RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 ZSWIM6Q9HCJ5 1215 aa10.4□□□□□ -0.74
GARNL3-212ENST00000463005 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 C6orf229H3BNL8 230 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 SOX10P56693 466 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 FKBP1BP68106 108 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 AIMP1Q12904 312 aaKnown RBP10.39□□□□□ -0.75
GARNL3-212ENST00000463005 DLK2Q6UY11 383 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 XAGE3Q8WTP9 111 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 ZC3H12CQ9C0D7 883 aaKnown RBP10.39□□□□□ -0.75
GARNL3-212ENST00000463005 DBNDD1Q9H9R9 158 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 ADGRG1Q9Y653 693 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 TNRC18O15417 2968 aaPredicted RBP10.39□□□□□ -0.75
GARNL3-212ENST00000463005 DUOX1Q9NRD9 1551 aa10.39□□□□□ -0.75
GARNL3-212ENST00000463005 ADM5C9JUS6 153 aa10.38□□□□□ -0.75
GARNL3-212ENST00000463005 ECE2O60344 883 aa10.38□□□□□ -0.75
GARNL3-212ENST00000463005 ANXA1P04083 346 aa10.38□□□□□ -0.75
GARNL3-212ENST00000463005 VIL1P09327 827 aaKnown RBP10.38□□□□□ -0.75
GARNL3-212ENST00000463005 PROSER3Q2NL68 480 aa10.38□□□□□ -0.75
GARNL3-212ENST00000463005 KIF4BQ2VIQ3 1234 aa10.38□□□□□ -0.75
GARNL3-212ENST00000463005 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
GARNL3-212ENST00000463005 POLLQ9UGP5 575 aa10.38□□□□□ -0.75
GARNL3-212ENST00000463005 EGFRP00533 1210 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 HSP90B1P14625 803 aaKnown RBP10.37□□□□□ -0.75
GARNL3-212ENST00000463005 RIPK4P57078 832 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 RPS8P62241 208 aaKnown RBP10.37□□□□□ -0.75
GARNL3-212ENST00000463005 LMOD3Q0VAK6 560 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 DIEXFQ68CQ4 756 aaKnown RBP10.37□□□□□ -0.75
GARNL3-212ENST00000463005 ANKRD13DQ6ZTN6 518 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 AGBL3Q8NEM8 1001 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 PLBD2Q8NHP8 589 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 TBC1D16Q8TBP0 767 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 CELF1Q92879 486 aaKnown RBP10.37□□□□□ -0.75
GARNL3-212ENST00000463005 CDCA7LQ96GN5 454 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 ISCA1Q9BUE6 129 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 SCN9AQ15858 1988 aa10.37□□□□□ -0.75
GARNL3-212ENST00000463005 PSME4Q14997 1843 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 GPSM2P81274 684 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 TRIM28Q13263 835 aaKnown RBP10.36□□□□□ -0.75
GARNL3-212ENST00000463005 NOM1Q5C9Z4 860 aaKnown RBP10.36□□□□□ -0.75
GARNL3-212ENST00000463005 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 TTC13Q8NBP0 860 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 KCNQ5Q9NR82 932 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 PODXL2Q9NZ53 605 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 HDAC9Q9UKV0 1011 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 HPS5Q9UPZ3 1129 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
GARNL3-212ENST00000463005 PITPNM2Q9BZ72 1349 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 ZNF609O15014 1411 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 TM4SF4P48230 202 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 PRSS12P56730 875 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 ZNF280AP59817 542 aaPredicted RBP10.35□□□□□ -0.75
GARNL3-212ENST00000463005 SCARF1Q14162 830 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 RASAL3Q86YV0 1011 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 PXYLP1Q8TE99 480 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 GCC1Q96CN9 775 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 FAM89AQ96GI7 184 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 GGA3Q9NZ52 723 aa10.35□□□□□ -0.75
GARNL3-212ENST00000463005 PAPPA2Q9BXP8 1791 aa10.34□□□□□ -0.75
GARNL3-212ENST00000463005 ANP32CO43423 234 aa10.34□□□□□ -0.75
GARNL3-212ENST00000463005 HOXB1P14653 301 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-212ENST00000463005 ANGEL2Q5VTE6 544 aaKnown RBP10.34□□□□□ -0.75
GARNL3-212ENST00000463005 RSBN1LQ6PCB5 846 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-212ENST00000463005 DDRGK1Q96HY6 314 aa10.34□□□□□ -0.75
GARNL3-212ENST00000463005 GPCPD1Q9NPB8 672 aa10.34□□□□□ -0.75
GARNL3-212ENST00000463005 DBF4Q9UBU7 674 aaPredicted RBP10.34□□□□□ -0.75
GARNL3-212ENST00000463005 CHL1O00533 1208 aa10.33□□□□□ -0.76
GARNL3-212ENST00000463005 IRS4O14654 1257 aaPredicted RBP10.33□□□□□ -0.76
GARNL3-212ENST00000463005 HOXB7P09629 217 aa10.33□□□□□ -0.76
GARNL3-212ENST00000463005 USP17L8P0C7I0 530 aa10.33□□□□□ -0.76
GARNL3-212ENST00000463005 TMPOP42166 694 aaKnown RBP10.33□□□□□ -0.76
GARNL3-212ENST00000463005 MMP14P50281 582 aa10.33□□□□□ -0.76
GARNL3-212ENST00000463005 FBXO46Q6PJ61 603 aaPredicted RBP10.33□□□□□ -0.76
GARNL3-212ENST00000463005 PODNQ7Z5L7 613 aa10.33□□□□□ -0.76
GARNL3-212ENST00000463005 ZNF296Q8WUU4 475 aaPredicted RBP10.33□□□□□ -0.76
GARNL3-212ENST00000463005 HYPKQ9NX55 129 aa10.33□□□□□ -0.76
GARNL3-212ENST00000463005 ANKIB1Q9P2G1 1089 aa10.33□□□□□ -0.76
GARNL3-212ENST00000463005 GGA1Q9UJY5 639 aa10.33□□□□□ -0.76
GARNL3-212ENST00000463005 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
GARNL3-212ENST00000463005 GPR25O00155 361 aa10.32□□□□□ -0.76
GARNL3-212ENST00000463005 TBC1D8O95759 1140 aa10.32□□□□□ -0.76
GARNL3-212ENST00000463005 SSTR3P32745 418 aaPredicted RBP10.32□□□□□ -0.76
GARNL3-212ENST00000463005 CLCN1P35523 988 aa10.32□□□□□ -0.76
GARNL3-212ENST00000463005 PROX2Q3B8N5 592 aa10.32□□□□□ -0.76
GARNL3-212ENST00000463005 GMLQ99445 158 aa10.32□□□□□ -0.76
GARNL3-212ENST00000463005 CFHR5Q9BXR6 569 aa10.32□□□□□ -0.76
GARNL3-212ENST00000463005 MYOZ2Q9NPC6 264 aa10.32□□□□□ -0.76
GARNL3-212ENST00000463005 CHPF2Q9P2E5 772 aa10.32□□□□□ -0.76
GARNL3-212ENST00000463005 ASTN2O75129 1339 aaPredicted RBP10.32□□□□□ -0.76
GARNL3-212ENST00000463005 USP17L3A6NCW0 530 aa10.31□□□□□ -0.76
GARNL3-212ENST00000463005 USP17L4A6NCW7 530 aa10.31□□□□□ -0.76
GARNL3-212ENST00000463005 UFL1O94874 794 aa10.31□□□□□ -0.76
GARNL3-212ENST00000463005 NF2P35240 595 aa10.31□□□□□ -0.76
GARNL3-212ENST00000463005 SREBF2Q12772 1141 aa10.31□□□□□ -0.76
GARNL3-212ENST00000463005 HDGFL1Q5TGJ6 251 aa10.31□□□□□ -0.76
GARNL3-212ENST00000463005 USP17L1Q7RTZ2 530 aa10.31□□□□□ -0.76
GARNL3-212ENST00000463005 ZBTB38Q8NAP3 1195 aaPredicted RBP10.31□□□□□ -0.76
GARNL3-212ENST00000463005 UBE2Q2LH0YL09 131 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms