RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 UQCRFS1P1P0C7P4 283 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 CHST3Q7LGC8 479 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 ZSCAN30Q86W11 494 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 LPIN2Q92539 896 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 KIF3AQ9Y496 699 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 BCORQ6W2J9 1755 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 DOCK2Q92608 1830 aa19.67■□□□□ 0.74
CCDC43-202ENST00000457422 PHKA1P46020 1223 aa19.66■□□□□ 0.74
CCDC43-202ENST00000457422 HAND2P61296 217 aa19.66■□□□□ 0.74
CCDC43-202ENST00000457422 UBE3CQ15386 1083 aa19.66■□□□□ 0.74
CCDC43-202ENST00000457422 CCDC102BQ68D86 513 aa19.66■□□□□ 0.74
CCDC43-202ENST00000457422 NAA16Q6N069 864 aaPredicted RBP19.66■□□□□ 0.74
CCDC43-202ENST00000457422 FUCA2Q9BTY2 467 aa19.66■□□□□ 0.74
CCDC43-202ENST00000457422 PIH1D3Q9NQM4 214 aaKnown RBP19.66■□□□□ 0.74
CCDC43-202ENST00000457422 RTL9Q8NET4 1388 aa19.66■□□□□ 0.74
CCDC43-202ENST00000457422 PDIA3P30101 505 aaKnown RBP19.66■□□□□ 0.74
CCDC43-202ENST00000457422 UTP14AQ9BVJ6 771 aaKnown RBP19.66■□□□□ 0.74
CCDC43-202ENST00000457422 PTPDC1A2A3K4 754 aa19.65■□□□□ 0.74
CCDC43-202ENST00000457422 HELBQ8NG08 1087 aaPredicted RBP19.65■□□□□ 0.74
CCDC43-202ENST00000457422 WDR19Q8NEZ3 1342 aa19.65■□□□□ 0.74
CCDC43-202ENST00000457422 H3BQV1 296 aa19.64■□□□□ 0.74
CCDC43-202ENST00000457422 IFFO2Q5TF58 517 aa19.64■□□□□ 0.74
CCDC43-202ENST00000457422 MB21D2Q8IYB1 491 aaPredicted RBP19.64■□□□□ 0.74
CCDC43-202ENST00000457422 LEO1Q8WVC0 666 aaPredicted RBP19.64■□□□□ 0.74
CCDC43-202ENST00000457422 SPATA32Q96LK8 384 aa19.64■□□□□ 0.74
CCDC43-202ENST00000457422 CCT2P78371 535 aaKnown RBP19.64■□□□□ 0.73
CCDC43-202ENST00000457422 NAP1L2Q9ULW6 460 aaPredicted RBP19.64■□□□□ 0.73
CCDC43-202ENST00000457422 SLC9C2Q5TAH2 1124 aa19.63■□□□□ 0.73
CCDC43-202ENST00000457422 SMARCC1Q92922 1105 aaPredicted RBP19.63■□□□□ 0.73
CCDC43-202ENST00000457422 NCOA5Q9HCD5 579 aaKnown RBP19.63■□□□□ 0.73
CCDC43-202ENST00000457422 MCM5P33992 734 aa19.63■□□□□ 0.73
CCDC43-202ENST00000457422 NCOA7Q8NI08 942 aa19.63■□□□□ 0.73
CCDC43-202ENST00000457422 SEC31BQ9NQW1 1179 aa19.63■□□□□ 0.73
CCDC43-202ENST00000457422 GPHNQ9NQX3 736 aaPredicted RBP19.63■□□□□ 0.73
CCDC43-202ENST00000457422 TFIP11Q9UBB9 837 aaKnown RBP19.63■□□□□ 0.73
CCDC43-202ENST00000457422 ZNF213O14771 459 aa19.62■□□□□ 0.73
CCDC43-202ENST00000457422 IDH1O75874 414 aaKnown RBP19.62■□□□□ 0.73
CCDC43-202ENST00000457422 SLC5A1P13866 664 aa19.62■□□□□ 0.73
CCDC43-202ENST00000457422 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
CCDC43-202ENST00000457422 NTSR2O95665 410 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 FOSBP53539 338 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 CCDC152Q4G0S7 254 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 CFAP45Q9UL16 551 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 NOL7Q9UMY1 257 aaKnown RBP19.61■□□□□ 0.73
CCDC43-202ENST00000457422 NIP7Q9Y221 180 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCDC43-202ENST00000457422 TCRBV5S4A2TA0A5A2 114 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 KCNQ2O43526 872 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 PDE6AP16499 860 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 GIMAP6Q6P9H5 292 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 WWC3Q9ULE0 1092 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 ZNF532Q9HCE3 1301 aa19.61■□□□□ 0.73
CCDC43-202ENST00000457422 PRC1O43663 620 aa19.6■□□□□ 0.73
CCDC43-202ENST00000457422 PIP4K2BP78356 416 aa19.6■□□□□ 0.73
CCDC43-202ENST00000457422 MPHOSPH8Q99549 860 aa19.6■□□□□ 0.73
CCDC43-202ENST00000457422 ZMYM6O95789 1325 aa19.6■□□□□ 0.73
CCDC43-202ENST00000457422 SNAP23O00161 211 aa19.6■□□□□ 0.73
CCDC43-202ENST00000457422 LIG1P18858 919 aa19.6■□□□□ 0.73
CCDC43-202ENST00000457422 ANTXR2P58335 489 aa19.6■□□□□ 0.73
CCDC43-202ENST00000457422 ATL3Q6DD88 541 aa19.6■□□□□ 0.73
CCDC43-202ENST00000457422 RALYLQ86SE5 291 aaKnown RBP19.6■□□□□ 0.73
CCDC43-202ENST00000457422 DDX19AQ9NUU7 478 aaKnown RBP19.6■□□□□ 0.73
CCDC43-202ENST00000457422 CARMIL3Q8ND23 1372 aa19.59■□□□□ 0.73
CCDC43-202ENST00000457422 GOLGA6L4A6NEF3 574 aa19.59■□□□□ 0.73
CCDC43-202ENST00000457422 ADD1P35611 737 aaKnown RBP19.59■□□□□ 0.73
CCDC43-202ENST00000457422 SPATA5Q8NB90 893 aa19.59■□□□□ 0.73
CCDC43-202ENST00000457422 NUP62CLQ9H1M0 184 aa19.59■□□□□ 0.73
CCDC43-202ENST00000457422 CCDC39Q9UFE4 941 aa19.59■□□□□ 0.73
CCDC43-202ENST00000457422 MSNP26038 577 aaKnown RBP19.58■□□□□ 0.73
CCDC43-202ENST00000457422 NBPF3Q9H094 633 aa19.58■□□□□ 0.73
CCDC43-202ENST00000457422 ZNF652Q9Y2D9 606 aa19.58■□□□□ 0.73
CCDC43-202ENST00000457422 C4AP0C0L4 1744 aa19.58■□□□□ 0.72
CCDC43-202ENST00000457422 C4BP0C0L5 1744 aa19.58■□□□□ 0.72
CCDC43-202ENST00000457422 PPFIA3O75145 1194 aa19.58■□□□□ 0.72
CCDC43-202ENST00000457422 RASGRF1Q13972 1273 aa19.58■□□□□ 0.72
CCDC43-202ENST00000457422 ALX1Q15699 326 aa19.58■□□□□ 0.72
CCDC43-202ENST00000457422 CLEC4GQ6UXB4 293 aa19.58■□□□□ 0.72
CCDC43-202ENST00000457422 PGBD1Q96JS3 809 aa19.58■□□□□ 0.72
CCDC43-202ENST00000457422 DHX16O60231 1041 aaKnown RBP19.57■□□□□ 0.72
CCDC43-202ENST00000457422 CCDC192P0DO97 292 aa19.57■□□□□ 0.72
CCDC43-202ENST00000457422 FDPSP14324 419 aaKnown RBP19.57■□□□□ 0.72
CCDC43-202ENST00000457422 IGHMBP2P38935 993 aaKnown RBP19.57■□□□□ 0.72
CCDC43-202ENST00000457422 MAP3K11Q16584 847 aa19.57■□□□□ 0.72
CCDC43-202ENST00000457422 RBM43Q6ZSC3 357 aaKnown RBP19.57■□□□□ 0.72
CCDC43-202ENST00000457422 A0A1B0GUL6 1792 aa19.57■□□□□ 0.72
CCDC43-202ENST00000457422 BCL9LQ86UU0 1499 aa19.57■□□□□ 0.72
CCDC43-202ENST00000457422 CASZ1Q86V15 1759 aa19.57■□□□□ 0.72
CCDC43-202ENST00000457422 TBC1D10CQ8IV04 446 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 STRBPQ96SI9 672 aaKnown RBP19.56■□□□□ 0.72
CCDC43-202ENST00000457422 DACT1Q9NYF0 836 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 HPS5Q9UPZ3 1129 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 CHD4Q14839 1912 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 KLF18A0A0U1RQI7 1052 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 GOLGA8BA8MQT2 603 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 RGL2O15211 777 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 TRDNQ13061 729 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 FAM98CQ17RN3 349 aaKnown RBP19.56■□□□□ 0.72
CCDC43-202ENST00000457422 LINC00116Q8NCU8 138 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 RGS22Q8NE09 1264 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.56■□□□□ 0.72
CCDC43-202ENST00000457422 RCOR1Q9UKL0 485 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms