RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 CTSWP56202 376 aa12.92□□□□□ -0.34
PITRM1-209ENST00000464395 CAMK4Q16566 473 aa12.92□□□□□ -0.34
PITRM1-209ENST00000464395 CHST3Q7LGC8 479 aa12.92□□□□□ -0.34
PITRM1-209ENST00000464395 ARID4AP29374 1257 aaPredicted RBP12.91□□□□□ -0.34
PITRM1-209ENST00000464395 ADD2P35612 726 aa12.91□□□□□ -0.34
PITRM1-209ENST00000464395 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
PITRM1-209ENST00000464395 PLA2G4DQ86XP0 818 aa12.91□□□□□ -0.34
PITRM1-209ENST00000464395 RGS22Q8NE09 1264 aa12.91□□□□□ -0.34
PITRM1-209ENST00000464395 TDRD7Q8NHU6 1098 aaKnown RBP12.91□□□□□ -0.34
PITRM1-209ENST00000464395 USP28Q96RU2 1077 aa12.91□□□□□ -0.34
PITRM1-209ENST00000464395 CBX8Q9HC52 389 aa12.91□□□□□ -0.34
PITRM1-209ENST00000464395 ITGA6P23229 1130 aa12.91□□□□□ -0.34
PITRM1-209ENST00000464395 TTC12Q9H892 705 aaPredicted RBP12.91□□□□□ -0.34
PITRM1-209ENST00000464395 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
PITRM1-209ENST00000464395 DENND2AQ9ULE3 1009 aa12.91□□□□□ -0.34
PITRM1-209ENST00000464395 ZBTB1Q9Y2K1 713 aa12.91□□□□□ -0.34
PITRM1-209ENST00000464395 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.34
PITRM1-209ENST00000464395 IQCB1Q15051 598 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
PITRM1-209ENST00000464395 TACC3Q9Y6A5 838 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 ERVV-1B6SEH8 477 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 FKBP4Q02790 459 aaKnown RBP eCLIP12.9□□□□□ -0.34
PITRM1-209ENST00000464395 IFIT5Q13325 482 aaKnown RBP12.9□□□□□ -0.34
PITRM1-209ENST00000464395 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 TTC39AQ5SRH9 613 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 ATL3Q6DD88 541 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 DLEC1Q9Y238 1755 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 LUZP1Q86V48 1076 aa12.9□□□□□ -0.34
PITRM1-209ENST00000464395 STARD3NLO95772 234 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 HSP90B1P14625 803 aaKnown RBP12.89□□□□□ -0.35
PITRM1-209ENST00000464395 EVA1CP58658 441 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 ANO6Q4KMQ2 910 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 CKAP2LQ8IYA6 745 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 KIAA1524Q8TCG1 905 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
PITRM1-209ENST00000464395 SCN7AQ01118 1682 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 GPAA1O43292 621 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 CFAP45Q9UL16 551 aa12.89□□□□□ -0.35
PITRM1-209ENST00000464395 KIAA2012Q0VF49 1180 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 INTS5Q6P9B9 1019 aaKnown RBP12.88□□□□□ -0.35
PITRM1-209ENST00000464395 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 PDE8BO95263 885 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 HSP90AB3PQ58FF7 597 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 TBC1D10CQ8IV04 446 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 MPNDQ8N594 471 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 ZMYND15Q9H091 742 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 PYCARDQ9ULZ3 195 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 R3HCC1Q9Y3T6 440 aaKnown RBP12.88□□□□□ -0.35
PITRM1-209ENST00000464395 TAF1P21675 1872 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 ZMYM6O95789 1325 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 IL6STP40189 918 aaPredicted RBP12.88□□□□□ -0.35
PITRM1-209ENST00000464395 NOLC1Q14978 699 aaKnown RBP eCLIP12.88□□□□□ -0.35
PITRM1-209ENST00000464395 C17orf53Q8N3J3 647 aaPredicted RBP12.88□□□□□ -0.35
PITRM1-209ENST00000464395 RTEL1Q9NZ71 1219 aa12.88□□□□□ -0.35
PITRM1-209ENST00000464395 NID2Q14112 1375 aa12.87□□□□□ -0.35
PITRM1-209ENST00000464395 EIF5P55010 431 aaKnown RBP12.87□□□□□ -0.35
PITRM1-209ENST00000464395 UBE3CQ15386 1083 aa12.87□□□□□ -0.35
PITRM1-209ENST00000464395 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
PITRM1-209ENST00000464395 CTNNA3Q9UI47 895 aa12.87□□□□□ -0.35
PITRM1-209ENST00000464395 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
PITRM1-209ENST00000464395 GPTP24298 496 aa12.87□□□□□ -0.35
PITRM1-209ENST00000464395 HAND2P61296 217 aa12.87□□□□□ -0.35
PITRM1-209ENST00000464395 FMR1NBQ8N0W7 255 aaPredicted RBP12.87□□□□□ -0.35
PITRM1-209ENST00000464395 KIF28PB7ZC32 967 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 PRC1O43663 620 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 PDE8AO60658 829 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 H3BQV1 296 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 PHKA1P46020 1223 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 IMMTQ16891 758 aaKnown RBP12.86□□□□□ -0.35
PITRM1-209ENST00000464395 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 CCDC102BQ68D86 513 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 C11orf57Q6ZUT1 292 aaPredicted RBP12.86□□□□□ -0.35
PITRM1-209ENST00000464395 RTL9Q8NET4 1388 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 ALX1Q15699 326 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 SARM1Q6SZW1 724 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 SASS6Q6UVJ0 657 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 LDHAL6AQ6ZMR3 332 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 AK7Q96M32 723 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 SENP2Q9HC62 589 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 FAM217BQ9NTX9 383 aaPredicted RBP12.86□□□□□ -0.35
PITRM1-209ENST00000464395 PCDHA7Q9UN72 937 aa12.86□□□□□ -0.35
PITRM1-209ENST00000464395 ANKRD18BA2A2Z9 1011 aa12.85□□□□□ -0.35
PITRM1-209ENST00000464395 GTF2F1P35269 517 aaKnown RBP eCLIP12.85□□□□□ -0.35
PITRM1-209ENST00000464395 ZNF75DP51815 510 aa12.85□□□□□ -0.35
PITRM1-209ENST00000464395 NTRK3Q16288 839 aa12.85□□□□□ -0.35
PITRM1-209ENST00000464395 METTL24Q5JXM2 366 aa12.85□□□□□ -0.35
PITRM1-209ENST00000464395 CCAR1Q8IX12 1150 aaKnown RBP12.85□□□□□ -0.35
PITRM1-209ENST00000464395 DHX40Q8IX18 779 aaKnown RBP12.85□□□□□ -0.35
PITRM1-209ENST00000464395 LINC00301Q8NCQ3 95 aa12.85□□□□□ -0.35
PITRM1-209ENST00000464395 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
PITRM1-209ENST00000464395 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
PITRM1-209ENST00000464395 SH2B2O14492 632 aaPredicted RBP12.85□□□□□ -0.35
PITRM1-209ENST00000464395 RRP9O43818 475 aaKnown RBP12.85□□□□□ -0.35
PITRM1-209ENST00000464395 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
PITRM1-209ENST00000464395 STRBPQ96SI9 672 aaKnown RBP12.85□□□□□ -0.35
PITRM1-209ENST00000464395 EPB41L4AQ9HCS5 686 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms