RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PRDM10Q9NQV6 1147 aa8.57□□□□□ -1.04
NCL-208ENST00000466274 PHF24Q9UPV7 400 aa8.57□□□□□ -1.04
NCL-208ENST00000466274 PAPPAQ13219 1627 aa8.57□□□□□ -1.04
NCL-208ENST00000466274 SHISA8B8ZZ34 492 aa8.56□□□□□ -1.04
NCL-208ENST00000466274 C2CD2LO14523 706 aa8.56□□□□□ -1.04
NCL-208ENST00000466274 IL2RBP14784 551 aa8.56□□□□□ -1.04
NCL-208ENST00000466274 GDF10P55107 478 aa8.56□□□□□ -1.04
NCL-208ENST00000466274 FOXK2Q01167 660 aa8.56□□□□□ -1.04
NCL-208ENST00000466274 MLLT1Q03111 559 aaPredicted RBP8.56□□□□□ -1.04
NCL-208ENST00000466274 GALNT6Q8NCL4 622 aa8.56□□□□□ -1.04
NCL-208ENST00000466274 ABHD17AQ96GS6 310 aa8.56□□□□□ -1.04
NCL-208ENST00000466274 CCNL1Q9UK58 526 aaPredicted RBP8.56□□□□□ -1.04
NCL-208ENST00000466274 PPIP5K1Q6PFW1 1433 aa8.55□□□□□ -1.04
NCL-208ENST00000466274 INHAP05111 366 aa8.55□□□□□ -1.04
NCL-208ENST00000466274 PLA2G4AP47712 749 aa8.55□□□□□ -1.04
NCL-208ENST00000466274 SNRPNP63162 240 aaKnown RBP8.55□□□□□ -1.04
NCL-208ENST00000466274 LBRQ14739 615 aaKnown RBP8.55□□□□□ -1.04
NCL-208ENST00000466274 EFHC2Q5JST6 749 aa8.55□□□□□ -1.04
NCL-208ENST00000466274 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
NCL-208ENST00000466274 PLPP7Q8NBV4 271 aa8.55□□□□□ -1.04
NCL-208ENST00000466274 AIDAQ96BJ3 306 aa8.55□□□□□ -1.04
NCL-208ENST00000466274 SYTL4Q96C24 671 aaPredicted RBP8.55□□□□□ -1.04
NCL-208ENST00000466274 SBF2Q86WG5 1849 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 PLEKHG2Q9H7P9 1386 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 BNIP3LO60238 219 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 ITGB2P05107 769 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 CTBSQ01459 385 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 SEMA3FQ13275 785 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 WASHC4Q2M389 1173 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 PLA2G4EQ3MJ16 856 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 ARHGEF25Q86VW2 580 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 NLRP2Q9NX02 1062 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 SERTAD1Q9UHV2 236 aa8.54□□□□□ -1.04
NCL-208ENST00000466274 BMP4P12644 408 aa8.53□□□□□ -1.04
NCL-208ENST00000466274 CTCFP49711 727 aaPredicted RBP8.53□□□□□ -1.04
NCL-208ENST00000466274 KCNQ4P56696 695 aa8.53□□□□□ -1.04
NCL-208ENST00000466274 MAP7D1Q3KQU3 841 aa8.53□□□□□ -1.04
NCL-208ENST00000466274 TBC1D9Q6ZT07 1266 aa8.53□□□□□ -1.04
NCL-208ENST00000466274 CRISPLD1Q9H336 500 aa8.53□□□□□ -1.04
NCL-208ENST00000466274 NDFIP2Q9NV92 336 aa8.53□□□□□ -1.04
NCL-208ENST00000466274 ATXN7L1Q9ULK2 861 aaPredicted RBP8.53□□□□□ -1.04
NCL-208ENST00000466274 WDR90Q96KV7 1748 aa8.52□□□□□ -1.05
NCL-208ENST00000466274 SMTNP53814 917 aa8.52□□□□□ -1.05
NCL-208ENST00000466274 TGFB2P61812 414 aa8.52□□□□□ -1.05
NCL-208ENST00000466274 C9orf131Q5VYM1 1079 aa8.52□□□□□ -1.05
NCL-208ENST00000466274 DDX54Q8TDD1 881 aaKnown RBP8.52□□□□□ -1.05
NCL-208ENST00000466274 EDARADDQ8WWZ3 215 aa8.52□□□□□ -1.05
NCL-208ENST00000466274 RRAGCQ9HB90 399 aa8.52□□□□□ -1.05
NCL-208ENST00000466274 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
NCL-208ENST00000466274 CPSF1Q10570 1443 aaKnown RBP8.52□□□□□ -1.05
NCL-208ENST00000466274 NHSQ6T4R5 1651 aa8.51□□□□□ -1.05
NCL-208ENST00000466274 PIK3CDO00329 1044 aa8.51□□□□□ -1.05
NCL-208ENST00000466274 MSTNO14793 375 aa8.51□□□□□ -1.05
NCL-208ENST00000466274 FGFR3P22607 806 aa8.51□□□□□ -1.05
NCL-208ENST00000466274 SRPK2P78362 688 aaKnown RBP8.51□□□□□ -1.05
NCL-208ENST00000466274 MCM6Q14566 821 aa8.51□□□□□ -1.05
NCL-208ENST00000466274 NIFKQ9BYG3 293 aaKnown RBP8.51□□□□□ -1.05
NCL-208ENST00000466274 ZCCHC2Q9C0B9 1178 aaKnown RBP8.51□□□□□ -1.05
NCL-208ENST00000466274 C10orf71Q711Q0 1435 aa8.51□□□□□ -1.05
NCL-208ENST00000466274 ARHGEF28Q8N1W1 1705 aaKnown RBP8.51□□□□□ -1.05
NCL-208ENST00000466274 USP47Q96K76 1375 aa8.5□□□□□ -1.05
NCL-208ENST00000466274 ABCC6O95255 1503 aa8.5□□□□□ -1.05
NCL-208ENST00000466274 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
NCL-208ENST00000466274 ATP4AP20648 1035 aa8.5□□□□□ -1.05
NCL-208ENST00000466274 ABHD8Q96I13 439 aa8.5□□□□□ -1.05
NCL-208ENST00000466274 SPOCK3Q9BQ16 436 aa8.5□□□□□ -1.05
NCL-208ENST00000466274 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
NCL-208ENST00000466274 GGA1Q9UJY5 639 aa8.5□□□□□ -1.05
NCL-208ENST00000466274 GDF2Q9UK05 429 aaPredicted RBP8.5□□□□□ -1.05
NCL-208ENST00000466274 COL24A1Q17RW2 1714 aa8.49□□□□□ -1.05
NCL-208ENST00000466274 FOXN1O15353 648 aa8.49□□□□□ -1.05
NCL-208ENST00000466274 RGS19P49795 217 aa8.49□□□□□ -1.05
NCL-208ENST00000466274 GOLGA6L1Q8N7Z2 621 aa8.49□□□□□ -1.05
NCL-208ENST00000466274 MPHOSPH9Q99550 1183 aa8.49□□□□□ -1.05
NCL-208ENST00000466274 USP3Q9Y6I4 520 aa8.49□□□□□ -1.05
NCL-208ENST00000466274 ANKRD36BQ8N2N9 1353 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 NSD3Q9BZ95 1437 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 CCDC85CA6NKD9 419 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 VEGFAP15692 232 aaPredicted RBP8.48□□□□□ -1.05
NCL-208ENST00000466274 SOX11P35716 441 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 ZNF295-AS1Q8N0V1 137 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 SLC4A9Q96Q91 983 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 HCN2Q9UL51 889 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 MKL2Q9ULH7 1088 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 COG6Q9Y2V7 657 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 PCDHGC4Q9Y5F7 938 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 PCDHGA11Q9Y5H2 935 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 PCNTO95613 3336 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 AKAP12Q02952 1782 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 ADGRB1O14514 1584 aa8.48□□□□□ -1.05
NCL-208ENST00000466274 TRPM1Q7Z4N2 1603 aa8.47□□□□□ -1.05
NCL-208ENST00000466274 QSER1Q2KHR3 1735 aa8.47□□□□□ -1.05
NCL-208ENST00000466274 A0A1W2PNR3 127 aa8.47□□□□□ -1.05
NCL-208ENST00000466274 CDK2AP1O14519 115 aa8.47□□□□□ -1.05
NCL-208ENST00000466274 AMPD1P23109 780 aa8.47□□□□□ -1.05
NCL-208ENST00000466274 ARSJQ5FYB0 599 aaPredicted RBP8.47□□□□□ -1.05
NCL-208ENST00000466274 FIGNL1Q6PIW4 674 aa8.47□□□□□ -1.05
NCL-208ENST00000466274 RNF181Q9P0P0 153 aa8.47□□□□□ -1.05
NCL-208ENST00000466274 IQSEC3Q9UPP2 1182 aaPredicted RBP8.47□□□□□ -1.05
NCL-208ENST00000466274 SLIT3O75094 1523 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms