RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 MROH5Q6ZUA9 1318 aa10.33□□□□□ -0.76
HDAC3-202ENST00000459727 BECN2A8MW95 431 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 MYO1BO43795 1136 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 NR1I2O75469 434 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 PIP4K2AP48426 406 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-202ENST00000459727 ZNF75DP51815 510 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 CTSWP56202 376 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 GSDMDP57764 484 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 FKBP4Q02790 459 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC3-202ENST00000459727 APOBRQ0VD83 1088 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 LRRC24Q50LG9 513 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 METTL24Q5JXM2 366 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 ADALQ6DHV7 355 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 CCAR1Q8IX12 1150 aaKnown RBP10.32□□□□□ -0.76
HDAC3-202ENST00000459727 DRC7Q8IY82 874 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 WASF1Q92558 559 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 DDX17Q92841 729 aaKnown RBP10.32□□□□□ -0.76
HDAC3-202ENST00000459727 PGBD1Q96JS3 809 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 C8orf76Q96K31 380 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 BPIFA3Q9BQP9 254 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 CDCA7Q9BWT1 371 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-202ENST00000459727 TRIM5Q9C035 493 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 TFIP11Q9UBB9 837 aaKnown RBP10.32□□□□□ -0.76
HDAC3-202ENST00000459727 TAF6LQ9Y6J9 622 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 TCHHQ07283 1943 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 RIC1Q4ADV7 1423 aa10.32□□□□□ -0.76
HDAC3-202ENST00000459727 XIRP1Q702N8 1843 aaKnown RBP10.31□□□□□ -0.76
HDAC3-202ENST00000459727 GOLGA8BA8MQT2 603 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 M0R2C6 588 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 KIF2AO00139 706 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-202ENST00000459727 PRC1O43663 620 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 PDE8AO60658 829 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 GNAT2P19087 354 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 ME1P48163 572 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 RCAN1P53805 252 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 SF3A1Q15459 793 aaKnown RBP10.31□□□□□ -0.76
HDAC3-202ENST00000459727 ALX1Q15699 326 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 CAMK4Q16566 473 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 TMED8Q6PL24 325 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-202ENST00000459727 SYNE3Q6ZMZ3 975 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 MB21D2Q8IYB1 491 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-202ENST00000459727 JARID2Q92833 1246 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-202ENST00000459727 OSBP2Q969R2 916 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 DDX11Q96FC9 970 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 BCL11BQ9C0K0 894 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-202ENST00000459727 CNNM2Q9H8M5 875 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 COL14A1Q05707 1796 aaKnown RBP10.31□□□□□ -0.76
HDAC3-202ENST00000459727 ANKRD36CQ5JPF3 1778 aa10.31□□□□□ -0.76
HDAC3-202ENST00000459727 TOGARAM1Q9Y4F4 1720 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 GPAA1O43292 621 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 CTDNEP1O95476 244 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 TUBB4AP04350 444 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-202ENST00000459727 ADD1P35611 737 aaKnown RBP10.3□□□□□ -0.76
HDAC3-202ENST00000459727 ADD2P35612 726 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 IL6STP40189 918 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-202ENST00000459727 STK38Q15208 465 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 PUM3Q15397 648 aaKnown RBP10.3□□□□□ -0.76
HDAC3-202ENST00000459727 LDHAL6AQ6ZMR3 332 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 NLRP10Q86W26 655 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 CKAP2LQ8IYA6 745 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 FBXO18Q8NFZ0 1043 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 LPIN2Q92539 896 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 TIGD1Q96MW7 591 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 TTC12Q9H892 705 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-202ENST00000459727 CNNM1Q9NRU3 951 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 IMPACTQ9P2X3 320 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 HOOK1Q9UJC3 728 aaKnown RBP10.3□□□□□ -0.76
HDAC3-202ENST00000459727 NAP1L2Q9ULW6 460 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-202ENST00000459727 ANGEL1Q9UNK9 670 aaKnown RBP10.3□□□□□ -0.76
HDAC3-202ENST00000459727 RIPOR2Q9Y4F9 1068 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 PAXBP1Q9Y5B6 917 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 MYH15Q9Y2K3 1946 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 DISP2A7MBM2 1401 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 STK36Q9NRP7 1315 aa10.3□□□□□ -0.76
HDAC3-202ENST00000459727 NID2Q14112 1375 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 RTL9Q8NET4 1388 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 KLF18A0A0U1RQI7 1052 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 SMTNL1A8MU46 457 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 TOM1O60784 492 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 PDE8BO95263 885 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 FGAP02671 866 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 SLC5A1P13866 664 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 ITGA6P23229 1130 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 RBM6P78332 1123 aaKnown RBP10.29□□□□□ -0.76
HDAC3-202ENST00000459727 TRIM29Q14134 588 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 SYCP1Q15431 976 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 PARP10Q53GL7 1025 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 FAM173BQ6P4H8 233 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 LUZP1Q86V48 1076 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 FSIP1Q8NA03 581 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 CCDC34Q96HJ3 373 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 ZNF594Q96JF6 807 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-202ENST00000459727 ORC3Q9UBD5 711 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-202ENST00000459727 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 BCL9O00512 1426 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 ARAP2Q8WZ64 1704 aa10.29□□□□□ -0.76
HDAC3-202ENST00000459727 LAMA4Q16363 1823 aa10.28□□□□□ -0.76
HDAC3-202ENST00000459727 DDX60Q8IY21 1712 aaKnown RBP10.28□□□□□ -0.76
HDAC3-202ENST00000459727 CCDC196A0A1B0GTZ2 297 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms