RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 COPS2P61201 443 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 CXCL9Q07325 125 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 LMOD3Q0VAK6 560 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 KMT5BQ4FZB7 885 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 TTLL7Q6ZT98 887 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 LRP10Q7Z4F1 713 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 GPIHBP1Q8IV16 184 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 DPF2Q92785 391 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 PLEKHF1Q96S99 279 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 IRX2Q9BZI1 471 aaPredicted RBP7.43□□□□□ -1.22
VPS8-214ENST00000458721 RRP7AQ9Y3A4 280 aaKnown RBP7.43□□□□□ -1.22
VPS8-214ENST00000458721 PCDHB3Q9Y5E6 796 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 PAPPA2Q9BXP8 1791 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 TAF1P21675 1872 aa7.43□□□□□ -1.22
VPS8-214ENST00000458721 LAMB1P07942 1786 aa7.42□□□□□ -1.22
VPS8-214ENST00000458721 TRAF5O00463 557 aa7.42□□□□□ -1.22
VPS8-214ENST00000458721 HOXB7P09629 217 aa7.42□□□□□ -1.22
VPS8-214ENST00000458721 MYL6BP14649 208 aa7.42□□□□□ -1.22
VPS8-214ENST00000458721 FECHP22830 423 aa7.42□□□□□ -1.22
VPS8-214ENST00000458721 GMPSP49915 693 aaPredicted RBP7.42□□□□□ -1.22
VPS8-214ENST00000458721 GRAPQ13588 217 aa7.42□□□□□ -1.22
VPS8-214ENST00000458721 DDX46Q7L014 1031 aaKnown RBP7.42□□□□□ -1.22
VPS8-214ENST00000458721 MPNDQ8N594 471 aa7.42□□□□□ -1.22
VPS8-214ENST00000458721 GRAPLQ8TC17 118 aaPredicted RBP7.42□□□□□ -1.22
VPS8-214ENST00000458721 BCL2L13Q9BXK5 485 aa7.42□□□□□ -1.22
VPS8-214ENST00000458721 SH3TC1Q8TE82 1336 aa7.42□□□□□ -1.22
VPS8-214ENST00000458721 TNRC18O15417 2968 aaPredicted RBP7.42□□□□□ -1.22
VPS8-214ENST00000458721 H7C1D1 291 aa7.41□□□□□ -1.22
VPS8-214ENST00000458721 CFHP08603 1231 aa7.41□□□□□ -1.22
VPS8-214ENST00000458721 HSP90B1P14625 803 aaKnown RBP7.41□□□□□ -1.22
VPS8-214ENST00000458721 NLRP10Q86W26 655 aa7.41□□□□□ -1.22
VPS8-214ENST00000458721 NGEFQ8N5V2 710 aa7.41□□□□□ -1.22
VPS8-214ENST00000458721 CCDC102AQ96A19 550 aa7.41□□□□□ -1.22
VPS8-214ENST00000458721 GLIS2Q9BZE0 524 aaPredicted RBP7.41□□□□□ -1.22
VPS8-214ENST00000458721 MCOLN1Q9GZU1 580 aa7.41□□□□□ -1.22
VPS8-214ENST00000458721 TSPYL4Q9UJ04 414 aa7.41□□□□□ -1.22
VPS8-214ENST00000458721 CCDC85CA6NKD9 419 aa7.4□□□□□ -1.22
VPS8-214ENST00000458721 ACTN4O43707 911 aaKnown RBP7.4□□□□□ -1.22
VPS8-214ENST00000458721 AOC2O75106 756 aa7.4□□□□□ -1.22
VPS8-214ENST00000458721 HUNKP57058 714 aa7.4□□□□□ -1.22
VPS8-214ENST00000458721 GRM1Q13255 1194 aa7.4□□□□□ -1.22
VPS8-214ENST00000458721 PPP1R18Q6NYC8 613 aa7.4□□□□□ -1.22
VPS8-214ENST00000458721 EYA3Q99504 573 aa7.4□□□□□ -1.22
VPS8-214ENST00000458721 MIS18AQ9NYP9 233 aa7.4□□□□□ -1.22
VPS8-214ENST00000458721 TRMT112Q9UI30 125 aaKnown RBP7.4□□□□□ -1.22
VPS8-214ENST00000458721 CNOT7Q9UIV1 285 aaKnown RBP7.4□□□□□ -1.22
VPS8-214ENST00000458721 MYH3P11055 1940 aa7.4□□□□□ -1.23
VPS8-214ENST00000458721 SCN9AQ15858 1988 aa7.4□□□□□ -1.23
VPS8-214ENST00000458721 GGCXP38435 758 aa7.39□□□□□ -1.23
VPS8-214ENST00000458721 FKBP1BP68106 108 aa7.39□□□□□ -1.23
VPS8-214ENST00000458721 FMR1Q06787 632 aaKnown RBP eCLIP7.39□□□□□ -1.23
VPS8-214ENST00000458721 TCIRG1Q13488 830 aa7.39□□□□□ -1.23
VPS8-214ENST00000458721 WASHC4Q2M389 1173 aa7.39□□□□□ -1.23
VPS8-214ENST00000458721 RGMBQ6NW40 437 aa7.39□□□□□ -1.23
VPS8-214ENST00000458721 BLOC1S3Q6QNY0 202 aa7.39□□□□□ -1.23
VPS8-214ENST00000458721 KRT26Q7Z3Y9 468 aa7.39□□□□□ -1.23
VPS8-214ENST00000458721 C2orf69Q8N8R5 385 aa7.39□□□□□ -1.23
VPS8-214ENST00000458721 TRPM4Q8TD43 1214 aa7.39□□□□□ -1.23
VPS8-214ENST00000458721 GBA2Q9HCG7 927 aaPredicted RBP7.39□□□□□ -1.23
VPS8-214ENST00000458721 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.39□□□□□ -1.23
VPS8-214ENST00000458721 POLR2AP24928 1970 aaKnown RBP7.39□□□□□ -1.23
VPS8-214ENST00000458721 ZNF646O15015 1829 aaPredicted RBP7.38□□□□□ -1.23
VPS8-214ENST00000458721 PITPNM2Q9BZ72 1349 aa7.38□□□□□ -1.23
VPS8-214ENST00000458721 YDJCA8MPS7 323 aa7.38□□□□□ -1.23
VPS8-214ENST00000458721 RAD17O75943 681 aa7.38□□□□□ -1.23
VPS8-214ENST00000458721 SLC10A3P09131 477 aa7.38□□□□□ -1.23
VPS8-214ENST00000458721 HIRAP54198 1017 aaPredicted RBP7.38□□□□□ -1.23
VPS8-214ENST00000458721 TRIM28Q13263 835 aaKnown RBP7.38□□□□□ -1.23
VPS8-214ENST00000458721 DGKZQ13574 1117 aa7.38□□□□□ -1.23
VPS8-214ENST00000458721 CNGB1Q14028 1251 aaPredicted RBP7.38□□□□□ -1.23
VPS8-214ENST00000458721 SF3B3Q15393 1217 aaKnown RBP7.38□□□□□ -1.23
VPS8-214ENST00000458721 PLBD2Q8NHP8 589 aa7.38□□□□□ -1.23
VPS8-214ENST00000458721 NKX2-3Q8TAU0 364 aa7.38□□□□□ -1.23
VPS8-214ENST00000458721 DCPSQ96C86 337 aaKnown RBP7.38□□□□□ -1.23
VPS8-214ENST00000458721 ZNF408Q9H9D4 720 aa7.38□□□□□ -1.23
VPS8-214ENST00000458721 PODXL2Q9NZ53 605 aa7.38□□□□□ -1.23
VPS8-214ENST00000458721 RBBP6Q7Z6E9 1792 aaKnown RBP7.38□□□□□ -1.23
VPS8-214ENST00000458721 ECM29Q5VYK3 1845 aa7.37□□□□□ -1.23
VPS8-214ENST00000458721 FAM155AB1AL88 458 aaPredicted RBP7.37□□□□□ -1.23
VPS8-214ENST00000458721 PSMD14O00487 310 aa7.37□□□□□ -1.23
VPS8-214ENST00000458721 TCERG1O14776 1098 aaKnown RBP7.37□□□□□ -1.23
VPS8-214ENST00000458721 HCLS1P14317 486 aaPredicted RBP7.37□□□□□ -1.23
VPS8-214ENST00000458721 MMP14P50281 582 aa7.37□□□□□ -1.23
VPS8-214ENST00000458721 PKN2Q16513 984 aaKnown RBP7.37□□□□□ -1.23
VPS8-214ENST00000458721 PROSER3Q2NL68 480 aa7.37□□□□□ -1.23
VPS8-214ENST00000458721 NOM1Q5C9Z4 860 aaKnown RBP7.37□□□□□ -1.23
VPS8-214ENST00000458721 COPS6Q7L5N1 327 aa7.37□□□□□ -1.23
VPS8-214ENST00000458721 SULF1Q8IWU6 871 aa7.37□□□□□ -1.23
VPS8-214ENST00000458721 AGBL3Q8NEM8 1001 aa7.37□□□□□ -1.23
VPS8-214ENST00000458721 XAGE3Q8WTP9 111 aa7.37□□□□□ -1.23
VPS8-214ENST00000458721 THUMPD2Q9BTF0 503 aaKnown RBP7.37□□□□□ -1.23
VPS8-214ENST00000458721 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
VPS8-214ENST00000458721 DBF4Q9UBU7 674 aaPredicted RBP7.37□□□□□ -1.23
VPS8-214ENST00000458721 DAXXQ9UER7 740 aaPredicted RBP7.37□□□□□ -1.23
VPS8-214ENST00000458721 COL1A1P02452 1464 aaPredicted RBP7.36□□□□□ -1.23
VPS8-214ENST00000458721 RTL9Q8NET4 1388 aa7.36□□□□□ -1.23
VPS8-214ENST00000458721 CHL1O00533 1208 aa7.36□□□□□ -1.23
VPS8-214ENST00000458721 ECE2O60344 883 aa7.36□□□□□ -1.23
VPS8-214ENST00000458721 EIF2S2P20042 333 aaKnown RBP7.36□□□□□ -1.23
VPS8-214ENST00000458721 RIPK4P57078 832 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms