RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 PDE6AP16499 860 aa20.75■□□□□ 0.91
CDK11A-209ENST00000460465 UBE3CQ15386 1083 aa20.75■□□□□ 0.91
CDK11A-209ENST00000460465 TSGA10IPQ3SY00 556 aa20.75■□□□□ 0.91
CDK11A-209ENST00000460465 ZNF532Q9HCE3 1301 aa20.74■□□□□ 0.91
CDK11A-209ENST00000460465 VPS37DQ86XT2 251 aa20.74■□□□□ 0.91
CDK11A-209ENST00000460465 CYP46A1Q9Y6A2 500 aa20.74■□□□□ 0.91
CDK11A-209ENST00000460465 TCRBV5S4A2TA0A5A2 114 aa20.73■□□□□ 0.91
CDK11A-209ENST00000460465 CYP21A2P08686 494 aa20.73■□□□□ 0.91
CDK11A-209ENST00000460465 PSMA5P28066 241 aa20.73■□□□□ 0.91
CDK11A-209ENST00000460465 AK2P54819 239 aa20.73■□□□□ 0.91
CDK11A-209ENST00000460465 MAP3K12Q12852 859 aa20.73■□□□□ 0.91
CDK11A-209ENST00000460465 RUFY3Q7L099 469 aa20.73■□□□□ 0.91
CDK11A-209ENST00000460465 FBXO33Q7Z6M2 555 aa20.73■□□□□ 0.91
CDK11A-209ENST00000460465 KLRG2A4D1S0 409 aaPredicted RBP20.72■□□□□ 0.91
CDK11A-209ENST00000460465 GPAA1O43292 621 aa20.72■□□□□ 0.91
CDK11A-209ENST00000460465 MMP10P09238 476 aa20.72■□□□□ 0.91
CDK11A-209ENST00000460465 MSL1Q68DK7 614 aa20.72■□□□□ 0.91
CDK11A-209ENST00000460465 PDRG1Q9NUG6 133 aa20.72■□□□□ 0.91
CDK11A-209ENST00000460465 ANKIB1Q9P2G1 1089 aa20.72■□□□□ 0.91
CDK11A-209ENST00000460465 HOXA10P31260 410 aaPredicted RBP20.72■□□□□ 0.91
CDK11A-209ENST00000460465 SLC15A2Q16348 729 aa20.72■□□□□ 0.91
CDK11A-209ENST00000460465 FOXP2O15409 715 aa20.71■□□□□ 0.91
CDK11A-209ENST00000460465 KRT32Q14532 448 aa20.71■□□□□ 0.91
CDK11A-209ENST00000460465 NFKBIBQ15653 356 aa20.71■□□□□ 0.91
CDK11A-209ENST00000460465 MAGEB6Q8N7X4 407 aa20.71■□□□□ 0.91
CDK11A-209ENST00000460465 CIZ1Q9ULV3 898 aaPredicted RBP20.71■□□□□ 0.91
CDK11A-209ENST00000460465 PARP3Q9Y6F1 533 aa20.71■□□□□ 0.91
CDK11A-209ENST00000460465 LRRC37AA6NMS7 1700 aa20.71■□□□□ 0.91
CDK11A-209ENST00000460465 COL11A2P13942 1736 aaPredicted RBP20.71■□□□□ 0.91
CDK11A-209ENST00000460465 COL9A3Q14050 684 aaPredicted RBP20.71■□□□□ 0.91
CDK11A-209ENST00000460465 DENND2AQ9ULE3 1009 aa20.71■□□□□ 0.91
CDK11A-209ENST00000460465 XDHP47989 1333 aa20.71■□□□□ 0.91
CDK11A-209ENST00000460465 IRS2Q9Y4H2 1338 aa20.71■□□□□ 0.91
CDK11A-209ENST00000460465 HIBADHP31937 336 aaKnown RBP20.7■□□□□ 0.9
CDK11A-209ENST00000460465 BLOC1S2Q6QNY1 142 aa20.7■□□□□ 0.9
CDK11A-209ENST00000460465 CRAMP1Q96RY5 1269 aa20.7■□□□□ 0.9
CDK11A-209ENST00000460465 BRIP1Q9BX63 1249 aa20.7■□□□□ 0.9
CDK11A-209ENST00000460465 STK32BQ9NY57 414 aa20.7■□□□□ 0.9
CDK11A-209ENST00000460465 LEMD3Q9Y2U8 911 aa20.7■□□□□ 0.9
CDK11A-209ENST00000460465 CUL4AQ13619 759 aa20.7■□□□□ 0.9
CDK11A-209ENST00000460465 ZGPATQ8N5A5 531 aaKnown RBP20.7■□□□□ 0.9
CDK11A-209ENST00000460465 LRP2BPQ9P2M1 347 aa20.7■□□□□ 0.9
CDK11A-209ENST00000460465 SEMA3EO15041 775 aa20.69■□□□□ 0.9
CDK11A-209ENST00000460465 TXNRD3Q86VQ6 643 aa20.69■□□□□ 0.9
CDK11A-209ENST00000460465 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
CDK11A-209ENST00000460465 RPS6KB1P23443 525 aa20.69■□□□□ 0.9
CDK11A-209ENST00000460465 GPSM2P81274 684 aa20.69■□□□□ 0.9
CDK11A-209ENST00000460465 LARP6Q9BRS8 491 aaKnown RBP20.69■□□□□ 0.9
CDK11A-209ENST00000460465 BBOX1O75936 387 aa20.68■□□□□ 0.9
CDK11A-209ENST00000460465 SF3B2Q13435 895 aaKnown RBP20.68■□□□□ 0.9
CDK11A-209ENST00000460465 TTLL5Q6EMB2 1281 aa20.68■□□□□ 0.9
CDK11A-209ENST00000460465 ABCF2Q9UG63 623 aa20.68■□□□□ 0.9
CDK11A-209ENST00000460465 LIMCH1Q9UPQ0 1083 aa20.68■□□□□ 0.9
CDK11A-209ENST00000460465 CACNA1SQ13698 1873 aa20.68■□□□□ 0.9
CDK11A-209ENST00000460465 FRAT2O75474 233 aaPredicted RBP20.67■□□□□ 0.9
CDK11A-209ENST00000460465 STOX1Q6ZVD7 989 aa20.67■□□□□ 0.9
CDK11A-209ENST00000460465 NEK1Q96PY6 1258 aa20.67■□□□□ 0.9
CDK11A-209ENST00000460465 BAG6P46379 1132 aa20.67■□□□□ 0.9
CDK11A-209ENST00000460465 AIDAQ96BJ3 306 aa20.67■□□□□ 0.9
CDK11A-209ENST00000460465 CTNNA3Q9UI47 895 aa20.67■□□□□ 0.9
CDK11A-209ENST00000460465 LTBP1Q14766 1721 aa20.67■□□□□ 0.9
CDK11A-209ENST00000460465 CWC22Q9HCG8 908 aaKnown RBP20.66■□□□□ 0.9
CDK11A-209ENST00000460465 PDS5AQ29RF7 1337 aaKnown RBP20.66■□□□□ 0.9
CDK11A-209ENST00000460465 FGAP02671 866 aa20.66■□□□□ 0.9
CDK11A-209ENST00000460465 DEFB132Q7Z7B7 95 aa20.66■□□□□ 0.9
CDK11A-209ENST00000460465 TCEANC2Q96MN5 208 aa20.66■□□□□ 0.9
CDK11A-209ENST00000460465 NSFL1CQ9UNZ2 370 aaKnown RBP20.66■□□□□ 0.9
CDK11A-209ENST00000460465 MAST2Q6P0Q8 1798 aa20.66■□□□□ 0.9
CDK11A-209ENST00000460465 SRGNP10124 158 aa20.65■□□□□ 0.9
CDK11A-209ENST00000460465 STRBPQ96SI9 672 aaKnown RBP20.65■□□□□ 0.9
CDK11A-209ENST00000460465 RAI14Q9P0K7 980 aa20.65■□□□□ 0.9
CDK11A-209ENST00000460465 CCDC88AQ3V6T2 1871 aa20.65■□□□□ 0.9
CDK11A-209ENST00000460465 MBD4O95243 580 aa20.65■□□□□ 0.9
CDK11A-209ENST00000460465 PDE6BP35913 854 aa20.65■□□□□ 0.9
CDK11A-209ENST00000460465 INTS4Q96HW7 963 aaKnown RBP20.65■□□□□ 0.9
CDK11A-209ENST00000460465 GPR101Q96P66 508 aaPredicted RBP20.65■□□□□ 0.9
CDK11A-209ENST00000460465 PPEF1O14829 653 aaPredicted RBP20.64■□□□□ 0.89
CDK11A-209ENST00000460465 UFL1O94874 794 aa20.64■□□□□ 0.89
CDK11A-209ENST00000460465 ALDH8A1Q9H2A2 487 aaPredicted RBP20.64■□□□□ 0.89
CDK11A-209ENST00000460465 E7EWF7 191 aa20.64■□□□□ 0.89
CDK11A-209ENST00000460465 LARGE1O95461 756 aa20.64■□□□□ 0.89
CDK11A-209ENST00000460465 NPR1P16066 1061 aa20.64■□□□□ 0.89
CDK11A-209ENST00000460465 ATP2B4P23634 1241 aa20.64■□□□□ 0.89
CDK11A-209ENST00000460465 RAB3GAP1Q15042 981 aa20.64■□□□□ 0.89
CDK11A-209ENST00000460465 IMMTQ16891 758 aaKnown RBP20.64■□□□□ 0.89
CDK11A-209ENST00000460465 GGA1Q9UJY5 639 aa20.64■□□□□ 0.89
CDK11A-209ENST00000460465 CYP7A1P22680 504 aa20.63■□□□□ 0.89
CDK11A-209ENST00000460465 CHAF1AQ13111 956 aaPredicted RBP20.63■□□□□ 0.89
CDK11A-209ENST00000460465 C15orf52Q6ZUT6 534 aaKnown RBP20.63■□□□□ 0.89
CDK11A-209ENST00000460465 TMC4Q7Z404 712 aa20.63■□□□□ 0.89
CDK11A-209ENST00000460465 ARMT1Q9H993 441 aa20.63■□□□□ 0.89
CDK11A-209ENST00000460465 ZBTB22O15209 634 aa20.62■□□□□ 0.89
CDK11A-209ENST00000460465 HAND2P61296 217 aa20.62■□□□□ 0.89
CDK11A-209ENST00000460465 PODXL2Q9NZ53 605 aa20.62■□□□□ 0.89
CDK11A-209ENST00000460465 APPP05067 770 aa20.62■□□□□ 0.89
CDK11A-209ENST00000460465 TOB2Q14106 344 aaPredicted RBP20.62■□□□□ 0.89
CDK11A-209ENST00000460465 ANKRD1Q15327 319 aa20.62■□□□□ 0.89
CDK11A-209ENST00000460465 ADGRA1Q86SQ6 560 aa20.62■□□□□ 0.89
CDK11A-209ENST00000460465 ZSCAN31Q96LW9 406 aaPredicted RBP20.62■□□□□ 0.89
CDK11A-209ENST00000460465 HMGB1P09429 215 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms