.63■■□□□ 1.21
LIMS2-212ENST00000466410 CHMP4CQ96CF2 233 aa22.63■■□□□ 1.21
LIMS2-212ENST00000466410 ASAP1Q9ULH1 1129 aa22.63■■□□□ 1.21
LIMS2-212ENST00000466410 HPS5Q9UPZ3 1129 aa22.63■■□□□ 1.21
LIMS2-212ENST00000466410 ABCA3Q99758 1704 aa22.63■■□□□ 1.21
LIMS2-212ENST00000466410 ANTXR2P58335 489 aa22.63■■□□□ 1.21
LIMS2-212ENST00000466410 ZBTB38Q8NAP3 1195 aaPredicted RBP22.63■■□□□ 1.21
LIMS2-212ENST00000466410 CACTINQ8WUQ7 758 aaKnown RBP22.63■■□□□ 1.21
LIMS2-212ENST00000466410 PLA2G12BQ9BX93 195 aa22.63■■□□□ 1.21
LIMS2-212ENST00000466410 RIOK3O14730 519 aaKnown RBP22.62■■□□□ 1.21
LIMS2-212ENST00000466410 GJB4Q9NTQ9 266 aa22.62■■□□□ 1.21
LIMS2-212ENST00000466410 RTEL1Q9NZ71 1219 aa22.62■■□□□ 1.21
LIMS2-212ENST00000466410 GOLGA8BA8MQT2 603 aa22.62■■□□□ 1.21
LIMS2-212ENST00000466410 GPAA1O43292 621 aa22.62■■□□□ 1.21
LIMS2-212ENST00000466410 POLR3DP05423 398 aaPredicted RBP22.62■■□□□ 1.21
LIMS2-212ENST00000466410 SARM1Q6SZW1 724 aa22.62■■□□□ 1.21
LIMS2-212ENST00000466410 KIF6Q6ZMV9 814 aa22.62■■□□□ 1.21
LIMS2-212ENST00000466410 CDC25BP30305 580 aa22.61■■□□□ 1.21
LIMS2-212ENST00000466410 CHAF1AQ13111 956 aaPredicted RBP22.61■■□□□ 1.21
LIMS2-212ENST00000466410 C8orf76Q96K31 380 aa22.61■■□□□ 1.21
LIMS2-212ENST00000466410 TOGARAM1Q9Y4F4 1720 aa22.61■■□□□ 1.21
LIMS2-212ENST00000466410 ATP2B3Q16720 1220 aa22.61■■□□□ 1.21
LIMS2-212ENST00000466410 FMR1NBQ8N0W7 255 aaPredicted RBP22.61■■□□□ 1.21
LIMS2-212ENST00000466410 ORC3Q9UBD5 711 aaPredicted RBP22.61■■□□□ 1.21
LIMS2-212ENST00000466410 CLIC4Q9Y696 253 aa22.61■■□□□ 1.21
LIMS2-212ENST00000466410 RIC1Q4ADV7 1423 aa22.61■■□□□ 1.21
LIMS2-212ENST00000466410 A0A1B0GVL5 298 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 MCAMP43121 646 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 DHX40Q8IX18 779 aaKnown RBP22.6■■□□□ 1.21
LIMS2-212ENST00000466410 LINC00301Q8NCQ3 95 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 NCOA7Q8NI08 942 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 MRPS27Q92552 414 aaKnown RBP22.6■■□□□ 1.21
LIMS2-212ENST00000466410 RIPOR2Q9Y4F9 1068 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 GPTP24298 496 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 METTL24Q5JXM2 366 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 ADALQ6DHV7 355 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 FBXO18Q8NFZ0 1043 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 ANO10Q9NW15 660 aa22.6■■□□□ 1.21
LIMS2-212ENST00000466410 BECN2A8MW95 431 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 ZNF213O14771 459 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 EVA1CP58658 441 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 HLFQ16534 295 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 RALYLQ86SE5 291 aaKnown RBP22.59■■□□□ 1.21
LIMS2-212ENST00000466410 PIGBQ92521 554 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 BCL2L12Q9HB09 334 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 DHX16O60231 1041 aaKnown RBP22.59■■□□□ 1.21
LIMS2-212ENST00000466410 LDHAL6AQ6ZMR3 332 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 FBXW7Q969H0 707 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 C16orf45Q96MC5 204 aaPredicted RBP22.59■■□□□ 1.21
LIMS2-212ENST00000466410 GREM2Q9H772 168 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 DENND2AQ9ULE3 1009 aa22.59■■□□□ 1.21
LIMS2-212ENST00000466410 NDUFA8P51970 172 aa22.58■■□□□ 1.21
LIMS2-212ENST00000466410 MRFAP1L1Q96HT8 127 aa22.58■■□□□ 1.21
LIMS2-212ENST00000466410 MYH7P12883 1935 aa22.58■■□□□ 1.21
LIMS2-212ENST00000466410 ITGA6P23229 1130 aa22.58■■□□□ 1.21
LIMS2-212ENST00000466410 ARID5BQ14865 1188 aa22.58■■□□□ 1.21
LIMS2-212ENST00000466410 STK38Q15208 465 aa22.58■■□□□ 1.21
LIMS2-212ENST00000466410 SDF4Q9BRK5 362 aa22.58■■□□□ 1.21
LIMS2-212ENST00000466410 NBPF3Q9H094 633 aa22.58■■□□□ 1.21
LIMS2-212ENST00000466410 ABCC12Q96J65 1359 aa22.58■■□□□ 1.2
LIMS2-212ENST00000466410 CPLX1O14810 134 aa22.57■■□□□ 1.2
LIMS2-212ENST00000466410 GIGYF2Q6Y7W6 1299 aaKnown RBP22.57■■□□□ 1.2
LIMS2-212ENST00000466410 TTLL11Q8NHH1 800 aa22.57■■□□□ 1.2
LIMS2-212ENST00000466410 NKX2-3Q8TAU0 364 aa22.57■■□□□ 1.2
LIMS2-212ENST00000466410 AKAP11Q9UKA4 1901 aa22.57■■□□□ 1.2
LIMS2-212ENST00000466410 MAP3K15Q6ZN16 1313 aa22.57■■□□□ 1.2
LIMS2-212ENST00000466410 A0A1W2PQ27 194 aa22.57■■□□□ 1.2
LIMS2-212ENST00000466410 A0A1W2PQ64 194 aa22.57■■□□□ 1.2
LIMS2-212ENST00000466410 A0A1W2PQD8 194 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms