RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 ANTXR1Q9H6X2 564 aa11.91□□□□□ -0.5
TNC-204ENST00000460345 ZNF277Q9NRM2 450 aaPredicted RBP11.91□□□□□ -0.5
TNC-204ENST00000460345 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
TNC-204ENST00000460345 CYP2E1P05181 493 aaPredicted RBP11.9□□□□□ -0.5
TNC-204ENST00000460345 IL1R1P14778 569 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 BRCA1P38398 1863 aaKnown RBP11.9□□□□□ -0.5
TNC-204ENST00000460345 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 CASC1Q6TDU7 716 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 TBC1D9Q6ZT07 1266 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 KBTBD3Q8NAB2 608 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 SNED1Q8TER0 1413 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 DUOX1Q9NRD9 1551 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 JAG2Q9Y219 1238 aa11.9□□□□□ -0.5
TNC-204ENST00000460345 LRRFIP1Q32MZ4 808 aaKnown RBP11.89□□□□□ -0.51
TNC-204ENST00000460345 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
TNC-204ENST00000460345 LARGE2Q8N3Y3 721 aa11.89□□□□□ -0.51
TNC-204ENST00000460345 PIH1D3Q9NQM4 214 aaKnown RBP11.89□□□□□ -0.51
TNC-204ENST00000460345 DIAPH3Q9NSV4 1193 aa11.89□□□□□ -0.51
TNC-204ENST00000460345 ABCF2Q9UG63 623 aa11.89□□□□□ -0.51
TNC-204ENST00000460345 NFKBIEO00221 500 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 HIP1O00291 1037 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 ECE2O60344 883 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 IDH1O75874 414 aaKnown RBP11.88□□□□□ -0.51
TNC-204ENST00000460345 CHMLP26374 656 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 IARSP41252 1262 aaKnown RBP11.88□□□□□ -0.51
TNC-204ENST00000460345 GTF2IP78347 998 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 C8orf34Q49A92 452 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 PODNQ7Z5L7 613 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 WDR66Q8TBY9 1149 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNC-204ENST00000460345 VPS33BQ9H267 617 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 LRP2BPQ9P2M1 347 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 AKAP11Q9UKA4 1901 aa11.88□□□□□ -0.51
TNC-204ENST00000460345 PDS5AQ29RF7 1337 aaKnown RBP11.87□□□□□ -0.51
TNC-204ENST00000460345 ZBTB22O15209 634 aa11.87□□□□□ -0.51
TNC-204ENST00000460345 RASSF7Q02833 373 aa11.87□□□□□ -0.51
TNC-204ENST00000460345 MAP3K12Q12852 859 aa11.87□□□□□ -0.51
TNC-204ENST00000460345 TTLL5Q6EMB2 1281 aa11.87□□□□□ -0.51
TNC-204ENST00000460345 ZSCAN25Q6NSZ9 544 aa11.87□□□□□ -0.51
TNC-204ENST00000460345 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
TNC-204ENST00000460345 NIM1KQ8IY84 436 aa11.87□□□□□ -0.51
TNC-204ENST00000460345 ZGPATQ8N5A5 531 aaKnown RBP11.87□□□□□ -0.51
TNC-204ENST00000460345 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
TNC-204ENST00000460345 COL1A1P02452 1464 aaPredicted RBP11.87□□□□□ -0.51
TNC-204ENST00000460345 AK9Q5TCS8 1911 aa11.86□□□□□ -0.51
TNC-204ENST00000460345 RNF113AO15541 343 aaKnown RBP11.86□□□□□ -0.51
TNC-204ENST00000460345 GPR162Q16538 588 aa11.86□□□□□ -0.51
TNC-204ENST00000460345 SLC9C2Q5TAH2 1124 aa11.86□□□□□ -0.51
TNC-204ENST00000460345 SPTY2D1Q68D10 685 aaPredicted RBP11.86□□□□□ -0.51
TNC-204ENST00000460345 CWC27Q6UX04 472 aaKnown RBP11.86□□□□□ -0.51
TNC-204ENST00000460345 TBC1D22AQ8WUA7 517 aa11.86□□□□□ -0.51
TNC-204ENST00000460345 RUFY2Q8WXA3 655 aa11.86□□□□□ -0.51
TNC-204ENST00000460345 JDP2Q8WYK2 163 aa11.86□□□□□ -0.51
TNC-204ENST00000460345 BACH2Q9BYV9 841 aa11.86□□□□□ -0.51
TNC-204ENST00000460345 FAM205AQ6ZU69 1335 aa11.86□□□□□ -0.51
TNC-204ENST00000460345 LTBP3Q9NS15 1303 aa11.86□□□□□ -0.51
TNC-204ENST00000460345 RFX7Q2KHR2 1363 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 CHGBP05060 677 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 ZFYP08048 801 aaPredicted RBP11.85□□□□□ -0.51
TNC-204ENST00000460345 YBX3P16989 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
TNC-204ENST00000460345 KCNA4P22459 653 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 NMIQ13287 307 aaPredicted RBP11.85□□□□□ -0.51
TNC-204ENST00000460345 MFSD14BQ5SR56 506 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 TICAM2Q86XR7 235 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 MAGEB6Q8N7X4 407 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 FAM227BQ96M60 508 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 KCNQ5Q9NR82 932 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 ARFGEF1Q9Y6D6 1849 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 FER1L6Q2WGJ9 1857 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 SALL1Q9NSC2 1324 aa11.85□□□□□ -0.51
TNC-204ENST00000460345 MYH13Q9UKX3 1938 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 USP17L3A6NCW0 530 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 USP17L4A6NCW7 530 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 YDJCA8MPS7 323 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 EIF5BO60841 1220 aaKnown RBP11.84□□□□□ -0.51
TNC-204ENST00000460345 LDHBP07195 334 aaKnown RBP11.84□□□□□ -0.51
TNC-204ENST00000460345 PDE6AP16499 860 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 ADD2P35612 726 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 USP17L1Q7RTZ2 530 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 DZIP1Q86YF9 867 aaKnown RBP11.84□□□□□ -0.51
TNC-204ENST00000460345 ESYT1Q9BSJ8 1104 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 ZNRF3Q9ULT6 936 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 ZNF532Q9HCE3 1301 aa11.84□□□□□ -0.51
TNC-204ENST00000460345 A0A0D9SFI3 127 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 RAD17O75943 681 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 CYP7A1P22680 504 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 PRDX5P30044 214 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 MFAP1P55081 439 aaKnown RBP11.83□□□□□ -0.52
TNC-204ENST00000460345 UBE3CQ15386 1083 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 MCMDC2Q4G0Z9 681 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 ZMYM1Q5SVZ6 1142 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 STRIP1Q5VSL9 837 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 NAA16Q6N069 864 aaPredicted RBP11.83□□□□□ -0.52
TNC-204ENST00000460345 APPBP2Q92624 585 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 HELLSQ9NRZ9 838 aa11.83□□□□□ -0.52
TNC-204ENST00000460345 CHD4Q14839 1912 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms