RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 FKBP4Q02790 459 aaKnown RBP eCLIP12.82□□□□□ -0.36
RFX3-211ENST00000458034 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
RFX3-211ENST00000458034 NOLC1Q14978 699 aaKnown RBP eCLIP12.82□□□□□ -0.36
RFX3-211ENST00000458034 TTF1Q15361 905 aaPredicted RBP12.82□□□□□ -0.36
RFX3-211ENST00000458034 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
RFX3-211ENST00000458034 LRRC2Q9BYS8 371 aa12.82□□□□□ -0.36
RFX3-211ENST00000458034 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
RFX3-211ENST00000458034 SLAIN2Q9P270 581 aa12.82□□□□□ -0.36
RFX3-211ENST00000458034 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
RFX3-211ENST00000458034 WNK3Q9BYP7 1800 aa12.82□□□□□ -0.36
RFX3-211ENST00000458034 SALL1Q9NSC2 1324 aa12.82□□□□□ -0.36
RFX3-211ENST00000458034 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.82□□□□□ -0.36
RFX3-211ENST00000458034 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 NUP98P52948 1817 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 ANKRD18BA2A2Z9 1011 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 PDIA3P30101 505 aaKnown RBP12.81□□□□□ -0.36
RFX3-211ENST00000458034 EVCP57679 992 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 CAMK4Q16566 473 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 STX1AQ16623 288 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 ATP2B3Q16720 1220 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 ANO6Q4KMQ2 910 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 METTL24Q5JXM2 366 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 GIGYF2Q6Y7W6 1299 aaKnown RBP12.81□□□□□ -0.36
RFX3-211ENST00000458034 RALYLQ86SE5 291 aaKnown RBP12.81□□□□□ -0.36
RFX3-211ENST00000458034 TDRD7Q8NHU6 1098 aaKnown RBP12.81□□□□□ -0.36
RFX3-211ENST00000458034 NCOA7Q8NI08 942 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 PGBD1Q96JS3 809 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 ZNF512BQ96KM6 892 aaPredicted RBP12.81□□□□□ -0.36
RFX3-211ENST00000458034 SPTLC3Q9NUV7 552 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 AKAP11Q9UKA4 1901 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
RFX3-211ENST00000458034 ATRNO75882 1429 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 RIC1Q4ADV7 1423 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 CHD4Q14839 1912 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 C4AP0C0L4 1744 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 C4BP0C0L5 1744 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 GOLGA6L19H0YKK7 550 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 KINO60870 393 aaKnown RBP12.8□□□□□ -0.36
RFX3-211ENST00000458034 DTNBO60941 627 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 CCT2P78371 535 aaKnown RBP12.8□□□□□ -0.36
RFX3-211ENST00000458034 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
RFX3-211ENST00000458034 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 CKAP2LQ8IYA6 745 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 CBX8Q9HC52 389 aa12.8□□□□□ -0.36
RFX3-211ENST00000458034 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
RFX3-211ENST00000458034 NR1I2O75469 434 aa12.79□□□□□ -0.36
RFX3-211ENST00000458034 CTDNEP1O95476 244 aa12.79□□□□□ -0.36
RFX3-211ENST00000458034 CHGBP05060 677 aa12.79□□□□□ -0.36
RFX3-211ENST00000458034 UQCRFS1P1P0C7P4 283 aa12.79□□□□□ -0.36
RFX3-211ENST00000458034 CDC25BP30305 580 aa12.79□□□□□ -0.36
RFX3-211ENST00000458034 ADORA1P30542 326 aa12.79□□□□□ -0.36
RFX3-211ENST00000458034 TRDNQ13061 729 aa12.79□□□□□ -0.36
RFX3-211ENST00000458034 CHAF1AQ13111 956 aaPredicted RBP12.79□□□□□ -0.36
RFX3-211ENST00000458034 PDCL3Q9H2J4 239 aa12.79□□□□□ -0.36
RFX3-211ENST00000458034 TTC12Q9H892 705 aaPredicted RBP12.79□□□□□ -0.36
RFX3-211ENST00000458034 LRP5O75197 1615 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 ZNF213O14771 459 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 PRC1O43663 620 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 ZAP70P43403 619 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 ZNF165P49910 485 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 ZNF75DP51815 510 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 CTSWP56202 376 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 CPLX2Q6PUV4 134 aaKnown RBP12.78□□□□□ -0.36
RFX3-211ENST00000458034 BRAPQ7Z569 592 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 DRC7Q8IY82 874 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 AK7Q96M32 723 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 ANO10Q9NW15 660 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 TBC1D2BQ9UPU7 963 aa12.78□□□□□ -0.36
RFX3-211ENST00000458034 DOCK2Q92608 1830 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 GOLGA8BA8MQT2 603 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 ERVV-1B6SEH8 477 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 CPLX1O14810 134 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 GPAA1O43292 621 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 CDKL5O76039 1030 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
RFX3-211ENST00000458034 HSPA2P54652 639 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 LDHAL6AQ6ZMR3 332 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 LUZP1Q86V48 1076 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 NLRP10Q86W26 655 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 PLA2G4DQ86XP0 818 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 MB21D2Q8IYB1 491 aaPredicted RBP12.77□□□□□ -0.37
RFX3-211ENST00000458034 MYRIPQ8NFW9 859 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 KCNG4Q8TDN1 519 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 PIGBQ92521 554 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 FAM89AQ96GI7 184 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 ZNF830Q96NB3 372 aaPredicted RBP12.77□□□□□ -0.37
RFX3-211ENST00000458034 TRIM5Q9C035 493 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
RFX3-211ENST00000458034 RTEL1Q9NZ71 1219 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 RIPOR2Q9Y4F9 1068 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
RFX3-211ENST00000458034 KLF18A0A0U1RQI7 1052 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 A0A1W2PQ27 194 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 A0A1W2PQ64 194 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 A0A1W2PQD8 194 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 PDE8AO60658 829 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms