RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 TAF1CQ15572 869 aaPredicted RBP19.71■□□□□ 0.75
APP-211ENST00000462267 OPTNQ96CV9 577 aa19.71■□□□□ 0.75
APP-211ENST00000462267 ANKRD2Q9GZV1 360 aa19.71■□□□□ 0.75
APP-211ENST00000462267 TRIM35Q9UPQ4 493 aa19.71■□□□□ 0.75
APP-211ENST00000462267 SPDYE2BA6NHP3 402 aa19.7■□□□□ 0.74
APP-211ENST00000462267 MYCP01106 439 aaPredicted RBP19.7■□□□□ 0.74
APP-211ENST00000462267 SPDYE6P0CI01 402 aa19.7■□□□□ 0.74
APP-211ENST00000462267 DPF3Q92784 378 aa19.7■□□□□ 0.74
APP-211ENST00000462267 CUL9Q8IWT3 2517 aa19.69■□□□□ 0.74
APP-211ENST00000462267 CLRN2A0PK11 232 aa19.69■□□□□ 0.74
APP-211ENST00000462267 DDX58O95786 925 aaKnown RBP19.69■□□□□ 0.74
APP-211ENST00000462267 KLRK1P26718 216 aa19.69■□□□□ 0.74
APP-211ENST00000462267 IGHMBP2P38935 993 aaKnown RBP19.69■□□□□ 0.74
APP-211ENST00000462267 SH3TC2Q8TF17 1288 aa19.69■□□□□ 0.74
APP-211ENST00000462267 BRI3BPQ8WY22 251 aa19.69■□□□□ 0.74
APP-211ENST00000462267 ELP3Q9H9T3 547 aa19.69■□□□□ 0.74
APP-211ENST00000462267 VEZTQ9HBM0 779 aa19.69■□□□□ 0.74
APP-211ENST00000462267 CD209Q9NNX6 404 aa19.69■□□□□ 0.74
APP-211ENST00000462267 A0A0C4DFX4 3053 aa19.69■□□□□ 0.74
APP-211ENST00000462267 WDHD1O75717 1129 aaPredicted RBP19.68■□□□□ 0.74
APP-211ENST00000462267 GNRH1P01148 92 aa19.68■□□□□ 0.74
APP-211ENST00000462267 GTF2A2P52657 109 aa19.68■□□□□ 0.74
APP-211ENST00000462267 RASA3Q14644 834 aa19.68■□□□□ 0.74
APP-211ENST00000462267 KIF22Q14807 665 aa19.68■□□□□ 0.74
APP-211ENST00000462267 CFAP100Q494V2 611 aa19.68■□□□□ 0.74
APP-211ENST00000462267 CERS5Q8N5B7 392 aa19.68■□□□□ 0.74
APP-211ENST00000462267 PRMT6Q96LA8 375 aaPredicted RBP19.68■□□□□ 0.74
APP-211ENST00000462267 PRO3102Q9H379 93 aa19.68■□□□□ 0.74
APP-211ENST00000462267 CCL15-CCL14A0A0B4J2E2 113 aa19.67■□□□□ 0.74
APP-211ENST00000462267 PRMT2P55345 433 aa19.67■□□□□ 0.74
APP-211ENST00000462267 CCL15Q16663 113 aa19.67■□□□□ 0.74
APP-211ENST00000462267 PCDHAC2Q9Y5I4 1007 aa19.67■□□□□ 0.74
APP-211ENST00000462267 KCNJ4P48050 445 aa19.66■□□□□ 0.74
APP-211ENST00000462267 TNFAIP1Q13829 316 aa19.66■□□□□ 0.74
APP-211ENST00000462267 NKX2-3Q8TAU0 364 aa19.66■□□□□ 0.74
APP-211ENST00000462267 MBIPQ9NS73 344 aa19.66■□□□□ 0.74
APP-211ENST00000462267 FKBP1AP62942 108 aaKnown RBP19.65■□□□□ 0.74
APP-211ENST00000462267 LACTBP83111 547 aaPredicted RBP19.65■□□□□ 0.74
APP-211ENST00000462267 FAM43AQ8N2R8 423 aa19.65■□□□□ 0.74
APP-211ENST00000462267 SHISA4Q96DD7 197 aa19.65■□□□□ 0.74
APP-211ENST00000462267 HTATIP2Q9BUP3 242 aa19.65■□□□□ 0.74
APP-211ENST00000462267 ECM29Q5VYK3 1845 aa19.65■□□□□ 0.74
APP-211ENST00000462267 F8W031 263 aaPredicted RBP19.64■□□□□ 0.73
APP-211ENST00000462267 TLR2O60603 784 aa19.64■□□□□ 0.73
APP-211ENST00000462267 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.64■□□□□ 0.73
APP-211ENST00000462267 CCDC146Q8IYE0 955 aa19.64■□□□□ 0.73
APP-211ENST00000462267 MPHOSPH8Q99549 860 aa19.64■□□□□ 0.73
APP-211ENST00000462267 ZCCHC17Q9NP64 241 aaKnown RBP19.64■□□□□ 0.73
APP-211ENST00000462267 MAP3K2Q9Y2U5 619 aa19.64■□□□□ 0.73
APP-211ENST00000462267 NR2E3Q9Y5X4 410 aa19.64■□□□□ 0.73
APP-211ENST00000462267 SPEF2Q9C093 1822 aa19.63■□□□□ 0.73
APP-211ENST00000462267 A0A1W2PPC1 479 aa19.63■□□□□ 0.73
APP-211ENST00000462267 IGKV5-2P06315 115 aa19.63■□□□□ 0.73
APP-211ENST00000462267 C15orf52Q6ZUT6 534 aaKnown RBP19.63■□□□□ 0.73
APP-211ENST00000462267 RUNDC1Q96C34 613 aa19.63■□□□□ 0.73
APP-211ENST00000462267 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
APP-211ENST00000462267 ARHGAP39Q9C0H5 1083 aa19.63■□□□□ 0.73
APP-211ENST00000462267 AOX1Q06278 1338 aa19.62■□□□□ 0.73
APP-211ENST00000462267 ITGA6P23229 1130 aa19.62■□□□□ 0.73
APP-211ENST00000462267 MNX1P50219 401 aaPredicted RBP19.62■□□□□ 0.73
APP-211ENST00000462267 RBM5P52756 815 aaKnown RBP eCLIP19.62■□□□□ 0.73
APP-211ENST00000462267 MAP3K9P80192 1104 aa19.62■□□□□ 0.73
APP-211ENST00000462267 UBE2Q1Q7Z7E8 422 aa19.62■□□□□ 0.73
APP-211ENST00000462267 CNKSR2Q8WXI2 1034 aa19.62■□□□□ 0.73
APP-211ENST00000462267 COL6A3P12111 3177 aa19.62■□□□□ 0.73
APP-211ENST00000462267 MYH3P11055 1940 aa19.61■□□□□ 0.73
APP-211ENST00000462267 ZNF853P0CG23 659 aa19.61■□□□□ 0.73
APP-211ENST00000462267 IL1R1P14778 569 aa19.61■□□□□ 0.73
APP-211ENST00000462267 CHRNDQ07001 517 aa19.61■□□□□ 0.73
APP-211ENST00000462267 NEXNQ0ZGT2 675 aa19.61■□□□□ 0.73
APP-211ENST00000462267 VGLL4Q14135 290 aa19.61■□□□□ 0.73
APP-211ENST00000462267 MTFR1Q15390 333 aa19.61■□□□□ 0.73
APP-211ENST00000462267 KSR2Q6VAB6 950 aa19.61■□□□□ 0.73
APP-211ENST00000462267 CSADQ9Y600 493 aa19.61■□□□□ 0.73
APP-211ENST00000462267 IRS2Q9Y4H2 1338 aa19.6■□□□□ 0.73
APP-211ENST00000462267 ELL2O00472 640 aaPredicted RBP19.6■□□□□ 0.73
APP-211ENST00000462267 GJA8P48165 433 aa19.6■□□□□ 0.73
APP-211ENST00000462267 SPDYE2Q495Y8 402 aa19.6■□□□□ 0.73
APP-211ENST00000462267 PLA2G12BQ9BX93 195 aa19.6■□□□□ 0.73
APP-211ENST00000462267 OTOFQ9HC10 1997 aa19.59■□□□□ 0.73
APP-211ENST00000462267 PI4KAP2A4QPH2 592 aa19.59■□□□□ 0.73
APP-211ENST00000462267 H7C1W4 665 aa19.59■□□□□ 0.73
APP-211ENST00000462267 GJB1P08034 283 aa19.59■□□□□ 0.73
APP-211ENST00000462267 CETPP11597 493 aa19.59■□□□□ 0.73
APP-211ENST00000462267 CCDC30Q5VVM6 783 aa19.59■□□□□ 0.73
APP-211ENST00000462267 ZNF804AQ7Z570 1209 aa19.59■□□□□ 0.73
APP-211ENST00000462267 PI4KAP1Q8N8J0 262 aa19.59■□□□□ 0.73
APP-211ENST00000462267 HELBQ8NG08 1087 aaPredicted RBP19.59■□□□□ 0.73
APP-211ENST00000462267 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.59■□□□□ 0.73
APP-211ENST00000462267 TEPSINQ96N21 525 aa19.59■□□□□ 0.73
APP-211ENST00000462267 ZNF70Q9UC06 446 aaPredicted RBP19.59■□□□□ 0.73
APP-211ENST00000462267 NEURL1BA8MQ27 555 aa19.58■□□□□ 0.72
APP-211ENST00000462267 ZBTB7BO15156 539 aaPredicted RBP19.58■□□□□ 0.72
APP-211ENST00000462267 HOXD10P28358 340 aa19.58■□□□□ 0.72
APP-211ENST00000462267 UBE3BQ7Z3V4 1068 aa19.58■□□□□ 0.72
APP-211ENST00000462267 SRRDQ9UH36 339 aa19.58■□□□□ 0.72
APP-211ENST00000462267 SPDYE5A6NIY4 337 aa19.57■□□□□ 0.72
APP-211ENST00000462267 CSF1RP07333 972 aa19.57■□□□□ 0.72
APP-211ENST00000462267 RALBP1Q15311 655 aa19.57■□□□□ 0.72
APP-211ENST00000462267 CWF19L2Q2TBE0 894 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms