RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 SWAP70Q9UH65 585 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 CDC42BPGQ6DT37 1551 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 ABCC3O15438 1527 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 GOLGA8AA7E2F4 631 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 GOLGA8BA8MQT2 603 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 GTF2IP78347 998 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 MFSD14BQ5SR56 506 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 IFIT1BQ5T764 474 aaKnown RBP10.9□□□□□ -0.66
SCAF11-205ENST00000465950 SASS6Q6UVJ0 657 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 KRT26Q7Z3Y9 468 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 STK11IPQ8N1F8 1099 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 HOMER2Q9NSB8 354 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 STX6O43752 255 aa10.9□□□□□ -0.67
SCAF11-205ENST00000465950 PODNQ7Z5L7 613 aa10.9□□□□□ -0.67
SCAF11-205ENST00000465950 HTATIP2Q9BUP3 242 aa10.9□□□□□ -0.67
SCAF11-205ENST00000465950 LNPKQ9C0E8 428 aa10.9□□□□□ -0.67
SCAF11-205ENST00000465950 KBTBD13C9JR72 458 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 ACTN1P12814 892 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 SDF4Q9BRK5 362 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 PREX2Q70Z35 1606 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 TMOD1P28289 359 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 SKIV2LQ15477 1246 aaKnown RBP10.89□□□□□ -0.67
SCAF11-205ENST00000465950 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 PARK7Q99497 189 aaKnown RBP10.89□□□□□ -0.67
SCAF11-205ENST00000465950 WTAPQ15007 396 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 STYK1Q6J9G0 422 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
SCAF11-205ENST00000465950 KINO60870 393 aaKnown RBP10.89□□□□□ -0.67
SCAF11-205ENST00000465950 VPS36Q86VN1 386 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 ERO1AQ96HE7 468 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 TRIM6Q9C030 488 aaPredicted RBP10.89□□□□□ -0.67
SCAF11-205ENST00000465950 SSX2IPQ9Y2D8 614 aa10.89□□□□□ -0.67
SCAF11-205ENST00000465950 ERCC6L2Q5T890 1561 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 ASXL1Q8IXJ9 1541 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 FDX1P10109 184 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 GRAPQ13588 217 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 TMEM67Q5HYA8 995 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 GRAPLQ8TC17 118 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-205ENST00000465950 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 RBM19Q9Y4C8 960 aaKnown RBP10.88□□□□□ -0.67
SCAF11-205ENST00000465950 A0A1W2PP64 1363 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 PCCAP05165 728 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-205ENST00000465950 CCDC172P0C7W6 258 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 MX1P20591 662 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 ZNF157P51786 506 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-205ENST00000465950 SYNE4Q8N205 404 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 CCDC97Q96F63 343 aaPredicted RBP10.88□□□□□ -0.67
SCAF11-205ENST00000465950 SPATA31A5Q5VU36 1347 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 SPATA31A7Q8IWB4 1347 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 EYA2O00167 538 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 CA12O43570 354 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 DDX11L8A8MPP1 907 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 PARP1P09874 1014 aaKnown RBP10.88□□□□□ -0.67
SCAF11-205ENST00000465950 RABEP1Q15276 862 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 CCDC129Q6ZRS4 1044 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 MRPL11Q9Y3B7 192 aaKnown RBP10.88□□□□□ -0.67
SCAF11-205ENST00000465950 ERBB3P21860 1342 aa10.88□□□□□ -0.67
SCAF11-205ENST00000465950 CFAP45Q9UL16 551 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 FAM50BQ9Y247 325 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 SPATA31A1Q5TZJ5 1347 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 ADGRB3O60242 1522 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 GOLIM4O00461 696 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 RARSP54136 660 aaKnown RBP10.87□□□□□ -0.67
SCAF11-205ENST00000465950 DCTN1Q14203 1278 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 GCKRQ14397 625 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 USP6P35125 1406 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 RIMS1Q86UR5 1692 aaKnown RBP10.87□□□□□ -0.67
SCAF11-205ENST00000465950 MAP2K1Q02750 393 aaPredicted RBP10.87□□□□□ -0.67
SCAF11-205ENST00000465950 PDE4DQ08499 809 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 SYCP3Q8IZU3 236 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 PLCD3Q8N3E9 789 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 NBPF15Q8N660 670 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 GOLGA1Q92805 767 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 VPS33BQ9H267 617 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 DIP2BQ9P265 1576 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 KAT6BQ8WYB5 2073 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 XPOTO43592 962 aaKnown RBP10.87□□□□□ -0.67
SCAF11-205ENST00000465950 NAP1L1P55209 391 aaKnown RBP10.87□□□□□ -0.67
SCAF11-205ENST00000465950 PPP2R5BQ15173 497 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 CDHR1Q96JP9 859 aa10.87□□□□□ -0.67
SCAF11-205ENST00000465950 H0YCG3 227 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 LETM1O95202 739 aaPredicted RBP10.86□□□□□ -0.67
SCAF11-205ENST00000465950 HCLS1P14317 486 aaPredicted RBP10.86□□□□□ -0.67
SCAF11-205ENST00000465950 FAM160B1Q5W0V3 765 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 ANKRD35Q8N283 1001 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 IFT74Q96LB3 600 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 BOLA2Q9H3K6 86 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 ANGEL1Q9UNK9 670 aaKnown RBP10.86□□□□□ -0.67
SCAF11-205ENST00000465950 C1orf167Q5SNV9 1468 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 SMC1AQ14683 1233 aaKnown RBP10.86□□□□□ -0.67
SCAF11-205ENST00000465950 FMNL3Q8IVF7 1028 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 SHROOM2Q13796 1616 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 ZBTB38Q8NAP3 1195 aaPredicted RBP10.86□□□□□ -0.67
SCAF11-205ENST00000465950 ATP10DQ9P241 1426 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 SETD1BQ9UPS6 1966 aaKnown RBP10.86□□□□□ -0.67
SCAF11-205ENST00000465950 SLC9C2Q5TAH2 1124 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 NCAPG2Q86XI2 1143 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 ZNRF3Q9ULT6 936 aa10.86□□□□□ -0.67
SCAF11-205ENST00000465950 MYOM2P54296 1465 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms