RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 AEBP1Q8IUX7 1158 aa11.48□□□□□ -0.57
CCDC144A-211ENST00000463809 AKTIPQ9H8T0 292 aa11.48□□□□□ -0.57
CCDC144A-211ENST00000463809 SOX1O00570 391 aaPredicted RBP11.47□□□□□ -0.57
CCDC144A-211ENST00000463809 DDX3YO15523 660 aaKnown RBP11.47□□□□□ -0.57
CCDC144A-211ENST00000463809 ADAM23O75077 832 aa11.47□□□□□ -0.57
CCDC144A-211ENST00000463809 ALX3O95076 343 aa11.47□□□□□ -0.57
CCDC144A-211ENST00000463809 WISP1O95388 367 aa11.47□□□□□ -0.57
CCDC144A-211ENST00000463809 GRIA4P48058 902 aa11.47□□□□□ -0.57
CCDC144A-211ENST00000463809 RSPO4Q2I0M5 234 aaPredicted RBP11.47□□□□□ -0.57
CCDC144A-211ENST00000463809 NKAPLQ5M9Q1 402 aa11.47□□□□□ -0.57
CCDC144A-211ENST00000463809 IKBKEQ14164 716 aa11.46□□□□□ -0.57
CCDC144A-211ENST00000463809 SUZ12Q15022 739 aaKnown RBP11.46□□□□□ -0.57
CCDC144A-211ENST00000463809 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.46□□□□□ -0.57
CCDC144A-211ENST00000463809 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.57
CCDC144A-211ENST00000463809 SLC7A3Q8WY07 619 aa11.46□□□□□ -0.57
CCDC144A-211ENST00000463809 A0A096LPE4 126 aa11.45□□□□□ -0.58
CCDC144A-211ENST00000463809 A0A1W2PPZ6 126 aa11.45□□□□□ -0.58
CCDC144A-211ENST00000463809 K7ELQ4 463 aaPredicted RBP11.45□□□□□ -0.58
CCDC144A-211ENST00000463809 PLCB3Q01970 1234 aa11.45□□□□□ -0.58
CCDC144A-211ENST00000463809 SPRED3Q2MJR0 410 aa11.45□□□□□ -0.58
CCDC144A-211ENST00000463809 AGGF1Q8N302 714 aaeCLIP11.45□□□□□ -0.58
CCDC144A-211ENST00000463809 MEGF10Q96KG7 1140 aa11.45□□□□□ -0.58
CCDC144A-211ENST00000463809 EHD4Q9H223 541 aa11.45□□□□□ -0.58
CCDC144A-211ENST00000463809 ESRRAP11474 423 aaPredicted RBP11.44□□□□□ -0.58
CCDC144A-211ENST00000463809 C19orf57Q0VDD7 668 aa11.44□□□□□ -0.58
CCDC144A-211ENST00000463809 Q6ZS46 218 aa11.44□□□□□ -0.58
CCDC144A-211ENST00000463809 EPS8L3Q8TE67 593 aaKnown RBP11.44□□□□□ -0.58
CCDC144A-211ENST00000463809 ASB16Q96NS5 453 aa11.44□□□□□ -0.58
CCDC144A-211ENST00000463809 ARL4DP49703 201 aa11.43□□□□□ -0.58
CCDC144A-211ENST00000463809 KIAA1211Q6ZU35 1233 aa11.43□□□□□ -0.58
CCDC144A-211ENST00000463809 ZSCAN29Q8IWY8 852 aaPredicted RBP11.43□□□□□ -0.58
CCDC144A-211ENST00000463809 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
CCDC144A-211ENST00000463809 UBASH3BQ8TF42 649 aa11.43□□□□□ -0.58
CCDC144A-211ENST00000463809 NLRP12P59046 1061 aa11.42□□□□□ -0.58
CCDC144A-211ENST00000463809 ENOX2Q16206 610 aaKnown RBP11.42□□□□□ -0.58
CCDC144A-211ENST00000463809 DUOXA2Q1HG44 320 aa11.42□□□□□ -0.58
CCDC144A-211ENST00000463809 ACAD11Q709F0 780 aa11.42□□□□□ -0.58
CCDC144A-211ENST00000463809 TP53INP1Q96A56 240 aa11.42□□□□□ -0.58
CCDC144A-211ENST00000463809 SOX17Q9H6I2 414 aaPredicted RBP11.42□□□□□ -0.58
CCDC144A-211ENST00000463809 GADD45BO75293 160 aaPredicted RBP11.41□□□□□ -0.58
CCDC144A-211ENST00000463809 CLEC4MQ9H2X3 399 aaPredicted RBP11.41□□□□□ -0.58
CCDC144A-211ENST00000463809 ABCB6Q9NP58 842 aa11.41□□□□□ -0.58
CCDC144A-211ENST00000463809 PNMA6FA0A0J9YX94 578 aa11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 ITPKAP23677 461 aa11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 ITGB7P26010 798 aa11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 FMR1Q06787 632 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 PCDH1Q08174 1060 aa11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 ZNF423Q2M1K9 1284 aa11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 PI16Q6UXB8 463 aa11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 SEMA6BQ9H3T3 888 aa11.4□□□□□ -0.58
CCDC144A-211ENST00000463809 DYRK3O43781 588 aa11.39□□□□□ -0.59
CCDC144A-211ENST00000463809 H2AFB1P0C5Y9 115 aa11.39□□□□□ -0.59
CCDC144A-211ENST00000463809 H2AFB2P0C5Z0 115 aa11.39□□□□□ -0.59
CCDC144A-211ENST00000463809 GRM2Q14416 872 aa11.39□□□□□ -0.59
CCDC144A-211ENST00000463809 ZNF576Q9H609 170 aa11.38□□□□□ -0.59
CCDC144A-211ENST00000463809 GLB1P16278 677 aa11.37□□□□□ -0.59
CCDC144A-211ENST00000463809 UBL7Q96S82 380 aaPredicted RBP11.37□□□□□ -0.59
CCDC144A-211ENST00000463809 TRAK1Q9UPV9 953 aa11.37□□□□□ -0.59
CCDC144A-211ENST00000463809 TMEM238LA0A1B0GVL6 79 aa11.36□□□□□ -0.59
CCDC144A-211ENST00000463809 MAPK8P45983 427 aa11.36□□□□□ -0.59
CCDC144A-211ENST00000463809 PTPN12Q05209 780 aaKnown RBP11.36□□□□□ -0.59
CCDC144A-211ENST00000463809 NRSN2Q9GZP1 204 aa11.36□□□□□ -0.59
CCDC144A-211ENST00000463809 NLRP2Q9NX02 1062 aa11.36□□□□□ -0.59
CCDC144A-211ENST00000463809 GSTM4Q03013 218 aa11.35□□□□□ -0.59
CCDC144A-211ENST00000463809 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC144A-211ENST00000463809 LOC100289279A0A1B0GTE1 492 aa11.34□□□□□ -0.59
CCDC144A-211ENST00000463809 B3GALT4O96024 378 aa11.34□□□□□ -0.59
CCDC144A-211ENST00000463809 SETDB2Q96T68 719 aa11.34□□□□□ -0.59
CCDC144A-211ENST00000463809 BCO2Q9BYV7 579 aa11.34□□□□□ -0.59
CCDC144A-211ENST00000463809 RUSC1Q9BVN2 902 aa11.33□□□□□ -0.6
CCDC144A-211ENST00000463809 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
CCDC144A-211ENST00000463809 CEP41Q9BYV8 373 aa11.33□□□□□ -0.6
CCDC144A-211ENST00000463809 RNF208Q9H0X6 261 aa11.33□□□□□ -0.6
CCDC144A-211ENST00000463809 MEGF11A6BM72 1044 aa11.32□□□□□ -0.6
CCDC144A-211ENST00000463809 EIF4EBP3O60516 100 aaPredicted RBP11.32□□□□□ -0.6
CCDC144A-211ENST00000463809 DLGAP3O95886 979 aa11.32□□□□□ -0.6
CCDC144A-211ENST00000463809 FBF1Q8TES7 1133 aa11.32□□□□□ -0.6
CCDC144A-211ENST00000463809 WWC3Q9ULE0 1092 aa11.32□□□□□ -0.6
CCDC144A-211ENST00000463809 P4HBP07237 508 aaKnown RBP11.31□□□□□ -0.6
CCDC144A-211ENST00000463809 RPS26P11Q5JNZ5 115 aaPredicted RBP11.31□□□□□ -0.6
CCDC144A-211ENST00000463809 PRR23CQ6ZRP0 262 aa11.31□□□□□ -0.6
CCDC144A-211ENST00000463809 FAM46AQ96IP4 442 aaKnown RBP11.31□□□□□ -0.6
CCDC144A-211ENST00000463809 TMPRSS13Q9BYE2 586 aa11.31□□□□□ -0.6
CCDC144A-211ENST00000463809 FCGRTP55899 365 aa11.3□□□□□ -0.6
CCDC144A-211ENST00000463809 FAAP100Q0VG06 881 aa11.3□□□□□ -0.6
CCDC144A-211ENST00000463809 NXPE4Q6UWF7 544 aa11.3□□□□□ -0.6
CCDC144A-211ENST00000463809 ARMC10Q8N2F6 343 aa11.3□□□□□ -0.6
CCDC144A-211ENST00000463809 TRIM56Q9BRZ2 755 aaKnown RBP11.3□□□□□ -0.6
CCDC144A-211ENST00000463809 PRSS36Q5K4E3 855 aa11.29□□□□□ -0.6
CCDC144A-211ENST00000463809 ANKRD34AQ69YU3 496 aa11.29□□□□□ -0.6
CCDC144A-211ENST00000463809 ALG1LQ6GMV1 187 aa11.29□□□□□ -0.6
CCDC144A-211ENST00000463809 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
CCDC144A-211ENST00000463809 UVSSAQ2YD98 709 aa11.28□□□□□ -0.6
CCDC144A-211ENST00000463809 DTHD1Q6ZMT9 781 aa11.28□□□□□ -0.6
CCDC144A-211ENST00000463809 CYP11A1P05108 521 aa11.27□□□□□ -0.61
CCDC144A-211ENST00000463809 CTSBP07858 339 aa11.27□□□□□ -0.61
CCDC144A-211ENST00000463809 XRCC5P13010 732 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms