RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 KRT24Q2M2I5 525 aa6.69□□□□□ -1.34
PDCD4-204ENST00000462577 DUSP27Q5VZP5 1158 aa6.69□□□□□ -1.34
PDCD4-204ENST00000462577 USPL1Q5W0Q7 1092 aa6.69□□□□□ -1.34
PDCD4-204ENST00000462577 SMIM5Q71RC9 77 aa6.69□□□□□ -1.34
PDCD4-204ENST00000462577 TRMT2AQ8IZ69 625 aaKnown RBP6.69□□□□□ -1.34
PDCD4-204ENST00000462577 ARXQ96QS3 562 aa6.69□□□□□ -1.34
PDCD4-204ENST00000462577 MYH16Q9H6N6 1097 aa6.69□□□□□ -1.34
PDCD4-204ENST00000462577 LAS1LQ9Y4W2 734 aaKnown RBP6.69□□□□□ -1.34
PDCD4-204ENST00000462577 MYH13Q9UKX3 1938 aa6.69□□□□□ -1.34
PDCD4-204ENST00000462577 CARMIL3Q8ND23 1372 aa6.69□□□□□ -1.34
PDCD4-204ENST00000462577 E9PSI1 815 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 ST8SIA5O15466 376 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 ALDH1A1P00352 501 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 SLFN5Q08AF3 891 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 HDGFL1Q5TGJ6 251 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 DZIP3Q86Y13 1208 aaKnown RBP6.68□□□□□ -1.34
PDCD4-204ENST00000462577 C8orf58Q8NAV2 365 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 LRRN4Q8WUT4 740 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 TSR2Q969E8 191 aaKnown RBP6.68□□□□□ -1.34
PDCD4-204ENST00000462577 PCMTD1Q96MG8 357 aaPredicted RBP6.68□□□□□ -1.34
PDCD4-204ENST00000462577 GOPCQ9HD26 462 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 DBF4Q9UBU7 674 aaPredicted RBP6.68□□□□□ -1.34
PDCD4-204ENST00000462577 SRP68Q9UHB9 627 aaKnown RBP6.68□□□□□ -1.34
PDCD4-204ENST00000462577 ZNF652Q9Y2D9 606 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 CD2APQ9Y5K6 639 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 ZNF646O15015 1829 aaPredicted RBP6.68□□□□□ -1.34
PDCD4-204ENST00000462577 MAP3K15Q6ZN16 1313 aa6.68□□□□□ -1.34
PDCD4-204ENST00000462577 POLRMTO00411 1230 aaKnown RBP6.67□□□□□ -1.34
PDCD4-204ENST00000462577 AP1G2O75843 785 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 MMP10P09238 476 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 DDR1Q08345 913 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 PROSER3Q2NL68 480 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 TWISTNBQ3B726 338 aaPredicted RBP6.67□□□□□ -1.34
PDCD4-204ENST00000462577 CCDC30Q5VVM6 783 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 MSL1Q68DK7 614 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 KIF6Q6ZMV9 814 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 NPM2Q86SE8 214 aaKnown RBP6.67□□□□□ -1.34
PDCD4-204ENST00000462577 FOXJ1Q92949 421 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 ZNF428Q96B54 188 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 AAASQ9NRG9 546 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 HYPKQ9NX55 129 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 CHPF2Q9P2E5 772 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 PPP1R1BQ9UD71 204 aaPredicted RBP6.67□□□□□ -1.34
PDCD4-204ENST00000462577 TBC1D2BQ9UPU7 963 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 ZBED9Q6R2W3 1325 aa6.67□□□□□ -1.34
PDCD4-204ENST00000462577 VAMP4O75379 141 aa6.66□□□□□ -1.34
PDCD4-204ENST00000462577 AVPP01185 164 aa6.66□□□□□ -1.34
PDCD4-204ENST00000462577 CT47B1P0C2W7 299 aaPredicted RBP6.66□□□□□ -1.34
PDCD4-204ENST00000462577 EIF2S2P20042 333 aaKnown RBP6.66□□□□□ -1.34
PDCD4-204ENST00000462577 VARSP26640 1264 aaKnown RBP6.66□□□□□ -1.34
PDCD4-204ENST00000462577 RFC5P40937 340 aa6.66□□□□□ -1.34
PDCD4-204ENST00000462577 PIP4K2AP48426 406 aaPredicted RBP6.66□□□□□ -1.34
PDCD4-204ENST00000462577 EXOSC9Q06265 439 aaKnown RBP6.66□□□□□ -1.34
PDCD4-204ENST00000462577 NFIXQ14938 502 aa6.66□□□□□ -1.34
PDCD4-204ENST00000462577 TSPYL6Q8N831 410 aa6.66□□□□□ -1.34
PDCD4-204ENST00000462577 HPS1Q92902 700 aa6.66□□□□□ -1.34
PDCD4-204ENST00000462577 FHDC1Q9C0D6 1143 aaPredicted RBP6.66□□□□□ -1.34
PDCD4-204ENST00000462577 DACH1Q9UI36 760 aa6.66□□□□□ -1.34
PDCD4-204ENST00000462577 PARP3Q9Y6F1 533 aa6.66□□□□□ -1.34
PDCD4-204ENST00000462577 RNF123Q5XPI4 1314 aa6.66□□□□□ -1.34
PDCD4-204ENST00000462577 MYL6BP14649 208 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 AGERQ15109 404 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 NR6A1Q15406 480 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 HSP90AB3PQ58FF7 597 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 TBC1D9BQ66K14 1250 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 TTLL7Q6ZT98 887 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 ZNF34Q8IZ26 560 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 PLBD2Q8NHP8 589 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 SYT17Q9BSW7 474 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 TLL2Q9Y6L7 1015 aa6.65□□□□□ -1.34
PDCD4-204ENST00000462577 ADCY9O60503 1353 aa6.65□□□□□ -1.35
PDCD4-204ENST00000462577 ARAP2Q8WZ64 1704 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 SENP3-EIF4A1A0A087X0R7 540 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 AXIN1O15169 862 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 ANXA1P04083 346 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 SERPINB2P05120 415 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 TGFB2P61812 414 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 HLFQ16534 295 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 PARP10Q53GL7 1025 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 C4orf48Q5BLP8 95 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 ZNF787Q6DD87 383 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 COPS6Q7L5N1 327 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 ARMC2Q8NEN0 867 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 XAGE3Q8WTP9 111 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 SETDB2Q96T68 719 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 STK31Q9BXU1 1019 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 ZNF330Q9Y3S2 320 aaPredicted RBP6.64□□□□□ -1.35
PDCD4-204ENST00000462577 UBN2Q6ZU65 1347 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 ECM29Q5VYK3 1845 aa6.64□□□□□ -1.35
PDCD4-204ENST00000462577 POTECB2RU33 542 aa6.63□□□□□ -1.35
PDCD4-204ENST00000462577 ELL2O00472 640 aaPredicted RBP6.63□□□□□ -1.35
PDCD4-204ENST00000462577 DDX58O95786 925 aaKnown RBP6.63□□□□□ -1.35
PDCD4-204ENST00000462577 COL4A1P02462 1669 aa6.63□□□□□ -1.35
PDCD4-204ENST00000462577 SCN4AP35499 1836 aa6.63□□□□□ -1.35
PDCD4-204ENST00000462577 HNRNPUQ00839 825 aaKnown RBP eCLIP6.63□□□□□ -1.35
PDCD4-204ENST00000462577 TRIM28Q13263 835 aaKnown RBP6.63□□□□□ -1.35
PDCD4-204ENST00000462577 TCIRG1Q13488 830 aa6.63□□□□□ -1.35
PDCD4-204ENST00000462577 CTC1Q2NKJ3 1217 aa6.63□□□□□ -1.35
PDCD4-204ENST00000462577 ALDH1L2Q3SY69 923 aa6.63□□□□□ -1.35
PDCD4-204ENST00000462577 PRR5LQ6MZQ0 368 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms