RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 SPEF2Q9C093 1822 aa10.63□□□□□ -0.71
CLTCL1-204ENST00000458188 LTBP3Q9NS15 1303 aa10.63□□□□□ -0.71
CLTCL1-204ENST00000458188 DLEC1Q9Y238 1755 aa10.63□□□□□ -0.71
CLTCL1-204ENST00000458188 RGS3P49796 1198 aa10.63□□□□□ -0.71
CLTCL1-204ENST00000458188 GTF2IP78347 998 aa10.63□□□□□ -0.71
CLTCL1-204ENST00000458188 C15orf52Q6ZUT6 534 aaKnown RBP10.63□□□□□ -0.71
CLTCL1-204ENST00000458188 TDRD7Q8NHU6 1098 aaKnown RBP10.63□□□□□ -0.71
CLTCL1-204ENST00000458188 COL4A5P29400 1685 aa10.63□□□□□ -0.71
CLTCL1-204ENST00000458188 CACNA1SQ13698 1873 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 IL1R1P14778 569 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 MCAMP43121 646 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 CXCL9Q07325 125 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 RASGRF1Q13972 1273 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 TBC1D9Q6ZT07 1266 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 PLEKHM2Q8IWE5 1019 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 EDC3Q96F86 508 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 DNAJC2Q99543 621 aaKnown RBP10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 ECHDC1Q9NTX5 307 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 HMG20BQ9P0W2 317 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 ZNRF3Q9ULT6 936 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 ZBTB12Q9Y330 459 aaPredicted RBP10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 GJA3Q9Y6H8 435 aa10.62□□□□□ -0.71
CLTCL1-204ENST00000458188 ZNF541Q9H0D2 1346 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 F8W031 263 aaPredicted RBP10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 PSMD14O00487 310 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 MX1P20591 662 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 ZAP70P43403 619 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 PDE1AP54750 535 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 GRIK5Q16478 980 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 TTLL5Q6EMB2 1281 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 PODNQ7Z5L7 613 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 VPS33BQ9H267 617 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 ANTXR1Q9H6X2 564 aa10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 GNL3LQ9NVN8 582 aaKnown RBP10.61□□□□□ -0.71
CLTCL1-204ENST00000458188 SALL3Q9BXA9 1300 aa10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 BRCA1P38398 1863 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 FZD9O00144 591 aa10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 DDNO94850 711 aaPredicted RBP10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 UQCRFS1P1P0C7P4 283 aa10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 ATP5JP18859 108 aa10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 ARID4AP29374 1257 aaPredicted RBP10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 EIF6P56537 245 aaKnown RBP10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 SPATA5Q8NB90 893 aa10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 PI4K2BQ8TCG2 481 aa10.6□□□□□ -0.71
CLTCL1-204ENST00000458188 LRRC37AA6NMS7 1700 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 SHTN1A0MZ66 631 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 USP17L3A6NCW0 530 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 USP17L4A6NCW7 530 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 GOLIM4O00461 696 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 CYP2E1P05181 493 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 VEGFAP15692 232 aaPredicted RBP10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 CIAPIN1Q6FI81 312 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 USP17L1Q7RTZ2 530 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 CERS5Q8N5B7 392 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 GPATCH3Q96I76 525 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 PIH1D3Q9NQM4 214 aaKnown RBP10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 ABCF2Q9UG63 623 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 DENND2AQ9ULE3 1009 aa10.59□□□□□ -0.71
CLTCL1-204ENST00000458188 COL1A1P02452 1464 aaPredicted RBP10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 CHGBP05060 677 aa10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 SLFNL1Q499Z3 407 aa10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 MFSD14BQ5SR56 506 aa10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 DACT2Q5SW24 774 aa10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 KIAA0825Q8IV33 1275 aa10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 PRDM10Q9NQV6 1147 aa10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 STAP2Q9UGK3 403 aa10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 LTBP1Q14766 1721 aa10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 TTC41PQ6P2S7 1318 aa10.58□□□□□ -0.72
CLTCL1-204ENST00000458188 TRIM6-TRIM34B2RNG4 842 aa10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 VIL1P09327 827 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 GMPSP49915 693 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 SCNN1DP51172 638 aa10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 TNIP1Q15025 636 aa10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 RBM26Q5T8P6 1007 aaKnown RBP10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 STRIP1Q5VSL9 837 aa10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 RSBN1LQ6PCB5 846 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 RILPL2Q969X0 211 aa10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 AIDAQ96BJ3 306 aa10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 ZNF512BQ96KM6 892 aaPredicted RBP10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 HAUS7Q99871 368 aa10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 FAM205AQ6ZU69 1335 aa10.57□□□□□ -0.72
CLTCL1-204ENST00000458188 ARFGEF1Q9Y6D6 1849 aa10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 SEMA3EO15041 775 aa10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 ERC2O15083 957 aa10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 GLRX3O76003 335 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 GSPT1P15170 499 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 PRDX5P30044 214 aa10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 WDR66Q8TBY9 1149 aa10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 RAI14Q9P0K7 980 aa10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 LRP2BPQ9P2M1 347 aa10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 PCDHAC2Q9Y5I4 1007 aa10.56□□□□□ -0.72
CLTCL1-204ENST00000458188 FER1L6Q2WGJ9 1857 aa10.55□□□□□ -0.72
CLTCL1-204ENST00000458188 IDH1O75874 414 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-204ENST00000458188 CTCFP49711 727 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-204ENST00000458188 DIXDC1Q155Q3 683 aa10.55□□□□□ -0.72
CLTCL1-204ENST00000458188 TTC22Q5TAA0 569 aa10.55□□□□□ -0.72
CLTCL1-204ENST00000458188 DPY19L2Q6NUT2 758 aa10.55□□□□□ -0.72
CLTCL1-204ENST00000458188 ERICH6Q7L0X2 663 aa10.55□□□□□ -0.72
CLTCL1-204ENST00000458188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms