RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 USP17L8P0C7I0 530 aa20.04■□□□□ 0.8
SHANK1-205ENST00000461154 HIRAP54198 1017 aaPredicted RBP20.04■□□□□ 0.8
SHANK1-205ENST00000461154 SAMD7Q7Z3H4 446 aa20.04■□□□□ 0.8
SHANK1-205ENST00000461154 TRPM4Q8TD43 1214 aa20.04■□□□□ 0.8
SHANK1-205ENST00000461154 A0A1B0GUL7 405 aa20.03■□□□□ 0.8
SHANK1-205ENST00000461154 FRAT2O75474 233 aaPredicted RBP20.03■□□□□ 0.8
SHANK1-205ENST00000461154 MMP14P50281 582 aa20.03■□□□□ 0.8
SHANK1-205ENST00000461154 ZNF280AP59817 542 aaPredicted RBP20.03■□□□□ 0.8
SHANK1-205ENST00000461154 GTF2IP78347 998 aa20.03■□□□□ 0.8
SHANK1-205ENST00000461154 TBC1D10BQ4KMP7 808 aaPredicted RBP20.03■□□□□ 0.8
SHANK1-205ENST00000461154 RBM26Q5T8P6 1007 aaKnown RBP20.03■□□□□ 0.8
SHANK1-205ENST00000461154 TDRD7Q8NHU6 1098 aaKnown RBP20.03■□□□□ 0.8
SHANK1-205ENST00000461154 GPR108Q9NPR9 543 aa20.03■□□□□ 0.8
SHANK1-205ENST00000461154 GNL3LQ9NVN8 582 aaKnown RBP20.03■□□□□ 0.8
SHANK1-205ENST00000461154 EXOC6BQ9Y2D4 811 aa20.03■□□□□ 0.8
SHANK1-205ENST00000461154 BCAMP50895 628 aa20.02■□□□□ 0.8
SHANK1-205ENST00000461154 TIMM10P62072 90 aa20.02■□□□□ 0.8
SHANK1-205ENST00000461154 KIF4BQ2VIQ3 1234 aa20.02■□□□□ 0.8
SHANK1-205ENST00000461154 OGFOD1Q8N543 542 aa20.02■□□□□ 0.8
SHANK1-205ENST00000461154 NEUROD6Q96NK8 337 aa20.02■□□□□ 0.8
SHANK1-205ENST00000461154 CREBZFQ9NS37 354 aa20.02■□□□□ 0.8
SHANK1-205ENST00000461154 HTRA3P83110 453 aa20.01■□□□□ 0.79
SHANK1-205ENST00000461154 ZNF646O15015 1829 aaPredicted RBP20.01■□□□□ 0.79
SHANK1-205ENST00000461154 TMEM88BA6NKF7 163 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 RAB11FIP3O75154 756 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 FKBP1AP62942 108 aaKnown RBP20■□□□□ 0.79
SHANK1-205ENST00000461154 TNNI3KQ59H18 835 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 GORABQ5T7V8 394 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 CDC37L1Q7L3B6 337 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 DNAJC5GQ8N7S2 189 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 KIF1BPQ96EK5 621 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 XAGE2Q96GT9 111 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 FPGT-TNNI3KV9GXZ4 949 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 FAM205AQ6ZU69 1335 aa20■□□□□ 0.79
SHANK1-205ENST00000461154 EGFRP00533 1210 aa19.99■□□□□ 0.79
SHANK1-205ENST00000461154 ADORA1P30542 326 aa19.99■□□□□ 0.79
SHANK1-205ENST00000461154 MXD3Q9BW11 206 aa19.99■□□□□ 0.79
SHANK1-205ENST00000461154 MYOZ2Q9NPC6 264 aa19.99■□□□□ 0.79
SHANK1-205ENST00000461154 HDAC9Q9UKV0 1011 aa19.99■□□□□ 0.79
SHANK1-205ENST00000461154 PCDHB15Q9Y5E8 787 aa19.99■□□□□ 0.79
SHANK1-205ENST00000461154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.99■□□□□ 0.79
SHANK1-205ENST00000461154 MYH13Q9UKX3 1938 aa19.99■□□□□ 0.79
SHANK1-205ENST00000461154 SEMA3EO15041 775 aa19.98■□□□□ 0.79
SHANK1-205ENST00000461154 CCDC102BQ68D86 513 aa19.98■□□□□ 0.79
SHANK1-205ENST00000461154 RHPN1Q8TCX5 695 aa19.98■□□□□ 0.79
SHANK1-205ENST00000461154 TBC1D22AQ8WUA7 517 aa19.98■□□□□ 0.79
SHANK1-205ENST00000461154 DCPSQ96C86 337 aaKnown RBP19.98■□□□□ 0.79
SHANK1-205ENST00000461154 IQSEC3Q9UPP2 1182 aaPredicted RBP19.98■□□□□ 0.79
SHANK1-205ENST00000461154 ZBTB22O15209 634 aa19.97■□□□□ 0.79
SHANK1-205ENST00000461154 PHKA1P46020 1223 aa19.97■□□□□ 0.79
SHANK1-205ENST00000461154 CHAF1AQ13111 956 aaPredicted RBP19.97■□□□□ 0.79
SHANK1-205ENST00000461154 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
SHANK1-205ENST00000461154 KLRG1Q96E93 195 aa19.97■□□□□ 0.79
SHANK1-205ENST00000461154 APBB1O00213 710 aa19.96■□□□□ 0.79
SHANK1-205ENST00000461154 SCARF1Q14162 830 aa19.96■□□□□ 0.79
SHANK1-205ENST00000461154 MFSD14BQ5SR56 506 aa19.96■□□□□ 0.79
SHANK1-205ENST00000461154 KIAA0825Q8IV33 1275 aa19.96■□□□□ 0.79
SHANK1-205ENST00000461154 CLASRPQ8N2M8 674 aaKnown RBP19.96■□□□□ 0.79
SHANK1-205ENST00000461154 GLIS2Q9BZE0 524 aaPredicted RBP19.96■□□□□ 0.79
SHANK1-205ENST00000461154 DENND2AQ9ULE3 1009 aa19.96■□□□□ 0.79
SHANK1-205ENST00000461154 JAG2Q9Y219 1238 aa19.96■□□□□ 0.79
SHANK1-205ENST00000461154 TRAF5O00463 557 aa19.95■□□□□ 0.78
SHANK1-205ENST00000461154 CCDC158Q5M9N0 1113 aa19.95■□□□□ 0.78
SHANK1-205ENST00000461154 KRT26Q7Z3Y9 468 aa19.95■□□□□ 0.78
SHANK1-205ENST00000461154 USP48Q86UV5 1035 aa19.95■□□□□ 0.78
SHANK1-205ENST00000461154 WDR66Q8TBY9 1149 aa19.95■□□□□ 0.78
SHANK1-205ENST00000461154 DCTPP1Q9H773 170 aa19.95■□□□□ 0.78
SHANK1-205ENST00000461154 CENPBP07199 599 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-205ENST00000461154 AACSQ86V21 672 aa19.94■□□□□ 0.78
SHANK1-205ENST00000461154 SULF1Q8IWU6 871 aa19.94■□□□□ 0.78
SHANK1-205ENST00000461154 CERS5Q8N5B7 392 aa19.94■□□□□ 0.78
SHANK1-205ENST00000461154 EAF2Q96CJ1 260 aaPredicted RBP19.94■□□□□ 0.78
SHANK1-205ENST00000461154 LRRCC1Q9C099 1032 aa19.94■□□□□ 0.78
SHANK1-205ENST00000461154 IL1RAPL2Q9NP60 686 aa19.94■□□□□ 0.78
SHANK1-205ENST00000461154 GGA3Q9NZ52 723 aa19.94■□□□□ 0.78
SHANK1-205ENST00000461154 UQCRFS1P1P0C7P4 283 aa19.93■□□□□ 0.78
SHANK1-205ENST00000461154 IRX6P78412 446 aaPredicted RBP19.93■□□□□ 0.78
SHANK1-205ENST00000461154 FMR1Q06787 632 aaKnown RBP eCLIP19.93■□□□□ 0.78
SHANK1-205ENST00000461154 TTC39AQ5SRH9 613 aa19.93■□□□□ 0.78
SHANK1-205ENST00000461154 DBNDD2Q9BQY9 259 aa19.93■□□□□ 0.78
SHANK1-205ENST00000461154 SUGT1Q9Y2Z0 365 aa19.93■□□□□ 0.78
SHANK1-205ENST00000461154 PDS5AQ29RF7 1337 aaKnown RBP19.93■□□□□ 0.78
SHANK1-205ENST00000461154 WNT10BO00744 389 aa19.92■□□□□ 0.78
SHANK1-205ENST00000461154 ARID4AP29374 1257 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-205ENST00000461154 HDAC1Q13547 482 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-205ENST00000461154 ANGEL2Q5VTE6 544 aaKnown RBP19.92■□□□□ 0.78
SHANK1-205ENST00000461154 CST9Q5W186 159 aa19.92■□□□□ 0.78
SHANK1-205ENST00000461154 ZGPATQ8N5A5 531 aaKnown RBP19.92■□□□□ 0.78
SHANK1-205ENST00000461154 CCDC8Q9H0W5 538 aaPredicted RBP19.92■□□□□ 0.78
SHANK1-205ENST00000461154 DBNLQ9UJU6 430 aaKnown RBP19.92■□□□□ 0.78
SHANK1-205ENST00000461154 PITPNM2Q9BZ72 1349 aa19.92■□□□□ 0.78
SHANK1-205ENST00000461154 F8W031 263 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-205ENST00000461154 CELF2O95319 508 aaKnown RBP19.91■□□□□ 0.78
SHANK1-205ENST00000461154 IFIT2P09913 472 aaKnown RBP19.91■□□□□ 0.78
SHANK1-205ENST00000461154 RASGRF1Q13972 1273 aa19.91■□□□□ 0.78
SHANK1-205ENST00000461154 NBPF9Q3BBW0 867 aa19.91■□□□□ 0.78
SHANK1-205ENST00000461154 ABT1Q9ULW3 272 aaKnown RBP19.91■□□□□ 0.78
SHANK1-205ENST00000461154 COL1A1P02452 1464 aaPredicted RBP19.91■□□□□ 0.78
SHANK1-205ENST00000461154 DLGAP5Q15398 846 aa19.9■□□□□ 0.78
SHANK1-205ENST00000461154 DEFB115Q30KQ5 88 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms