RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 BRF1Q92994 677 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 GTF3C6Q969F1 213 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 AGXT2Q9BYV1 514 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
MSH5-211ENST00000463144 DOCK2Q92608 1830 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 GADD45BO75293 160 aaPredicted RBP12.07□□□□□ -0.48
MSH5-211ENST00000463144 IDH1O75874 414 aaKnown RBP12.07□□□□□ -0.48
MSH5-211ENST00000463144 PDE6AP16499 860 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 BCAMP50895 628 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 UBE3CQ15386 1083 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 USP48Q86UV5 1035 aa12.07□□□□□ -0.48
MSH5-211ENST00000463144 ATRNO75882 1429 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 ZNF532Q9HCE3 1301 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 COL24A1Q17RW2 1714 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 HAND2P61296 217 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 LARP1BQ659C4 914 aaKnown RBP12.06□□□□□ -0.48
MSH5-211ENST00000463144 ZSCAN25Q6NSZ9 544 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 CHST3Q7LGC8 479 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 ARHGEF1Q92888 912 aaKnown RBP12.06□□□□□ -0.48
MSH5-211ENST00000463144 CNPY2Q9Y2B0 182 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 ZSCAN23Q3MJ62 389 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
MSH5-211ENST00000463144 PANK2Q9BZ23 570 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 GRPEL1Q9HAV7 217 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 TMEM63CQ9P1W3 806 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 CTNNA3Q9UI47 895 aa12.06□□□□□ -0.48
MSH5-211ENST00000463144 JAK2O60674 1132 aa12.05□□□□□ -0.48
MSH5-211ENST00000463144 MRE11P49959 708 aa12.05□□□□□ -0.48
MSH5-211ENST00000463144 ZNF445P59923 1031 aa12.05□□□□□ -0.48
MSH5-211ENST00000463144 APOBRQ0VD83 1088 aa12.05□□□□□ -0.48
MSH5-211ENST00000463144 SCRN1Q12765 414 aa12.05□□□□□ -0.48
MSH5-211ENST00000463144 SEPT12Q8IYM1 358 aa12.05□□□□□ -0.48
MSH5-211ENST00000463144 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
MSH5-211ENST00000463144 CELF1Q92879 486 aaKnown RBP12.05□□□□□ -0.48
MSH5-211ENST00000463144 RTCBQ9Y3I0 505 aaKnown RBP12.05□□□□□ -0.48
MSH5-211ENST00000463144 VPS37CA5D8V6 355 aaPredicted RBP12.04□□□□□ -0.48
MSH5-211ENST00000463144 PFKFB2O60825 505 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 IMMTQ16891 758 aaKnown RBP12.04□□□□□ -0.48
MSH5-211ENST00000463144 ANKRD18AQ8IVF6 992 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
MSH5-211ENST00000463144 ISY1Q9ULR0 285 aaKnown RBP12.04□□□□□ -0.48
MSH5-211ENST00000463144 C4AP0C0L4 1744 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 C4BP0C0L5 1744 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 ZPR1O75312 459 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 STRBPQ96SI9 672 aaKnown RBP12.04□□□□□ -0.48
MSH5-211ENST00000463144 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
MSH5-211ENST00000463144 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
MSH5-211ENST00000463144 CTDNEP1O95476 244 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 MBD3O95983 291 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
MSH5-211ENST00000463144 FGD1P98174 961 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 DNM1Q05193 864 aaKnown RBP12.03□□□□□ -0.48
MSH5-211ENST00000463144 CDC37L1Q7L3B6 337 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 TRPC5Q9UL62 973 aaPredicted RBP12.03□□□□□ -0.48
MSH5-211ENST00000463144 ZNF213O14771 459 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 NBPF5PQ86XG9 351 aaPredicted RBP12.03□□□□□ -0.48
MSH5-211ENST00000463144 MB21D2Q8IYB1 491 aaPredicted RBP12.03□□□□□ -0.48
MSH5-211ENST00000463144 FBXL16Q8N461 479 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 MAGEB6Q8N7X4 407 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 SMARCC2Q8TAQ2 1214 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 NYXQ9GZU5 481 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 DENND2AQ9ULE3 1009 aa12.03□□□□□ -0.48
MSH5-211ENST00000463144 PDIA3P30101 505 aaKnown RBP12.02□□□□□ -0.49
MSH5-211ENST00000463144 GYG1P46976 350 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 ANTXR2P58335 489 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 MAP3K12Q12852 859 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 IQSEC3Q9UPP2 1182 aaPredicted RBP12.02□□□□□ -0.49
MSH5-211ENST00000463144 ATP6V1DQ9Y5K8 247 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 ZNF804BA4D1E1 1349 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 PDCP20941 246 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 TM4SF1P30408 202 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 EVCP57679 992 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 UBE4AQ14139 1066 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 FAM196AQ6ZSG2 479 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 FERMT3Q86UX7 667 aa12.02□□□□□ -0.49
MSH5-211ENST00000463144 NSUN7Q8NE18 718 aaKnown RBP12.02□□□□□ -0.49
MSH5-211ENST00000463144 ZNF274Q96GC6 653 aaPredicted RBP12.02□□□□□ -0.49
MSH5-211ENST00000463144 PHF14O94880 888 aa12.01□□□□□ -0.49
MSH5-211ENST00000463144 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
MSH5-211ENST00000463144 CCT2P78371 535 aaKnown RBP12.01□□□□□ -0.49
MSH5-211ENST00000463144 FAM173BQ6P4H8 233 aa12.01□□□□□ -0.49
MSH5-211ENST00000463144 TBC1D10CQ8IV04 446 aa12.01□□□□□ -0.49
MSH5-211ENST00000463144 DDX11Q96FC9 970 aa12.01□□□□□ -0.49
MSH5-211ENST00000463144 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
MSH5-211ENST00000463144 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
MSH5-211ENST00000463144 NCOA5Q9HCD5 579 aaKnown RBP12.01□□□□□ -0.49
MSH5-211ENST00000463144 COL1A1P02452 1464 aaPredicted RBP12.01□□□□□ -0.49
MSH5-211ENST00000463144 PRC1O43663 620 aa12□□□□□ -0.49
MSH5-211ENST00000463144 APPP05067 770 aa12□□□□□ -0.49
MSH5-211ENST00000463144 RPS8P62241 208 aaKnown RBP12□□□□□ -0.49
MSH5-211ENST00000463144 TPTE2Q6XPS3 522 aa12□□□□□ -0.49
MSH5-211ENST00000463144 NCOA7Q8NI08 942 aa12□□□□□ -0.49
MSH5-211ENST00000463144 AIDAQ96BJ3 306 aa12□□□□□ -0.49
MSH5-211ENST00000463144 LLPHQ9BRT6 129 aaKnown RBP12□□□□□ -0.49
MSH5-211ENST00000463144 QTRT2Q9H974 415 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms