RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 FAM46AQ96IP4 442 aaKnown RBP6.21□□□□□ -1.42
GARNL3-213ENST00000464616 ZKSCAN3Q9BRR0 538 aa6.21□□□□□ -1.42
GARNL3-213ENST00000464616 C7orf69Q9H7B7 122 aa6.21□□□□□ -1.42
GARNL3-213ENST00000464616 HIF3AQ9Y2N7 669 aa6.21□□□□□ -1.42
GARNL3-213ENST00000464616 TMEM88BA6NKF7 163 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 TGFB1P01137 390 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 USP11P51784 963 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 RNF43Q68DV7 783 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 INTS5Q6P9B9 1019 aaKnown RBP6.2□□□□□ -1.42
GARNL3-213ENST00000464616 ADAMTSL4Q6UY14 1074 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 FAM20CQ8IXL6 584 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 NXPE3Q969Y0 559 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 HHIPQ96QV1 700 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 DBNDD2Q9BQY9 259 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 CHRDQ9H2X0 955 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 FOXD3Q9UJU5 478 aaPredicted RBP6.2□□□□□ -1.42
GARNL3-213ENST00000464616 BRPF3Q9ULD4 1205 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 SOX13Q9UN79 622 aa6.2□□□□□ -1.42
GARNL3-213ENST00000464616 NFKBIEO00221 500 aa6.19□□□□□ -1.42
GARNL3-213ENST00000464616 GSTM4Q03013 218 aa6.19□□□□□ -1.42
GARNL3-213ENST00000464616 ZNF211Q13398 564 aaPredicted RBP6.19□□□□□ -1.42
GARNL3-213ENST00000464616 GLYCTKQ8IVS8 523 aa6.19□□□□□ -1.42
GARNL3-213ENST00000464616 DDX54Q8TDD1 881 aaKnown RBP6.19□□□□□ -1.42
GARNL3-213ENST00000464616 FAM83CQ9BQN1 747 aa6.19□□□□□ -1.42
GARNL3-213ENST00000464616 ATG3Q9NT62 314 aa6.19□□□□□ -1.42
GARNL3-213ENST00000464616 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.19□□□□□ -1.42
GARNL3-213ENST00000464616 SOX1O00570 391 aaPredicted RBP6.18□□□□□ -1.42
GARNL3-213ENST00000464616 MAP4P27816 1152 aaKnown RBP6.18□□□□□ -1.42
GARNL3-213ENST00000464616 PREPP48147 710 aa6.18□□□□□ -1.42
GARNL3-213ENST00000464616 IRAK1P51617 712 aa6.18□□□□□ -1.42
GARNL3-213ENST00000464616 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.18□□□□□ -1.42
GARNL3-213ENST00000464616 TMC1Q8TDI8 760 aa6.18□□□□□ -1.42
GARNL3-213ENST00000464616 YIPF2Q9BWQ6 316 aa6.18□□□□□ -1.42
GARNL3-213ENST00000464616 CCDC87Q9NVE4 849 aa6.18□□□□□ -1.42
GARNL3-213ENST00000464616 WDR64B1ANS9 1081 aa6.17□□□□□ -1.42
GARNL3-213ENST00000464616 NDUFB5O43674 189 aa6.17□□□□□ -1.42
GARNL3-213ENST00000464616 NPR3P17342 541 aa6.17□□□□□ -1.42
GARNL3-213ENST00000464616 CD97P48960 835 aa6.17□□□□□ -1.42
GARNL3-213ENST00000464616 NFKBIBQ15653 356 aa6.17□□□□□ -1.42
GARNL3-213ENST00000464616 HP1BP3Q5SSJ5 553 aaPredicted RBP6.17□□□□□ -1.42
GARNL3-213ENST00000464616 FBXL6Q8N531 539 aa6.17□□□□□ -1.42
GARNL3-213ENST00000464616 SHKBP1Q8TBC3 707 aa6.17□□□□□ -1.42
GARNL3-213ENST00000464616 ZFYVE1Q9HBF4 777 aa6.17□□□□□ -1.42
GARNL3-213ENST00000464616 ZFYVE28Q9HCC9 887 aa6.17□□□□□ -1.42
GARNL3-213ENST00000464616 CARNS1A5YM72 827 aa6.16□□□□□ -1.42
GARNL3-213ENST00000464616 MEGF11A6BM72 1044 aa6.16□□□□□ -1.42
GARNL3-213ENST00000464616 H3BRB1 525 aa6.16□□□□□ -1.42
GARNL3-213ENST00000464616 FZD6O60353 706 aa6.16□□□□□ -1.42
GARNL3-213ENST00000464616 POLR3DP05423 398 aaPredicted RBP6.16□□□□□ -1.42
GARNL3-213ENST00000464616 EXOSC6Q5RKV6 272 aaKnown RBP6.16□□□□□ -1.42
GARNL3-213ENST00000464616 PAOXQ6QHF9 649 aa6.16□□□□□ -1.42
GARNL3-213ENST00000464616 ZDHHC13Q8IUH4 622 aa6.16□□□□□ -1.42
GARNL3-213ENST00000464616 MFSD14AQ96MC6 490 aa6.16□□□□□ -1.42
GARNL3-213ENST00000464616 TUT1Q9H6E5 874 aaKnown RBP6.16□□□□□ -1.42
GARNL3-213ENST00000464616 SOX17Q9H6I2 414 aaPredicted RBP6.16□□□□□ -1.42
GARNL3-213ENST00000464616 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
GARNL3-213ENST00000464616 USTQ9Y2C2 406 aa6.16□□□□□ -1.42
GARNL3-213ENST00000464616 PAX4O43316 350 aa6.15□□□□□ -1.42
GARNL3-213ENST00000464616 CYP11A1P05108 521 aa6.15□□□□□ -1.42
GARNL3-213ENST00000464616 PDE3BQ13370 1112 aa6.15□□□□□ -1.42
GARNL3-213ENST00000464616 HGSNATQ68CP4 663 aa6.15□□□□□ -1.42
GARNL3-213ENST00000464616 VN1R5Q7Z5H4 357 aa6.15□□□□□ -1.42
GARNL3-213ENST00000464616 OSBPL1AQ9BXW6 950 aa6.15□□□□□ -1.42
GARNL3-213ENST00000464616 BHLHE41Q9C0J9 482 aaPredicted RBP6.15□□□□□ -1.42
GARNL3-213ENST00000464616 LIN7BQ9HAP6 207 aa6.15□□□□□ -1.42
GARNL3-213ENST00000464616 LATS2Q9NRM7 1088 aa6.15□□□□□ -1.42
GARNL3-213ENST00000464616 LEMD3Q9Y2U8 911 aa6.15□□□□□ -1.42
GARNL3-213ENST00000464616 LOC100289279A0A1B0GTE1 492 aa6.14□□□□□ -1.43
GARNL3-213ENST00000464616 FAM95CA0A1B0GW59 222 aa6.14□□□□□ -1.43
GARNL3-213ENST00000464616 WNT11O96014 354 aa6.14□□□□□ -1.43
GARNL3-213ENST00000464616 ESRRAP11474 423 aaPredicted RBP6.14□□□□□ -1.43
GARNL3-213ENST00000464616 GP2P55259 537 aaKnown RBP6.14□□□□□ -1.43
GARNL3-213ENST00000464616 PDE4CQ08493 712 aa6.14□□□□□ -1.43
GARNL3-213ENST00000464616 SGO2Q562F6 1265 aa6.14□□□□□ -1.43
GARNL3-213ENST00000464616 GJD3Q8N144 294 aa6.14□□□□□ -1.43
GARNL3-213ENST00000464616 SMG8Q8ND04 991 aaKnown RBP6.14□□□□□ -1.43
GARNL3-213ENST00000464616 ARID3AQ99856 593 aa6.14□□□□□ -1.43
GARNL3-213ENST00000464616 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
GARNL3-213ENST00000464616 EGFL7Q9UHF1 273 aa6.14□□□□□ -1.43
GARNL3-213ENST00000464616 ANGEL1Q9UNK9 670 aaKnown RBP6.14□□□□□ -1.43
GARNL3-213ENST00000464616 A0A096LPE4 126 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 A0A1W2PPZ6 126 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 METTL12A8MUP2 240 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 TM4SF5O14894 197 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 ICMTO60725 284 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 HNRNPUQ00839 825 aaKnown RBP eCLIP6.13□□□□□ -1.43
GARNL3-213ENST00000464616 PCDH1Q08174 1060 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 MCTP1Q6DN14 999 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 CORO1BQ9BR76 489 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 TMPRSS13Q9BYE2 586 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 EHD4Q9H223 541 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 CLEC4MQ9H2X3 399 aaPredicted RBP6.13□□□□□ -1.43
GARNL3-213ENST00000464616 SUGCTQ9HAC7 445 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 PIM2Q9P1W9 311 aa6.13□□□□□ -1.43
GARNL3-213ENST00000464616 KIAA1324LA8MWY0 1029 aaPredicted RBP6.12□□□□□ -1.43
GARNL3-213ENST00000464616 POU4F3Q15319 338 aa6.12□□□□□ -1.43
GARNL3-213ENST00000464616 PEAR1Q5VY43 1037 aaPredicted RBP6.12□□□□□ -1.43
GARNL3-213ENST00000464616 FBLIM1Q8WUP2 373 aa6.12□□□□□ -1.43
GARNL3-213ENST00000464616 METTL22Q9BUU2 404 aaPredicted RBP6.12□□□□□ -1.43
GARNL3-213ENST00000464616 A0A1W2PP55 124 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms