RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CCDC186Q7Z3E2 898 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 ZNF34Q8IZ26 560 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 ZSCAN31Q96LW9 406 aaPredicted RBP14.63□□□□□ -0.07
LINC00959-201ENST00000456581 C16orf45Q96MC5 204 aaPredicted RBP14.63□□□□□ -0.07
LINC00959-201ENST00000456581 DNAJC25Q9H1X3 360 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 TNMDQ9H2S6 317 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 SEC31BQ9NQW1 1179 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 SPTLC3Q9NUV7 552 aa14.63□□□□□ -0.07
LINC00959-201ENST00000456581 THRAP3Q9Y2W1 955 aaKnown RBP14.63□□□□□ -0.07
LINC00959-201ENST00000456581 RPS6KB1P23443 525 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 ZAP70P43403 619 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 TTC39AQ5SRH9 613 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 CDCA7Q9BWT1 371 aaPredicted RBP14.62□□□□□ -0.07
LINC00959-201ENST00000456581 TM6SF1Q9BZW5 370 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 PALLDQ8WX93 1383 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 GOLGB1Q14789 3259 aaKnown RBP14.62□□□□□ -0.07
LINC00959-201ENST00000456581 TTLL5Q6EMB2 1281 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 STOX1Q6ZVD7 989 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 DRC7Q8IY82 874 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 OSBP2Q969R2 916 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 RIC1Q4ADV7 1423 aa14.62□□□□□ -0.07
LINC00959-201ENST00000456581 CDHR2Q9BYE9 1310 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 ANKRD18BA2A2Z9 1011 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 M0R2C6 588 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 LEO1Q8WVC0 666 aaPredicted RBP14.61□□□□□ -0.07
LINC00959-201ENST00000456581 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 MAST3O60307 1309 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 GOLGA6L4A6NEF3 574 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 CCDC144BQ3MJ40 725 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 FAM200AQ8TCP9 573 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 BICD2Q8TD16 824 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 ERVV-1B6SEH8 477 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 CAMTA2O94983 1202 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 HSP90B1P14625 803 aaKnown RBP14.61□□□□□ -0.07
LINC00959-201ENST00000456581 HSPA1LP34931 641 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 CCDC158Q5M9N0 1113 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 RNF20Q5VTR2 975 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 USPL1Q5W0Q7 1092 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 BRF1Q92994 677 aa14.61□□□□□ -0.07
LINC00959-201ENST00000456581 PDE8AO60658 829 aa14.6□□□□□ -0.07
LINC00959-201ENST00000456581 ZMYM1Q5SVZ6 1142 aa14.6□□□□□ -0.07
LINC00959-201ENST00000456581 CHST3Q7LGC8 479 aa14.6□□□□□ -0.07
LINC00959-201ENST00000456581 MAP7D2Q96T17 732 aa14.6□□□□□ -0.07
LINC00959-201ENST00000456581 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
LINC00959-201ENST00000456581 NIP7Q9Y221 180 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC00959-201ENST00000456581 MCAMP43121 646 aa14.6□□□□□ -0.07
LINC00959-201ENST00000456581 GUCY1B3Q02153 619 aa14.6□□□□□ -0.07
LINC00959-201ENST00000456581 Q6ZUG5 572 aa14.6□□□□□ -0.07
LINC00959-201ENST00000456581 TRIM5Q9C035 493 aa14.6□□□□□ -0.07
LINC00959-201ENST00000456581 WASHC4Q2M389 1173 aa14.59□□□□□ -0.07
LINC00959-201ENST00000456581 BARGINQ6ZT62 677 aa14.59□□□□□ -0.07
LINC00959-201ENST00000456581 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC00959-201ENST00000456581 NAP1L2Q9ULW6 460 aaPredicted RBP14.59□□□□□ -0.07
LINC00959-201ENST00000456581 V9GYY5 206 aaPredicted RBP14.59□□□□□ -0.07
LINC00959-201ENST00000456581 WTIPA6NIX2 430 aaPredicted RBP14.59□□□□□ -0.07
LINC00959-201ENST00000456581 USP27XA6NNY8 438 aa14.59□□□□□ -0.07
LINC00959-201ENST00000456581 RNF113AO15541 343 aaKnown RBP14.59□□□□□ -0.07
LINC00959-201ENST00000456581 HSPD1P10809 573 aaKnown RBP14.59□□□□□ -0.07
LINC00959-201ENST00000456581 PSMA5P28066 241 aa14.59□□□□□ -0.07
LINC00959-201ENST00000456581 PHKA1P46020 1223 aa14.59□□□□□ -0.07
LINC00959-201ENST00000456581 HMGN5P82970 282 aaKnown RBP14.59□□□□□ -0.07
LINC00959-201ENST00000456581 VGLL2Q8N8G2 317 aa14.59□□□□□ -0.07
LINC00959-201ENST00000456581 LINC00116Q8NCU8 138 aa14.59□□□□□ -0.07
LINC00959-201ENST00000456581 PRIMPOLQ96LW4 560 aa14.59□□□□□ -0.07
LINC00959-201ENST00000456581 AKAP2Q9Y2D5 859 aa14.59□□□□□ -0.07
LINC00959-201ENST00000456581 MYH3P11055 1940 aa14.58□□□□□ -0.07
LINC00959-201ENST00000456581 SH3TC1Q8TE82 1336 aa14.58□□□□□ -0.07
LINC00959-201ENST00000456581 BICDL1Q6ZP65 573 aa14.58□□□□□ -0.08
LINC00959-201ENST00000456581 PUS7LQ9H0K6 701 aaKnown RBP14.58□□□□□ -0.08
LINC00959-201ENST00000456581 NCOA5Q9HCD5 579 aaKnown RBP14.58□□□□□ -0.08
LINC00959-201ENST00000456581 BCL9LQ86UU0 1499 aa14.58□□□□□ -0.08
LINC00959-201ENST00000456581 HAND2P61296 217 aa14.58□□□□□ -0.08
LINC00959-201ENST00000456581 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
LINC00959-201ENST00000456581 NWD2Q9ULI1 1742 aa14.58□□□□□ -0.08
LINC00959-201ENST00000456581 MYO5AQ9Y4I1 1855 aaKnown RBP14.58□□□□□ -0.08
LINC00959-201ENST00000456581 ANKRD36CQ5JPF3 1778 aa14.58□□□□□ -0.08
LINC00959-201ENST00000456581 FOXP2O15409 715 aa14.57□□□□□ -0.08
LINC00959-201ENST00000456581 CCT2P78371 535 aaKnown RBP14.57□□□□□ -0.08
LINC00959-201ENST00000456581 GTF2F1P35269 517 aaKnown RBP eCLIP14.57□□□□□ -0.08
LINC00959-201ENST00000456581 C11orf57Q6ZUT1 292 aaPredicted RBP14.57□□□□□ -0.08
LINC00959-201ENST00000456581 CCDC24Q8N4L8 307 aa14.57□□□□□ -0.08
LINC00959-201ENST00000456581 CACTINQ8WUQ7 758 aaKnown RBP14.57□□□□□ -0.08
LINC00959-201ENST00000456581 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
LINC00959-201ENST00000456581 PDE8BO95263 885 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 SCRN1Q12765 414 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 UTP14AQ9BVJ6 771 aaKnown RBP14.56□□□□□ -0.08
LINC00959-201ENST00000456581 HMG20BQ9P0W2 317 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 ZNF165P49910 485 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 TSGA10IPQ3SY00 556 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 SMAP1Q8IYB5 467 aaPredicted RBP14.56□□□□□ -0.08
LINC00959-201ENST00000456581 GTF3C6Q969F1 213 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 HELLSQ9NRZ9 838 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 H3BQV1 296 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 FGD1P98174 961 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 IFFO2Q5TF58 517 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 AMIGO3Q86WK7 504 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 RAB11FIP4Q86YS3 637 aa14.56□□□□□ -0.08
LINC00959-201ENST00000456581 PDCL2Q8N4E4 241 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms