RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 SPATA5Q8NB90 893 aa16.29■□□□□ 0.2
ATF3-208ENST00000465155 PAG1Q9NWQ8 432 aa16.29■□□□□ 0.2
ATF3-208ENST00000465155 SRCAPQ6ZRS2 3230 aa16.28■□□□□ 0.2
ATF3-208ENST00000465155 GOLIM4O00461 696 aa16.28■□□□□ 0.2
ATF3-208ENST00000465155 AOC3Q16853 763 aa16.28■□□□□ 0.2
ATF3-208ENST00000465155 EVI5LQ96CN4 794 aa16.28■□□□□ 0.2
ATF3-208ENST00000465155 CD209Q9NNX6 404 aa16.28■□□□□ 0.2
ATF3-208ENST00000465155 COL1A1P02452 1464 aaPredicted RBP16.28■□□□□ 0.2
ATF3-208ENST00000465155 G3V3G9 751 aa16.27■□□□□ 0.2
ATF3-208ENST00000465155 SEMA3EO15041 775 aa16.27■□□□□ 0.2
ATF3-208ENST00000465155 DCAF8Q5TAQ9 597 aa16.27■□□□□ 0.2
ATF3-208ENST00000465155 COA1Q9GZY4 146 aa16.27■□□□□ 0.2
ATF3-208ENST00000465155 ANTXR1Q9H6X2 564 aa16.27■□□□□ 0.2
ATF3-208ENST00000465155 DENND2AQ9ULE3 1009 aa16.27■□□□□ 0.2
ATF3-208ENST00000465155 MYO5AQ9Y4I1 1855 aaKnown RBP16.27■□□□□ 0.2
ATF3-208ENST00000465155 CHD4Q14839 1912 aa16.27■□□□□ 0.19
ATF3-208ENST00000465155 PPIP5K2O43314 1243 aa16.27■□□□□ 0.19
ATF3-208ENST00000465155 IL1R1P14778 569 aa16.27■□□□□ 0.19
ATF3-208ENST00000465155 DOK7Q18PE1 504 aa16.27■□□□□ 0.19
ATF3-208ENST00000465155 TDRD7Q8NHU6 1098 aaKnown RBP16.27■□□□□ 0.19
ATF3-208ENST00000465155 NFKBIEO00221 500 aa16.26■□□□□ 0.19
ATF3-208ENST00000465155 CYP2E1P05181 493 aaPredicted RBP16.26■□□□□ 0.19
ATF3-208ENST00000465155 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
ATF3-208ENST00000465155 FSD1Q9BTV5 496 aa16.26■□□□□ 0.19
ATF3-208ENST00000465155 TAOK3Q9H2K8 898 aa16.26■□□□□ 0.19
ATF3-208ENST00000465155 ZNF277Q9NRM2 450 aaPredicted RBP16.26■□□□□ 0.19
ATF3-208ENST00000465155 DOCK2Q92608 1830 aa16.25■□□□□ 0.19
ATF3-208ENST00000465155 MYH7P12883 1935 aa16.25■□□□□ 0.19
ATF3-208ENST00000465155 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
ATF3-208ENST00000465155 DBNDD1Q9H9R9 158 aa16.25■□□□□ 0.19
ATF3-208ENST00000465155 CDC45O75419 566 aa16.24■□□□□ 0.19
ATF3-208ENST00000465155 TTF1Q15361 905 aaPredicted RBP16.24■□□□□ 0.19
ATF3-208ENST00000465155 TBC1D9Q6ZT07 1266 aa16.24■□□□□ 0.19
ATF3-208ENST00000465155 KBTBD3Q8NAB2 608 aa16.24■□□□□ 0.19
ATF3-208ENST00000465155 VPS33BQ9H267 617 aa16.24■□□□□ 0.19
ATF3-208ENST00000465155 JAG2Q9Y219 1238 aa16.24■□□□□ 0.19
ATF3-208ENST00000465155 PDS5AQ29RF7 1337 aaKnown RBP16.24■□□□□ 0.19
ATF3-208ENST00000465155 CCDC88AQ3V6T2 1871 aa16.24■□□□□ 0.19
ATF3-208ENST00000465155 ECE2O60344 883 aa16.23■□□□□ 0.19
ATF3-208ENST00000465155 CAPN15O75808 1086 aa16.23■□□□□ 0.19
ATF3-208ENST00000465155 LARGE2Q8N3Y3 721 aa16.23■□□□□ 0.19
ATF3-208ENST00000465155 PIH1D3Q9NQM4 214 aaKnown RBP16.23■□□□□ 0.19
ATF3-208ENST00000465155 IARSP41252 1262 aaKnown RBP16.23■□□□□ 0.19
ATF3-208ENST00000465155 RASSF7Q02833 373 aa16.23■□□□□ 0.19
ATF3-208ENST00000465155 C8orf34Q49A92 452 aa16.23■□□□□ 0.19
ATF3-208ENST00000465155 ARHGAP27Q6ZUM4 889 aa16.23■□□□□ 0.19
ATF3-208ENST00000465155 PODNQ7Z5L7 613 aa16.23■□□□□ 0.19
ATF3-208ENST00000465155 ABCF2Q9UG63 623 aa16.23■□□□□ 0.19
ATF3-208ENST00000465155 LTBP3Q9NS15 1303 aa16.23■□□□□ 0.19
ATF3-208ENST00000465155 COL4A5P29400 1685 aa16.22■□□□□ 0.19
ATF3-208ENST00000465155 SCN9AQ15858 1988 aa16.22■□□□□ 0.19
ATF3-208ENST00000465155 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.19
ATF3-208ENST00000465155 IDH1O75874 414 aaKnown RBP16.21■□□□□ 0.19
ATF3-208ENST00000465155 CHMLP26374 656 aa16.21■□□□□ 0.19
ATF3-208ENST00000465155 GTF2IP78347 998 aa16.21■□□□□ 0.19
ATF3-208ENST00000465155 CASC1Q6TDU7 716 aa16.21■□□□□ 0.19
ATF3-208ENST00000465155 WDR66Q8TBY9 1149 aa16.21■□□□□ 0.19
ATF3-208ENST00000465155 FBXW7Q969H0 707 aa16.21■□□□□ 0.19
ATF3-208ENST00000465155 LRP2BPQ9P2M1 347 aa16.21■□□□□ 0.19
ATF3-208ENST00000465155 RFX7Q2KHR2 1363 aa16.2■□□□□ 0.18
ATF3-208ENST00000465155 FAM205AQ6ZU69 1335 aa16.2■□□□□ 0.18
ATF3-208ENST00000465155 NIM1KQ8IY84 436 aa16.2■□□□□ 0.18
ATF3-208ENST00000465155 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.2■□□□□ 0.18
ATF3-208ENST00000465155 KCNQ5Q9NR82 932 aa16.2■□□□□ 0.18
ATF3-208ENST00000465155 DIAPH3Q9NSV4 1193 aa16.2■□□□□ 0.18
ATF3-208ENST00000465155 ZNF646O15015 1829 aaPredicted RBP16.2■□□□□ 0.18
ATF3-208ENST00000465155 PSME4Q14997 1843 aa16.2■□□□□ 0.18
ATF3-208ENST00000465155 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 HIP1O00291 1037 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 CHGBP05060 677 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 TTLL5Q6EMB2 1281 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 SBF1O95248 1867 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 YDJCA8MPS7 323 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 MAP3K12Q12852 859 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 LRRFIP1Q32MZ4 808 aaKnown RBP16.19■□□□□ 0.18
ATF3-208ENST00000465155 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
ATF3-208ENST00000465155 TBC1D22AQ8WUA7 517 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 RAI14Q9P0K7 980 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 MAST2Q6P0Q8 1798 aa16.19■□□□□ 0.18
ATF3-208ENST00000465155 RNF113AO15541 343 aaKnown RBP16.18■□□□□ 0.18
ATF3-208ENST00000465155 PRDX5P30044 214 aa16.18■□□□□ 0.18
ATF3-208ENST00000465155 PRELPP51888 382 aa16.18■□□□□ 0.18
ATF3-208ENST00000465155 GPR162Q16538 588 aa16.18■□□□□ 0.18
ATF3-208ENST00000465155 SLFNL1Q499Z3 407 aa16.18■□□□□ 0.18
ATF3-208ENST00000465155 MFSD14BQ5SR56 506 aa16.18■□□□□ 0.18
ATF3-208ENST00000465155 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
ATF3-208ENST00000465155 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
ATF3-208ENST00000465155 CWC27Q6UX04 472 aaKnown RBP16.18■□□□□ 0.18
ATF3-208ENST00000465155 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
ATF3-208ENST00000465155 JDP2Q8WYK2 163 aa16.18■□□□□ 0.18
ATF3-208ENST00000465155 DICER1Q9UPY3 1922 aaKnown RBP16.18■□□□□ 0.18
ATF3-208ENST00000465155 USP17L3A6NCW0 530 aa16.17■□□□□ 0.18
ATF3-208ENST00000465155 USP17L4A6NCW7 530 aa16.17■□□□□ 0.18
ATF3-208ENST00000465155 ZFYP08048 801 aaPredicted RBP16.17■□□□□ 0.18
ATF3-208ENST00000465155 NMIQ13287 307 aaPredicted RBP16.17■□□□□ 0.18
ATF3-208ENST00000465155 STRIP1Q5VSL9 837 aa16.17■□□□□ 0.18
ATF3-208ENST00000465155 SPTY2D1Q68D10 685 aaPredicted RBP16.17■□□□□ 0.18
ATF3-208ENST00000465155 USP17L1Q7RTZ2 530 aa16.17■□□□□ 0.18
ATF3-208ENST00000465155 TICAM2Q86XR7 235 aa16.17■□□□□ 0.18
ATF3-208ENST00000465155 FAM227BQ96M60 508 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms