RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 BSDC1Q9NW68 430 aaPredicted RBP13□□□□□ -0.33
IFT88-204ENST00000461115 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
IFT88-204ENST00000461115 ZNF804BA4D1E1 1349 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 GNPATO15228 680 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 BRD1O95696 1058 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 SLC5A1P13866 664 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 ZAP70P43403 619 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 ANKRD1Q15327 319 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 ZSCAN25Q6NSZ9 544 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 FBXL16Q8N461 479 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 APPBP2Q92624 585 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 OSBP2Q969R2 916 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 MPHOSPH8Q99549 860 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 LRRC4BQ9NT99 713 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
IFT88-204ENST00000461115 FOXP2O15409 715 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 ZPR1O75312 459 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 CHGBP05060 677 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 CYP21A2P08686 494 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 HSPD1P10809 573 aaKnown RBP12.98□□□□□ -0.33
IFT88-204ENST00000461115 RPS6KB1P23443 525 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 KCNQ4P56696 695 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 AMIGO3Q86WK7 504 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 AGXT2Q9BYV1 514 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 RGPD3A6NKT7 1758 aaPredicted RBP12.98□□□□□ -0.33
IFT88-204ENST00000461115 RGPD4Q7Z3J3 1758 aa12.98□□□□□ -0.33
IFT88-204ENST00000461115 TNRC6CQ9HCJ0 1690 aaKnown RBP12.97□□□□□ -0.33
IFT88-204ENST00000461115 HMGB1P09429 215 aaKnown RBP12.97□□□□□ -0.33
IFT88-204ENST00000461115 PDIA4P13667 645 aaKnown RBP12.97□□□□□ -0.33
IFT88-204ENST00000461115 ADD2P35612 726 aa12.97□□□□□ -0.33
IFT88-204ENST00000461115 PHKA1P46020 1223 aa12.97□□□□□ -0.33
IFT88-204ENST00000461115 KCNJ4P48050 445 aa12.97□□□□□ -0.33
IFT88-204ENST00000461115 FKBP4Q02790 459 aaKnown RBP eCLIP12.97□□□□□ -0.33
IFT88-204ENST00000461115 UBE4AQ14139 1066 aa12.97□□□□□ -0.33
IFT88-204ENST00000461115 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
IFT88-204ENST00000461115 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
IFT88-204ENST00000461115 KRT27Q7Z3Y8 459 aa12.97□□□□□ -0.33
IFT88-204ENST00000461115 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.97□□□□□ -0.33
IFT88-204ENST00000461115 ZMYM6O95789 1325 aa12.97□□□□□ -0.33
IFT88-204ENST00000461115 TCRBV5S4A2TA0A5A2 114 aa12.96□□□□□ -0.33
IFT88-204ENST00000461115 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.33
IFT88-204ENST00000461115 CHRNDQ07001 517 aa12.96□□□□□ -0.33
IFT88-204ENST00000461115 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.33
IFT88-204ENST00000461115 BLOC1S2Q6QNY1 142 aa12.96□□□□□ -0.33
IFT88-204ENST00000461115 CCDC129Q6ZRS4 1044 aa12.96□□□□□ -0.33
IFT88-204ENST00000461115 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
IFT88-204ENST00000461115 TAF6LQ9Y6J9 622 aa12.96□□□□□ -0.33
IFT88-204ENST00000461115 CARMIL3Q8ND23 1372 aa12.96□□□□□ -0.33
IFT88-204ENST00000461115 PDS5AQ29RF7 1337 aaKnown RBP12.96□□□□□ -0.34
IFT88-204ENST00000461115 M0R2C6 588 aa12.96□□□□□ -0.34
IFT88-204ENST00000461115 IGSF3O75054 1194 aa12.96□□□□□ -0.34
IFT88-204ENST00000461115 TM4SF1P30408 202 aa12.96□□□□□ -0.34
IFT88-204ENST00000461115 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.34
IFT88-204ENST00000461115 ANKRD18AQ8IVF6 992 aa12.96□□□□□ -0.34
IFT88-204ENST00000461115 NLRP3Q96P20 1036 aa12.96□□□□□ -0.34
IFT88-204ENST00000461115 NEK1Q96PY6 1258 aa12.96□□□□□ -0.34
IFT88-204ENST00000461115 CTNNA3Q9UI47 895 aa12.96□□□□□ -0.34
IFT88-204ENST00000461115 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.34
IFT88-204ENST00000461115 TCHHQ07283 1943 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 MYH13Q9UKX3 1938 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 KIAA1551Q9HCM1 1747 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 CPA1P15085 419 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 PLCG2P16885 1265 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
IFT88-204ENST00000461115 EXOSC10Q01780 885 aaKnown RBP12.95□□□□□ -0.34
IFT88-204ENST00000461115 ST3GAL1Q11201 340 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 PKP1Q13835 747 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
IFT88-204ENST00000461115 ALX1Q15699 326 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 SKOR2Q2VWA4 1001 aaPredicted RBP12.95□□□□□ -0.34
IFT88-204ENST00000461115 PI16Q6UXB8 463 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 PIH1D3Q9NQM4 214 aaKnown RBP12.95□□□□□ -0.34
IFT88-204ENST00000461115 MINPP1Q9UNW1 487 aa12.95□□□□□ -0.34
IFT88-204ENST00000461115 CHD4Q14839 1912 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 NRXN2Q9P2S2 1712 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 CACNA1SQ13698 1873 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 PLSCR1O15162 318 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 LARGE1O95461 756 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 RFC4P35249 363 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 EVCP57679 992 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 RASGRF1Q13972 1273 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 ME3Q16798 604 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 SLFNL1Q499Z3 407 aa12.94□□□□□ -0.34
IFT88-204ENST00000461115 ZNF772Q68DY9 489 aaPredicted RBP12.94□□□□□ -0.34
IFT88-204ENST00000461115 TMED8Q6PL24 325 aaPredicted RBP12.94□□□□□ -0.34
IFT88-204ENST00000461115 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
IFT88-204ENST00000461115 HELBQ8NG08 1087 aaPredicted RBP12.94□□□□□ -0.34
IFT88-204ENST00000461115 PUS7LQ9H0K6 701 aaKnown RBP12.94□□□□□ -0.34
IFT88-204ENST00000461115 WDR19Q8NEZ3 1342 aa12.93□□□□□ -0.34
IFT88-204ENST00000461115 IRS2Q9Y4H2 1338 aa12.93□□□□□ -0.34
IFT88-204ENST00000461115 SEMA3EO15041 775 aa12.93□□□□□ -0.34
IFT88-204ENST00000461115 TRAK2O60296 914 aa12.93□□□□□ -0.34
IFT88-204ENST00000461115 PDE6AP16499 860 aa12.93□□□□□ -0.34
IFT88-204ENST00000461115 DEKP35659 375 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms