RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 SLC5A1P13866 664 aa21.68■■□□□ 1.06
LETM1-202ENST00000466175 FGFR2P21802 821 aa21.68■■□□□ 1.06
LETM1-202ENST00000466175 NECAB1Q8N987 351 aa21.68■■□□□ 1.06
LETM1-202ENST00000466175 OSBP2Q969R2 916 aa21.68■■□□□ 1.06
LETM1-202ENST00000466175 MPHOSPH8Q99549 860 aa21.68■■□□□ 1.06
LETM1-202ENST00000466175 NIP7Q9Y221 180 aaKnown RBP eCLIP21.68■■□□□ 1.06
LETM1-202ENST00000466175 NTSR2O95665 410 aa21.67■■□□□ 1.06
LETM1-202ENST00000466175 CHGBP05060 677 aa21.67■■□□□ 1.06
LETM1-202ENST00000466175 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
LETM1-202ENST00000466175 WASHC4Q2M389 1173 aa21.67■■□□□ 1.06
LETM1-202ENST00000466175 LARP1BQ659C4 914 aaKnown RBP21.67■■□□□ 1.06
LETM1-202ENST00000466175 Q6ZUG5 572 aa21.67■■□□□ 1.06
LETM1-202ENST00000466175 GAS2L3Q86XJ1 694 aa21.67■■□□□ 1.06
LETM1-202ENST00000466175 FBXL16Q8N461 479 aa21.67■■□□□ 1.06
LETM1-202ENST00000466175 LLPHQ9BRT6 129 aaKnown RBP21.67■■□□□ 1.06
LETM1-202ENST00000466175 RTCBQ9Y3I0 505 aaKnown RBP21.67■■□□□ 1.06
LETM1-202ENST00000466175 LAMA4Q16363 1823 aa21.67■■□□□ 1.06
LETM1-202ENST00000466175 MCAMP43121 646 aa21.66■■□□□ 1.06
LETM1-202ENST00000466175 FGD1P98174 961 aa21.66■■□□□ 1.06
LETM1-202ENST00000466175 SCARF1Q14162 830 aa21.66■■□□□ 1.06
LETM1-202ENST00000466175 IMMTQ16891 758 aaKnown RBP21.66■■□□□ 1.06
LETM1-202ENST00000466175 RC3H1Q5TC82 1133 aaKnown RBP21.66■■□□□ 1.06
LETM1-202ENST00000466175 GTF3C6Q969F1 213 aa21.66■■□□□ 1.06
LETM1-202ENST00000466175 AGXT2Q9BYV1 514 aa21.66■■□□□ 1.06
LETM1-202ENST00000466175 IGHMBP2P38935 993 aaKnown RBP21.66■■□□□ 1.06
LETM1-202ENST00000466175 UBE3CQ15386 1083 aa21.66■■□□□ 1.06
LETM1-202ENST00000466175 MSL1Q68DK7 614 aa21.66■■□□□ 1.06
LETM1-202ENST00000466175 USP48Q86UV5 1035 aa21.66■■□□□ 1.06
LETM1-202ENST00000466175 E7EWF7 191 aa21.65■■□□□ 1.06
LETM1-202ENST00000466175 HCLS1P14317 486 aaPredicted RBP21.65■■□□□ 1.06
LETM1-202ENST00000466175 EXOSC10Q01780 885 aaKnown RBP21.65■■□□□ 1.06
LETM1-202ENST00000466175 CCDC102BQ68D86 513 aa21.65■■□□□ 1.06
LETM1-202ENST00000466175 RPS6KA4O75676 772 aa21.64■■□□□ 1.05
LETM1-202ENST00000466175 ADD2P35612 726 aa21.64■■□□□ 1.05
LETM1-202ENST00000466175 STOX1Q6ZVD7 989 aa21.64■■□□□ 1.05
LETM1-202ENST00000466175 TCEANC2Q96MN5 208 aa21.64■■□□□ 1.05
LETM1-202ENST00000466175 SPON1Q9HCB6 807 aa21.64■■□□□ 1.05
LETM1-202ENST00000466175 KIF3AQ9Y496 699 aa21.64■■□□□ 1.05
LETM1-202ENST00000466175 PFKFB2O60825 505 aa21.63■■□□□ 1.05
LETM1-202ENST00000466175 CDC5LQ99459 802 aaKnown RBP21.63■■□□□ 1.05
LETM1-202ENST00000466175 UBE2HP62256 183 aa21.62■■□□□ 1.05
LETM1-202ENST00000466175 TRAPPC3LQ5T215 181 aa21.62■■□□□ 1.05
LETM1-202ENST00000466175 FLAD1Q8NFF5 587 aa21.62■■□□□ 1.05
LETM1-202ENST00000466175 ANP32BQ92688 251 aaKnown RBP21.62■■□□□ 1.05
LETM1-202ENST00000466175 ARHGEF1Q92888 912 aaKnown RBP21.62■■□□□ 1.05
LETM1-202ENST00000466175 MTFR1LQ9H019 292 aa21.62■■□□□ 1.05
LETM1-202ENST00000466175 C4AP0C0L4 1744 aa21.62■■□□□ 1.05
LETM1-202ENST00000466175 VPS37CA5D8V6 355 aaPredicted RBP21.62■■□□□ 1.05
LETM1-202ENST00000466175 LETM1O95202 739 aaPredicted RBP21.62■■□□□ 1.05
LETM1-202ENST00000466175 SLFNL1Q499Z3 407 aa21.62■■□□□ 1.05
LETM1-202ENST00000466175 LRSAM1Q6UWE0 723 aa21.62■■□□□ 1.05
LETM1-202ENST00000466175 ZNF274Q96GC6 653 aaPredicted RBP21.62■■□□□ 1.05
LETM1-202ENST00000466175 TMEM63CQ9P1W3 806 aa21.62■■□□□ 1.05
LETM1-202ENST00000466175 WDR19Q8NEZ3 1342 aa21.62■■□□□ 1.05
LETM1-202ENST00000466175 GPAA1O43292 621 aa21.61■■□□□ 1.05
LETM1-202ENST00000466175 HMGN5P82970 282 aaKnown RBP21.61■■□□□ 1.05
LETM1-202ENST00000466175 SCN7AQ01118 1682 aa21.61■■□□□ 1.05
LETM1-202ENST00000466175 COL9A3Q14050 684 aaPredicted RBP21.61■■□□□ 1.05
LETM1-202ENST00000466175 BRF1Q92994 677 aa21.61■■□□□ 1.05
LETM1-202ENST00000466175 CHAMP1Q96JM3 812 aa21.61■■□□□ 1.05
LETM1-202ENST00000466175 PHKA1P46020 1223 aa21.6■■□□□ 1.05
LETM1-202ENST00000466175 SLC9C2Q5TAH2 1124 aa21.6■■□□□ 1.05
LETM1-202ENST00000466175 CNPY2Q9Y2B0 182 aa21.6■■□□□ 1.05
LETM1-202ENST00000466175 TCHHQ07283 1943 aa21.6■■□□□ 1.05
LETM1-202ENST00000466175 RFC4P35249 363 aa21.59■■□□□ 1.05
LETM1-202ENST00000466175 SPATA5Q8NB90 893 aa21.59■■□□□ 1.05
LETM1-202ENST00000466175 PUS7LQ9H0K6 701 aaKnown RBP21.59■■□□□ 1.05
LETM1-202ENST00000466175 SRP68Q9UHB9 627 aaKnown RBP21.59■■□□□ 1.05
LETM1-202ENST00000466175 DOCK2Q92608 1830 aa21.59■■□□□ 1.05
LETM1-202ENST00000466175 FGAP02671 866 aa21.58■■□□□ 1.05
LETM1-202ENST00000466175 PTGER2P43116 358 aa21.58■■□□□ 1.05
LETM1-202ENST00000466175 NASPP49321 788 aaPredicted RBP21.58■■□□□ 1.05
LETM1-202ENST00000466175 EVCP57679 992 aa21.58■■□□□ 1.05
LETM1-202ENST00000466175 KRT85P78386 507 aa21.58■■□□□ 1.05
LETM1-202ENST00000466175 STK3Q13188 491 aa21.58■■□□□ 1.05
LETM1-202ENST00000466175 SF3B3Q15393 1217 aaKnown RBP21.58■■□□□ 1.05
LETM1-202ENST00000466175 PI16Q6UXB8 463 aa21.58■■□□□ 1.05
LETM1-202ENST00000466175 SMARCC2Q8TAQ2 1214 aa21.58■■□□□ 1.05
LETM1-202ENST00000466175 SLC16A10Q8TF71 515 aa21.58■■□□□ 1.05
LETM1-202ENST00000466175 PANK2Q9BZ23 570 aa21.58■■□□□ 1.05
LETM1-202ENST00000466175 RBM27Q9P2N5 1060 aaKnown RBP21.58■■□□□ 1.05
LETM1-202ENST00000466175 ZMYM6O95789 1325 aa21.58■■□□□ 1.04
LETM1-202ENST00000466175 FAM177BA6PVY3 158 aa21.58■■□□□ 1.04
LETM1-202ENST00000466175 ZNF213O14771 459 aa21.58■■□□□ 1.04
LETM1-202ENST00000466175 MAP3K12Q12852 859 aa21.58■■□□□ 1.04
LETM1-202ENST00000466175 SLC10A5Q5PT55 438 aa21.58■■□□□ 1.04
LETM1-202ENST00000466175 NYXQ9GZU5 481 aa21.58■■□□□ 1.04
LETM1-202ENST00000466175 PIH1D3Q9NQM4 214 aaKnown RBP21.58■■□□□ 1.04
LETM1-202ENST00000466175 SEC31BQ9NQW1 1179 aa21.58■■□□□ 1.04
LETM1-202ENST00000466175 ELP1O95163 1332 aa21.57■■□□□ 1.04
LETM1-202ENST00000466175 FOXP2O15409 715 aa21.57■■□□□ 1.04
LETM1-202ENST00000466175 ADRA2BP18089 450 aa21.57■■□□□ 1.04
LETM1-202ENST00000466175 MCM5P33992 734 aa21.57■■□□□ 1.04
LETM1-202ENST00000466175 FOXD4L6Q3SYB3 417 aaPredicted RBP21.57■■□□□ 1.04
LETM1-202ENST00000466175 FOXD4L3Q6VB84 417 aaPredicted RBP21.57■■□□□ 1.04
LETM1-202ENST00000466175 FAM43AQ8N2R8 423 aa21.57■■□□□ 1.04
LETM1-202ENST00000466175 NCOA7Q8NI08 942 aa21.57■■□□□ 1.04
LETM1-202ENST00000466175 NSFL1CQ9UNZ2 370 aaKnown RBP21.57■■□□□ 1.04
LETM1-202ENST00000466175 IDH1O75874 414 aaKnown RBP21.56■■□□□ 1.04
LETM1-202ENST00000466175 PDE6AP16499 860 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms