RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 FKBP4Q02790 459 aaKnown RBP eCLIP14.61□□□□□ -0.07
RAE1-207ENST00000462438 TTF1Q15361 905 aaPredicted RBP14.61□□□□□ -0.07
RAE1-207ENST00000462438 TTC39AQ5SRH9 613 aa14.61□□□□□ -0.07
RAE1-207ENST00000462438 TDRD7Q8NHU6 1098 aaKnown RBP14.61□□□□□ -0.07
RAE1-207ENST00000462438 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
RAE1-207ENST00000462438 POLLQ9UGP5 575 aa14.61□□□□□ -0.07
RAE1-207ENST00000462438 UFL1O94874 794 aa14.61□□□□□ -0.07
RAE1-207ENST00000462438 CNTROBQ8N137 903 aa14.61□□□□□ -0.07
RAE1-207ENST00000462438 FAM205AQ6ZU69 1335 aa14.61□□□□□ -0.07
RAE1-207ENST00000462438 HIP1O00291 1037 aa14.61□□□□□ -0.07
RAE1-207ENST00000462438 EPB41L2O43491 1005 aaKnown RBP14.61□□□□□ -0.07
RAE1-207ENST00000462438 HIBADHP31937 336 aaKnown RBP14.61□□□□□ -0.07
RAE1-207ENST00000462438 HELBQ8NG08 1087 aaPredicted RBP14.61□□□□□ -0.07
RAE1-207ENST00000462438 KIAA2012Q0VF49 1180 aa14.6□□□□□ -0.07
RAE1-207ENST00000462438 LRRFIP1Q32MZ4 808 aaKnown RBP14.6□□□□□ -0.07
RAE1-207ENST00000462438 SNRKQ9NRH2 765 aa14.6□□□□□ -0.07
RAE1-207ENST00000462438 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
RAE1-207ENST00000462438 SUGT1Q9Y2Z0 365 aa14.6□□□□□ -0.07
RAE1-207ENST00000462438 COL1A1P02452 1464 aaPredicted RBP14.6□□□□□ -0.07
RAE1-207ENST00000462438 GORABQ5T7V8 394 aa14.6□□□□□ -0.07
RAE1-207ENST00000462438 PHKA1P46020 1223 aa14.59□□□□□ -0.07
RAE1-207ENST00000462438 MMP14P50281 582 aa14.59□□□□□ -0.07
RAE1-207ENST00000462438 ZGPATQ8N5A5 531 aaKnown RBP14.59□□□□□ -0.07
RAE1-207ENST00000462438 SBF1O95248 1867 aa14.59□□□□□ -0.07
RAE1-207ENST00000462438 SDSP20132 328 aa14.58□□□□□ -0.07
RAE1-207ENST00000462438 PODNQ7Z5L7 613 aa14.58□□□□□ -0.07
RAE1-207ENST00000462438 FHDC1Q9C0D6 1143 aaPredicted RBP14.58□□□□□ -0.07
RAE1-207ENST00000462438 SLKQ9H2G2 1235 aaPredicted RBP14.58□□□□□ -0.07
RAE1-207ENST00000462438 RAD50Q92878 1312 aa14.58□□□□□ -0.08
RAE1-207ENST00000462438 MCAMP43121 646 aa14.58□□□□□ -0.08
RAE1-207ENST00000462438 KBTBD3Q8NAB2 608 aa14.58□□□□□ -0.08
RAE1-207ENST00000462438 SPATA5Q8NB90 893 aa14.58□□□□□ -0.08
RAE1-207ENST00000462438 CHD4Q14839 1912 aa14.58□□□□□ -0.08
RAE1-207ENST00000462438 ZFYP08048 801 aaPredicted RBP14.58□□□□□ -0.08
RAE1-207ENST00000462438 DDRGK1Q96HY6 314 aa14.58□□□□□ -0.08
RAE1-207ENST00000462438 PAG1Q9NWQ8 432 aa14.58□□□□□ -0.08
RAE1-207ENST00000462438 HMG20BQ9P0W2 317 aa14.58□□□□□ -0.08
RAE1-207ENST00000462438 CDC45O75419 566 aa14.57□□□□□ -0.08
RAE1-207ENST00000462438 SYT17Q9BSW7 474 aa14.57□□□□□ -0.08
RAE1-207ENST00000462438 RASGRF1Q13972 1273 aa14.57□□□□□ -0.08
RAE1-207ENST00000462438 WDR66Q8TBY9 1149 aa14.57□□□□□ -0.08
RAE1-207ENST00000462438 TBC1D22AQ8WUA7 517 aa14.57□□□□□ -0.08
RAE1-207ENST00000462438 ZNF830Q96NB3 372 aaPredicted RBP14.57□□□□□ -0.08
RAE1-207ENST00000462438 CD209Q9NNX6 404 aa14.57□□□□□ -0.08
RAE1-207ENST00000462438 BCAMP50895 628 aa14.56□□□□□ -0.08
RAE1-207ENST00000462438 NLGN2Q8NFZ4 835 aa14.56□□□□□ -0.08
RAE1-207ENST00000462438 ZC3H12CQ9C0D7 883 aaKnown RBP14.56□□□□□ -0.08
RAE1-207ENST00000462438 WASHC4Q2M389 1173 aa14.56□□□□□ -0.08
RAE1-207ENST00000462438 ZSCAN25Q6NSZ9 544 aa14.56□□□□□ -0.08
RAE1-207ENST00000462438 PDCL3Q9H2J4 239 aa14.56□□□□□ -0.08
RAE1-207ENST00000462438 MYO5AQ9Y4I1 1855 aaKnown RBP14.56□□□□□ -0.08
RAE1-207ENST00000462438 C21orf2O43822 256 aa14.56□□□□□ -0.08
RAE1-207ENST00000462438 ZFP91Q96JP5 570 aaPredicted RBP14.56□□□□□ -0.08
RAE1-207ENST00000462438 KLRK1P26718 216 aa14.55□□□□□ -0.08
RAE1-207ENST00000462438 GYG1P46976 350 aa14.55□□□□□ -0.08
RAE1-207ENST00000462438 C6orf229H3BNL8 230 aa14.55□□□□□ -0.08
RAE1-207ENST00000462438 SPTY2D1Q68D10 685 aaPredicted RBP14.55□□□□□ -0.08
RAE1-207ENST00000462438 VPS37DQ86XT2 251 aa14.55□□□□□ -0.08
RAE1-207ENST00000462438 BOLA2Q9H3K6 86 aa14.55□□□□□ -0.08
RAE1-207ENST00000462438 SCN9AQ15858 1988 aa14.55□□□□□ -0.08
RAE1-207ENST00000462438 TIAM2Q8IVF5 1701 aa14.55□□□□□ -0.08
RAE1-207ENST00000462438 TXNRD3Q86VQ6 643 aa14.54□□□□□ -0.08
RAE1-207ENST00000462438 ANP32BQ92688 251 aaKnown RBP14.54□□□□□ -0.08
RAE1-207ENST00000462438 TAOK3Q9H2K8 898 aa14.54□□□□□ -0.08
RAE1-207ENST00000462438 PPP1R1BQ9UD71 204 aaPredicted RBP14.54□□□□□ -0.08
RAE1-207ENST00000462438 SCARF1Q14162 830 aa14.54□□□□□ -0.08
RAE1-207ENST00000462438 C8orf34Q49A92 452 aa14.54□□□□□ -0.08
RAE1-207ENST00000462438 CASC1Q6TDU7 716 aa14.54□□□□□ -0.08
RAE1-207ENST00000462438 CERS3Q8IU89 383 aa14.54□□□□□ -0.08
RAE1-207ENST00000462438 MRIQ9BWK5 157 aa14.54□□□□□ -0.08
RAE1-207ENST00000462438 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.54□□□□□ -0.08
RAE1-207ENST00000462438 CYP2E1P05181 493 aaPredicted RBP14.54□□□□□ -0.08
RAE1-207ENST00000462438 UBE3CQ15386 1083 aa14.54□□□□□ -0.08
RAE1-207ENST00000462438 ZC3H4Q9UPT8 1303 aaKnown RBP14.54□□□□□ -0.08
RAE1-207ENST00000462438 SNAP23O00161 211 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 NFKBIEO00221 500 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 COL4A5P29400 1685 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 MYO3BQ8WXR4 1341 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 IARSP41252 1262 aaKnown RBP14.53□□□□□ -0.08
RAE1-207ENST00000462438 ZAP70P43403 619 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 SPRYD3Q8NCJ5 442 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 FOCADQ5VW36 1801 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 CHMLP26374 656 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 STRIP1Q5VSL9 837 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 TSHZ3Q63HK5 1081 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 HELLSQ9NRZ9 838 aa14.53□□□□□ -0.08
RAE1-207ENST00000462438 RUFY2Q8WXA3 655 aa14.52□□□□□ -0.08
RAE1-207ENST00000462438 RPAP1Q9BWH6 1393 aaPredicted RBP14.52□□□□□ -0.09
RAE1-207ENST00000462438 WTIPA6NIX2 430 aaPredicted RBP14.52□□□□□ -0.09
RAE1-207ENST00000462438 MAP4K4O95819 1239 aaPredicted RBP14.52□□□□□ -0.09
RAE1-207ENST00000462438 BACH2Q9BYV9 841 aa14.52□□□□□ -0.09
RAE1-207ENST00000462438 OLFM4Q6UX06 510 aa14.51□□□□□ -0.09
RAE1-207ENST00000462438 SLC51AQ86UW1 340 aa14.51□□□□□ -0.09
RAE1-207ENST00000462438 MAST3O60307 1309 aa14.51□□□□□ -0.09
RAE1-207ENST00000462438 HDLBPQ00341 1268 aaKnown RBP14.51□□□□□ -0.09
RAE1-207ENST00000462438 MAP3K12Q12852 859 aa14.51□□□□□ -0.09
RAE1-207ENST00000462438 FAM163AQ96GL9 167 aaPredicted RBP14.51□□□□□ -0.09
RAE1-207ENST00000462438 TRIM6-TRIM34B2RNG4 842 aa14.51□□□□□ -0.09
RAE1-207ENST00000462438 RNF113AO15541 343 aaKnown RBP14.51□□□□□ -0.09
RAE1-207ENST00000462438 CLCN1P35523 988 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 1214.8 ms