RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 FOXD3Q9UJU5 478 aaPredicted RBP5.83□□□□□ -1.48
SNX4-202ENST00000465505 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 TGFB1P01137 390 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 ARL4DP49703 201 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 C19orf57Q0VDD7 668 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 PEAR1Q5VY43 1037 aaPredicted RBP5.82□□□□□ -1.48
SNX4-202ENST00000465505 ANKRD34AQ69YU3 496 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 FAM20CQ8IXL6 584 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 SNX29Q8TEQ0 813 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 FAM83CQ9BQN1 747 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 RUSC1Q9BVN2 902 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 MTMR7Q9Y216 660 aa5.82□□□□□ -1.48
SNX4-202ENST00000465505 SART1O43290 800 aaKnown RBP5.81□□□□□ -1.48
SNX4-202ENST00000465505 BMP3P12645 472 aa5.81□□□□□ -1.48
SNX4-202ENST00000465505 PREPP48147 710 aa5.81□□□□□ -1.48
SNX4-202ENST00000465505 IKBKEQ14164 716 aa5.81□□□□□ -1.48
SNX4-202ENST00000465505 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.81□□□□□ -1.48
SNX4-202ENST00000465505 GJD3Q8N144 294 aa5.81□□□□□ -1.48
SNX4-202ENST00000465505 BHLHE41Q9C0J9 482 aaPredicted RBP5.81□□□□□ -1.48
SNX4-202ENST00000465505 ZFYVE28Q9HCC9 887 aa5.81□□□□□ -1.48
SNX4-202ENST00000465505 ANO2Q9NQ90 1003 aa5.81□□□□□ -1.48
SNX4-202ENST00000465505 LATS2Q9NRM7 1088 aa5.81□□□□□ -1.48
SNX4-202ENST00000465505 PRR19A6NJB7 356 aa5.8□□□□□ -1.48
SNX4-202ENST00000465505 COBLO75128 1261 aa5.8□□□□□ -1.48
SNX4-202ENST00000465505 ABL1P00519 1130 aa5.8□□□□□ -1.48
SNX4-202ENST00000465505 AMOTL2Q9Y2J4 779 aa5.8□□□□□ -1.48
SNX4-202ENST00000465505 KIAA1324LA8MWY0 1029 aaPredicted RBP5.79□□□□□ -1.48
SNX4-202ENST00000465505 DLGAP3O95886 979 aa5.79□□□□□ -1.48
SNX4-202ENST00000465505 ESRRAP11474 423 aaPredicted RBP5.79□□□□□ -1.48
SNX4-202ENST00000465505 ZNF211Q13398 564 aaPredicted RBP5.79□□□□□ -1.48
SNX4-202ENST00000465505 ECM1Q16610 540 aa5.79□□□□□ -1.48
SNX4-202ENST00000465505 BEND4Q6ZU67 534 aa5.79□□□□□ -1.48
SNX4-202ENST00000465505 ASAP3Q8TDY4 903 aa5.79□□□□□ -1.48
SNX4-202ENST00000465505 DBNDD2Q9BQY9 259 aa5.79□□□□□ -1.48
SNX4-202ENST00000465505 TMPRSS13Q9BYE2 586 aa5.79□□□□□ -1.48
SNX4-202ENST00000465505 KCNF1Q9H3M0 494 aa5.79□□□□□ -1.48
SNX4-202ENST00000465505 SOX17Q9H6I2 414 aaPredicted RBP5.79□□□□□ -1.48
SNX4-202ENST00000465505 HIF3AQ9Y2N7 669 aa5.79□□□□□ -1.48
SNX4-202ENST00000465505 LOC100289279A0A1B0GTE1 492 aa5.78□□□□□ -1.48
SNX4-202ENST00000465505 METTL12A8MUP2 240 aa5.78□□□□□ -1.48
SNX4-202ENST00000465505 ICMTO60725 284 aa5.78□□□□□ -1.48
SNX4-202ENST00000465505 POLR3DP05423 398 aaPredicted RBP5.78□□□□□ -1.48
SNX4-202ENST00000465505 NUTM2GQ5VZR2 741 aa5.78□□□□□ -1.48
SNX4-202ENST00000465505 FDX2Q6P4F2 183 aa5.78□□□□□ -1.48
SNX4-202ENST00000465505 SMG8Q8ND04 991 aaKnown RBP5.78□□□□□ -1.48
SNX4-202ENST00000465505 SUGCTQ9HAC7 445 aa5.78□□□□□ -1.48
SNX4-202ENST00000465505 TIAF1O95411 115 aa5.77□□□□□ -1.49
SNX4-202ENST00000465505 EXOSC6Q5RKV6 272 aaKnown RBP5.77□□□□□ -1.49
SNX4-202ENST00000465505 INTS5Q6P9B9 1019 aaKnown RBP5.77□□□□□ -1.49
SNX4-202ENST00000465505 C12orf50Q8NA57 414 aaPredicted RBP5.77□□□□□ -1.49
SNX4-202ENST00000465505 SHKBP1Q8TBC3 707 aa5.77□□□□□ -1.49
SNX4-202ENST00000465505 EGFL7Q9UHF1 273 aa5.77□□□□□ -1.49
SNX4-202ENST00000465505 A0A096LPE4 126 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 A0A1W2PPZ6 126 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 ADAMTS4O75173 837 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 SPINK2P20155 84 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 MAP4P27816 1152 aaKnown RBP5.76□□□□□ -1.49
SNX4-202ENST00000465505 ZNF423Q2M1K9 1284 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 SGO2Q562F6 1265 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 CCNJLQ8IV13 435 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 GALNT12Q8IXK2 581 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 TCF12Q99081 682 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 USP26Q9BXU7 913 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 NRSN2Q9GZP1 204 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 CYP4F12Q9HCS2 524 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 USTQ9Y2C2 406 aa5.76□□□□□ -1.49
SNX4-202ENST00000465505 COL17A1Q9UMD9 1497 aaPredicted RBP5.76□□□□□ -1.49
SNX4-202ENST00000465505 A0A1W2PP55 124 aa5.75□□□□□ -1.49
SNX4-202ENST00000465505 DRD2P14416 443 aa5.75□□□□□ -1.49
SNX4-202ENST00000465505 GRIK1P39086 918 aa5.75□□□□□ -1.49
SNX4-202ENST00000465505 GSTM4Q03013 218 aa5.75□□□□□ -1.49
SNX4-202ENST00000465505 MCTP1Q6DN14 999 aa5.75□□□□□ -1.49
SNX4-202ENST00000465505 DTX1Q86Y01 620 aa5.75□□□□□ -1.49
SNX4-202ENST00000465505 KRTAP4-12Q9BQ66 201 aa5.75□□□□□ -1.49
SNX4-202ENST00000465505 WDR64B1ANS9 1081 aa5.74□□□□□ -1.49
SNX4-202ENST00000465505 GAS2O43903 313 aaKnown RBP5.74□□□□□ -1.49
SNX4-202ENST00000465505 GRIA4P48058 902 aa5.74□□□□□ -1.49
SNX4-202ENST00000465505 SERPINB4P48594 390 aa5.74□□□□□ -1.49
SNX4-202ENST00000465505 GP2P55259 537 aaKnown RBP5.74□□□□□ -1.49
SNX4-202ENST00000465505 ARHGAP4P98171 946 aa5.74□□□□□ -1.49
SNX4-202ENST00000465505 SPRED3Q2MJR0 410 aa5.74□□□□□ -1.49
SNX4-202ENST00000465505 C14orf37Q86TY3 774 aa5.74□□□□□ -1.49
SNX4-202ENST00000465505 MFSD14AQ96MC6 490 aa5.74□□□□□ -1.49
SNX4-202ENST00000465505 CLEC4MQ9H2X3 399 aaPredicted RBP5.74□□□□□ -1.49
SNX4-202ENST00000465505 BRPF3Q9ULD4 1205 aa5.74□□□□□ -1.49
SNX4-202ENST00000465505 OAS3Q9Y6K5 1087 aaKnown RBP5.74□□□□□ -1.49
SNX4-202ENST00000465505 EIF4EBP3O60516 100 aaPredicted RBP5.73□□□□□ -1.49
SNX4-202ENST00000465505 HOXA10P31260 410 aaPredicted RBP5.73□□□□□ -1.49
SNX4-202ENST00000465505 SOX4Q06945 474 aaPredicted RBP5.73□□□□□ -1.49
SNX4-202ENST00000465505 PCDH1Q08174 1060 aa5.73□□□□□ -1.49
SNX4-202ENST00000465505 KIAA0319Q5VV43 1072 aa5.73□□□□□ -1.49
SNX4-202ENST00000465505 USPL1Q5W0Q7 1092 aa5.73□□□□□ -1.49
SNX4-202ENST00000465505 CDPF1Q6NVV7 123 aa5.73□□□□□ -1.49
SNX4-202ENST00000465505 LIN7BQ9HAP6 207 aa5.73□□□□□ -1.49
SNX4-202ENST00000465505 FAM95CA0A1B0GW59 222 aa5.72□□□□□ -1.49
SNX4-202ENST00000465505 H3BRB1 525 aa5.72□□□□□ -1.49
SNX4-202ENST00000465505 F13BP05160 661 aa5.72□□□□□ -1.49
SNX4-202ENST00000465505 RXRBP28702 533 aa5.72□□□□□ -1.49
SNX4-202ENST00000465505 B4GALNT3Q6L9W6 998 aa5.72□□□□□ -1.49
SNX4-202ENST00000465505 GLYCTKQ8IVS8 523 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms