RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 PTPN12Q05209 780 aaKnown RBP12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 AIMP1Q12904 312 aaKnown RBP12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 BICDL1Q6ZP65 573 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 C2CD5Q86YS7 1000 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 FAM227BQ96M60 508 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 COL11A2P13942 1736 aaPredicted RBP12.49□□□□□ -0.41
GTF3C2-206ENST00000454704 ANKRD31Q8N7Z5 1873 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 ZC3H4Q9UPT8 1303 aaKnown RBP12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 PRAMEF22A3QJZ6 481 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 VPS37CA5D8V6 355 aaPredicted RBP12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 KDM4AO75164 1064 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 LMNB1P20700 586 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 HMGN5P82970 282 aaKnown RBP12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 HSP90AA2PQ14568 343 aaPredicted RBP12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 TTLL6Q8N841 843 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 ZNF496Q96IT1 587 aaPredicted RBP12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 NEK1Q96PY6 1258 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 DSCC1Q9BVC3 393 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 GDPD2Q9HCC8 539 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 TPCN1Q9ULQ1 816 aa12.48□□□□□ -0.41
GTF3C2-206ENST00000454704 DYNC1I1O14576 645 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 CIAO1O76071 339 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 IL15P40933 162 aaPredicted RBP12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 CASP7P55210 303 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 DNM1Q05193 864 aaKnown RBP12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 MAP3K11Q16584 847 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 RBM43Q6ZSC3 357 aaKnown RBP12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 DDX60Q8IY21 1712 aaKnown RBP12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 RNF214Q8ND24 703 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 PIBF1Q8WXW3 757 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 GTF3C6Q969F1 213 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 PRIMPOLQ96LW4 560 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 NUP62CLQ9H1M0 184 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 CFAP45Q9UL16 551 aa12.47□□□□□ -0.41
GTF3C2-206ENST00000454704 H0YIN7 160 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 H7C1W4 665 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 NFKBIEO00221 500 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 STARD3NLO95772 234 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 MYL6BP14649 208 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 EIF5P55010 431 aaKnown RBP12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 TOB2Q14106 344 aaPredicted RBP12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 FBXL16Q8N461 479 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 JMYQ8N9B5 988 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 FAM200AQ8TCP9 573 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 CHAMP1Q96JM3 812 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 PDCL3Q9H2J4 239 aa12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 DBNLQ9UJU6 430 aaKnown RBP12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
GTF3C2-206ENST00000454704 ZNF609O15014 1411 aa12.46□□□□□ -0.42
GTF3C2-206ENST00000454704 ANKRD36CQ5JPF3 1778 aa12.46□□□□□ -0.42
GTF3C2-206ENST00000454704 A0A087WZG4 1122 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 GOLGA6L4A6NEF3 574 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 GLTPD2A6NH11 291 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 CTAGE5O15320 804 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 TBC1D9BQ66K14 1250 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 CCDC191Q8NCU4 936 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 UBE2Q2Q8WVN8 375 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 AGXT2Q9BYV1 514 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 SIL1Q9H173 461 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 TLR7Q9NYK1 1049 aaKnown RBP12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 ADCY5O95622 1261 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 CPA1P15085 419 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 TFCP2Q12800 502 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 EPHA10Q5JZY3 1008 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 SMARCC2Q8TAQ2 1214 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 SPATA32Q96LK8 384 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 CWC25Q9NXE8 425 aaPredicted RBP12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 MYH3P11055 1940 aa12.45□□□□□ -0.42
GTF3C2-206ENST00000454704 PFKFB2O60825 505 aa12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 ZFYP08048 801 aaPredicted RBP12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 VEGFAP15692 232 aaPredicted RBP12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 COL13A1Q5TAT6 717 aaPredicted RBP12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 TTC6Q86TZ1 520 aa12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 ZNF622Q969S3 477 aaKnown RBP eCLIP12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 SPTLC3Q9NUV7 552 aa12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 TBC1D2BQ9UPU7 963 aa12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 USP16Q9Y5T5 823 aa12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 CACNA1SQ13698 1873 aa12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 FER1L6Q2WGJ9 1857 aa12.44□□□□□ -0.42
GTF3C2-206ENST00000454704 BCORQ6W2J9 1755 aa12.43□□□□□ -0.42
GTF3C2-206ENST00000454704 PRR5LQ6MZQ0 368 aa12.43□□□□□ -0.42
GTF3C2-206ENST00000454704 CDC37L1Q7L3B6 337 aa12.43□□□□□ -0.42
GTF3C2-206ENST00000454704 DHX32Q7L7V1 743 aaKnown RBP12.43□□□□□ -0.42
GTF3C2-206ENST00000454704 ZNF589Q86UQ0 364 aaPredicted RBP12.43□□□□□ -0.42
GTF3C2-206ENST00000454704 NECAB1Q8N987 351 aa12.43□□□□□ -0.42
GTF3C2-206ENST00000454704 CLSTN2Q9H4D0 955 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms