RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 VEZTQ9HBM0 779 aa16.44■□□□□ 0.22
C9orf78-202ENST00000461349 RBM27Q9P2N5 1060 aaKnown RBP16.44■□□□□ 0.22
C9orf78-202ENST00000461349 ZSWIM8A7E2V4 1837 aa16.44■□□□□ 0.22
C9orf78-202ENST00000461349 USP2O75604 605 aaPredicted RBP16.43■□□□□ 0.22
C9orf78-202ENST00000461349 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
C9orf78-202ENST00000461349 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
C9orf78-202ENST00000461349 KCNJ4P48050 445 aa16.43■□□□□ 0.22
C9orf78-202ENST00000461349 KIF22Q14807 665 aa16.43■□□□□ 0.22
C9orf78-202ENST00000461349 NBPF12Q5TAG4 269 aaPredicted RBP16.43■□□□□ 0.22
C9orf78-202ENST00000461349 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
C9orf78-202ENST00000461349 OPTNQ96CV9 577 aa16.43■□□□□ 0.22
C9orf78-202ENST00000461349 ANKRD2Q9GZV1 360 aa16.43■□□□□ 0.22
C9orf78-202ENST00000461349 GREM2Q9H772 168 aa16.43■□□□□ 0.22
C9orf78-202ENST00000461349 CLRN2A0PK11 232 aa16.42■□□□□ 0.22
C9orf78-202ENST00000461349 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
C9orf78-202ENST00000461349 METTL22Q9BUU2 404 aaPredicted RBP16.42■□□□□ 0.22
C9orf78-202ENST00000461349 ELP3Q9H9T3 547 aa16.42■□□□□ 0.22
C9orf78-202ENST00000461349 CCL15-CCL14A0A0B4J2E2 113 aa16.41■□□□□ 0.22
C9orf78-202ENST00000461349 CCL15Q16663 113 aa16.41■□□□□ 0.22
C9orf78-202ENST00000461349 CFAP100Q494V2 611 aa16.41■□□□□ 0.22
C9orf78-202ENST00000461349 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
C9orf78-202ENST00000461349 F8W031 263 aaPredicted RBP16.4■□□□□ 0.22
C9orf78-202ENST00000461349 GNRH1P01148 92 aa16.4■□□□□ 0.22
C9orf78-202ENST00000461349 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
C9orf78-202ENST00000461349 GTF2A2P52657 109 aa16.4■□□□□ 0.22
C9orf78-202ENST00000461349 HTATIP2Q9BUP3 242 aa16.4■□□□□ 0.22
C9orf78-202ENST00000461349 A0A1B0GUL6 1792 aa16.4■□□□□ 0.22
C9orf78-202ENST00000461349 ARAP2Q8WZ64 1704 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 KLRK1P26718 216 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 RBM5P52756 815 aaKnown RBP eCLIP16.39■□□□□ 0.21
C9orf78-202ENST00000461349 PRMT2P55345 433 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 TNFAIP1Q13829 316 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 RASA3Q14644 834 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 CCDC146Q8IYE0 955 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 NKX2-3Q8TAU0 364 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 BRI3BPQ8WY22 251 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 MS4A4AQ96JQ5 239 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 MPHOSPH8Q99549 860 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 CD209Q9NNX6 404 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 TRIM35Q9UPQ4 493 aa16.39■□□□□ 0.21
C9orf78-202ENST00000461349 RANBP2P49792 3224 aaKnown RBP16.38■□□□□ 0.21
C9orf78-202ENST00000461349 CERS5Q8N5B7 392 aa16.38■□□□□ 0.21
C9orf78-202ENST00000461349 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
C9orf78-202ENST00000461349 PCDHAC2Q9Y5I4 1007 aa16.38■□□□□ 0.21
C9orf78-202ENST00000461349 NR2E3Q9Y5X4 410 aa16.38■□□□□ 0.21
C9orf78-202ENST00000461349 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
C9orf78-202ENST00000461349 NEXNQ0ZGT2 675 aa16.37■□□□□ 0.21
C9orf78-202ENST00000461349 CHMP4AQ9BY43 222 aa16.37■□□□□ 0.21
C9orf78-202ENST00000461349 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
C9orf78-202ENST00000461349 MAP3K2Q9Y2U5 619 aa16.37■□□□□ 0.21
C9orf78-202ENST00000461349 CSADQ9Y600 493 aa16.37■□□□□ 0.21
C9orf78-202ENST00000461349 ELL2O00472 640 aaPredicted RBP16.36■□□□□ 0.21
C9orf78-202ENST00000461349 TLR2O60603 784 aa16.36■□□□□ 0.21
C9orf78-202ENST00000461349 FAM43AQ8N2R8 423 aa16.36■□□□□ 0.21
C9orf78-202ENST00000461349 RUNDC1Q96C34 613 aa16.36■□□□□ 0.21
C9orf78-202ENST00000461349 COL6A3P12111 3177 aa16.35■□□□□ 0.21
C9orf78-202ENST00000461349 A0A1W2PPC1 479 aa16.35■□□□□ 0.21
C9orf78-202ENST00000461349 ITGA6P23229 1130 aa16.35■□□□□ 0.21
C9orf78-202ENST00000461349 FKBP1AP62942 108 aaKnown RBP16.35■□□□□ 0.21
C9orf78-202ENST00000461349 ZNF804AQ7Z570 1209 aa16.35■□□□□ 0.21
C9orf78-202ENST00000461349 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
C9orf78-202ENST00000461349 ARHGAP39Q9C0H5 1083 aa16.35■□□□□ 0.21
C9orf78-202ENST00000461349 MNX1P50219 401 aaPredicted RBP16.34■□□□□ 0.21
C9orf78-202ENST00000461349 MAP3K9P80192 1104 aa16.34■□□□□ 0.21
C9orf78-202ENST00000461349 CHRNDQ07001 517 aa16.34■□□□□ 0.21
C9orf78-202ENST00000461349 VGLL4Q14135 290 aa16.34■□□□□ 0.21
C9orf78-202ENST00000461349 MTFR1Q15390 333 aa16.34■□□□□ 0.21
C9orf78-202ENST00000461349 KSR2Q6VAB6 950 aa16.34■□□□□ 0.21
C9orf78-202ENST00000461349 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.34■□□□□ 0.21
C9orf78-202ENST00000461349 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
C9orf78-202ENST00000461349 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
C9orf78-202ENST00000461349 ZCCHC17Q9NP64 241 aaKnown RBP16.34■□□□□ 0.21
C9orf78-202ENST00000461349 MGAMO43451 1857 aa16.33■□□□□ 0.21
C9orf78-202ENST00000461349 IGKV5-2P06315 115 aa16.33■□□□□ 0.2
C9orf78-202ENST00000461349 CETPP11597 493 aa16.33■□□□□ 0.2
C9orf78-202ENST00000461349 TNNI2P48788 182 aa16.33■□□□□ 0.2
C9orf78-202ENST00000461349 CCDC30Q5VVM6 783 aa16.33■□□□□ 0.2
C9orf78-202ENST00000461349 PRO3102Q9H379 93 aa16.33■□□□□ 0.2
C9orf78-202ENST00000461349 CUL9Q8IWT3 2517 aa16.33■□□□□ 0.2
C9orf78-202ENST00000461349 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
C9orf78-202ENST00000461349 IL1R1P14778 569 aa16.32■□□□□ 0.2
C9orf78-202ENST00000461349 HOXD10P28358 340 aa16.32■□□□□ 0.2
C9orf78-202ENST00000461349 GJA8P48165 433 aa16.32■□□□□ 0.2
C9orf78-202ENST00000461349 AOX1Q06278 1338 aa16.32■□□□□ 0.2
C9orf78-202ENST00000461349 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
C9orf78-202ENST00000461349 CWF19L2Q2TBE0 894 aaKnown RBP16.32■□□□□ 0.2
C9orf78-202ENST00000461349 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
C9orf78-202ENST00000461349 C15orf52Q6ZUT6 534 aaKnown RBP16.32■□□□□ 0.2
C9orf78-202ENST00000461349 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
C9orf78-202ENST00000461349 HELBQ8NG08 1087 aaPredicted RBP16.32■□□□□ 0.2
C9orf78-202ENST00000461349 RAET1EQ8TD07 263 aa16.32■□□□□ 0.2
C9orf78-202ENST00000461349 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
C9orf78-202ENST00000461349 ECM2O94769 699 aaPredicted RBP16.31■□□□□ 0.2
C9orf78-202ENST00000461349 GJB1P08034 283 aa16.31■□□□□ 0.2
C9orf78-202ENST00000461349 GRK4P32298 578 aa16.31■□□□□ 0.2
C9orf78-202ENST00000461349 GNAI1P63096 354 aa16.31■□□□□ 0.2
C9orf78-202ENST00000461349 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.2
C9orf78-202ENST00000461349 BIN2Q9UBW5 565 aaPredicted RBP16.31■□□□□ 0.2
C9orf78-202ENST00000461349 SPDYE5A6NIY4 337 aa16.3■□□□□ 0.2
C9orf78-202ENST00000461349 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms