RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 IREB2P48200 963 aaKnown RBP10.91□□□□□ -0.66
DDR1-242ENST00000465966 WNK4Q96J92 1243 aa10.91□□□□□ -0.66
DDR1-242ENST00000465966 EFCC1Q9HA90 598 aa10.91□□□□□ -0.66
DDR1-242ENST00000465966 COL1A1P02452 1464 aaPredicted RBP10.91□□□□□ -0.66
DDR1-242ENST00000465966 SCN9AQ15858 1988 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 FANCIQ9NVI1 1328 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 PI4KAP2A4QPH2 592 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 IGF2BP3O00425 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
DDR1-242ENST00000465966 SP3Q02447 781 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 NBPF11Q86T75 865 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 TXNRD3Q86VQ6 643 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 PI4KAP1Q8N8J0 262 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 CD99L2Q8TCZ2 262 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 ARMC5Q96C12 935 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 ZBED3Q96IU2 234 aaPredicted RBP10.9□□□□□ -0.66
DDR1-242ENST00000465966 STK31Q9BXU1 1019 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 FZD1Q9UP38 647 aa10.9□□□□□ -0.66
DDR1-242ENST00000465966 POLR2AP24928 1970 aaKnown RBP10.9□□□□□ -0.66
DDR1-242ENST00000465966 IGKV5-2P06315 115 aa10.89□□□□□ -0.67
DDR1-242ENST00000465966 EN2P19622 333 aaPredicted RBP10.89□□□□□ -0.67
DDR1-242ENST00000465966 ITGA6P23229 1130 aa10.89□□□□□ -0.67
DDR1-242ENST00000465966 CRHR2Q13324 411 aa10.89□□□□□ -0.67
DDR1-242ENST00000465966 ANKRD13AQ8IZ07 590 aa10.89□□□□□ -0.67
DDR1-242ENST00000465966 MTMR14Q8NCE2 650 aa10.89□□□□□ -0.67
DDR1-242ENST00000465966 CLMNQ96JQ2 1002 aa10.89□□□□□ -0.67
DDR1-242ENST00000465966 CD209Q9NNX6 404 aa10.89□□□□□ -0.67
DDR1-242ENST00000465966 RCAN3Q9UKA8 241 aa10.89□□□□□ -0.67
DDR1-242ENST00000465966 RBM5P52756 815 aaKnown RBP eCLIP10.88□□□□□ -0.67
DDR1-242ENST00000465966 CFAP100Q494V2 611 aa10.88□□□□□ -0.67
DDR1-242ENST00000465966 UBE3BQ7Z3V4 1068 aa10.88□□□□□ -0.67
DDR1-242ENST00000465966 C8orf58Q8NAV2 365 aa10.88□□□□□ -0.67
DDR1-242ENST00000465966 TSR2Q969E8 191 aaKnown RBP10.88□□□□□ -0.67
DDR1-242ENST00000465966 VEZTQ9HBM0 779 aa10.88□□□□□ -0.67
DDR1-242ENST00000465966 CLRN2A0PK11 232 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 SPDYE2BA6NHP3 402 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 NEURL1BA8MQ27 555 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 F8W031 263 aaPredicted RBP10.87□□□□□ -0.67
DDR1-242ENST00000465966 H7C1W4 665 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 WDHD1O75717 1129 aaPredicted RBP10.87□□□□□ -0.67
DDR1-242ENST00000465966 SPDYE6P0CI01 402 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 KLRK1P26718 216 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 CHRNDQ07001 517 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 TNFAIP1Q13829 316 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 CWF19L2Q2TBE0 894 aaKnown RBP10.87□□□□□ -0.67
DDR1-242ENST00000465966 SLC4A8Q2Y0W8 1093 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 SLC9C1Q4G0N8 1177 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 ZNF804AQ7Z570 1209 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 PLA2G12BQ9BX93 195 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 MYH16Q9H6N6 1097 aa10.87□□□□□ -0.67
DDR1-242ENST00000465966 ANKRD18BA2A2Z9 1011 aa10.86□□□□□ -0.67
DDR1-242ENST00000465966 TESPA1A2RU30 521 aaPredicted RBP10.86□□□□□ -0.67
DDR1-242ENST00000465966 USP2O75604 605 aaPredicted RBP10.86□□□□□ -0.67
DDR1-242ENST00000465966 NEFLP07196 543 aa10.86□□□□□ -0.67
DDR1-242ENST00000465966 FXR1P51114 621 aaKnown RBP eCLIP10.86□□□□□ -0.67
DDR1-242ENST00000465966 RRP1P56182 461 aaKnown RBP10.86□□□□□ -0.67
DDR1-242ENST00000465966 FKBP1AP62942 108 aaKnown RBP10.86□□□□□ -0.67
DDR1-242ENST00000465966 IRX6P78412 446 aaPredicted RBP10.86□□□□□ -0.67
DDR1-242ENST00000465966 NBPF12Q5TAG4 269 aaPredicted RBP10.86□□□□□ -0.67
DDR1-242ENST00000465966 PRMT6Q96LA8 375 aaPredicted RBP10.86□□□□□ -0.67
DDR1-242ENST00000465966 ZFYVE28Q9HCC9 887 aa10.86□□□□□ -0.67
DDR1-242ENST00000465966 CSF1RP07333 972 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 IL1R1P14778 569 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 GTF2A2P52657 109 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 GCKRQ14397 625 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 RASA3Q14644 834 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 KIF22Q14807 665 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 C15orf52Q6ZUT6 534 aaKnown RBP10.85□□□□□ -0.67
DDR1-242ENST00000465966 CERS5Q8N5B7 392 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 OPTNQ96CV9 577 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 ZNF333Q96JL9 665 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 PTPN18Q99952 460 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 ELP3Q9H9T3 547 aa10.85□□□□□ -0.67
DDR1-242ENST00000465966 TAF5LO75529 589 aa10.84□□□□□ -0.67
DDR1-242ENST00000465966 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
DDR1-242ENST00000465966 GJA5P36382 358 aa10.84□□□□□ -0.67
DDR1-242ENST00000465966 EXOSC9Q06265 439 aaKnown RBP10.84□□□□□ -0.67
DDR1-242ENST00000465966 IFIT5Q13325 482 aaKnown RBP10.84□□□□□ -0.67
DDR1-242ENST00000465966 TAF1CQ15572 869 aaPredicted RBP10.84□□□□□ -0.67
DDR1-242ENST00000465966 TSPYL6Q8N831 410 aa10.84□□□□□ -0.67
DDR1-242ENST00000465966 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
DDR1-242ENST00000465966 CCL15-CCL14A0A0B4J2E2 113 aa10.83□□□□□ -0.68
DDR1-242ENST00000465966 TNNI2P48788 182 aa10.83□□□□□ -0.68
DDR1-242ENST00000465966 CCL15Q16663 113 aa10.83□□□□□ -0.68
DDR1-242ENST00000465966 MS4A4AQ96JQ5 239 aa10.83□□□□□ -0.68
DDR1-242ENST00000465966 CHMP3Q9Y3E7 222 aa10.83□□□□□ -0.68
DDR1-242ENST00000465966 PCDHAC2Q9Y5I4 1007 aa10.83□□□□□ -0.68
DDR1-242ENST00000465966 CSADQ9Y600 493 aa10.83□□□□□ -0.68
DDR1-242ENST00000465966 PTCH2Q9Y6C5 1203 aa10.83□□□□□ -0.68
DDR1-242ENST00000465966 PSME4Q14997 1843 aa10.83□□□□□ -0.68
DDR1-242ENST00000465966 SSC5DA1L4H1 1573 aa10.82□□□□□ -0.68
DDR1-242ENST00000465966 GNRH1P01148 92 aa10.82□□□□□ -0.68
DDR1-242ENST00000465966 MAP3K9P80192 1104 aa10.82□□□□□ -0.68
DDR1-242ENST00000465966 TWISTNBQ3B726 338 aaPredicted RBP10.82□□□□□ -0.68
DDR1-242ENST00000465966 TAF7LQ5H9L4 462 aa10.82□□□□□ -0.68
DDR1-242ENST00000465966 HELBQ8NG08 1087 aaPredicted RBP10.82□□□□□ -0.68
DDR1-242ENST00000465966 LINS1Q8NG48 757 aa10.82□□□□□ -0.68
DDR1-242ENST00000465966 ZNF70Q9UC06 446 aaPredicted RBP10.82□□□□□ -0.68
DDR1-242ENST00000465966 SERPINA10Q9UK55 444 aa10.82□□□□□ -0.68
DDR1-242ENST00000465966 SNAP23O00161 211 aa10.81□□□□□ -0.68
DDR1-242ENST00000465966 MYCP01106 439 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms