RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 TCRBV5S4A2TA0A5A2 114 aa29.35■■■□□ 2.29
MCF2L-219ENST00000453297 FBXO33Q7Z6M2 555 aa29.35■■■□□ 2.29
MCF2L-219ENST00000453297 MAP3K12Q12852 859 aa29.34■■■□□ 2.29
MCF2L-219ENST00000453297 IQSEC3Q9UPP2 1182 aaPredicted RBP29.34■■■□□ 2.29
MCF2L-219ENST00000453297 RBM17Q96I25 401 aaKnown RBP29.34■■■□□ 2.29
MCF2L-219ENST00000453297 KLRG2A4D1S0 409 aaPredicted RBP29.33■■■□□ 2.29
MCF2L-219ENST00000453297 GPAA1O43292 621 aa29.33■■■□□ 2.29
MCF2L-219ENST00000453297 BLOC1S2Q6QNY1 142 aa29.33■■■□□ 2.29
MCF2L-219ENST00000453297 VPS37DQ86XT2 251 aa29.33■■■□□ 2.29
MCF2L-219ENST00000453297 ZGPATQ8N5A5 531 aaKnown RBP29.33■■■□□ 2.29
MCF2L-219ENST00000453297 CAMKK2Q96RR4 588 aa29.33■■■□□ 2.29
MCF2L-219ENST00000453297 CWC22Q9HCG8 908 aaKnown RBP29.33■■■□□ 2.29
MCF2L-219ENST00000453297 ANKRD31Q8N7Z5 1873 aa29.33■■■□□ 2.29
MCF2L-219ENST00000453297 FOXP2O15409 715 aa29.32■■■□□ 2.28
MCF2L-219ENST00000453297 KLRK1P26718 216 aa29.32■■■□□ 2.28
MCF2L-219ENST00000453297 EZH2Q15910 746 aaKnown RBP29.32■■■□□ 2.28
MCF2L-219ENST00000453297 FRAT2O75474 233 aaPredicted RBP29.31■■■□□ 2.28
MCF2L-219ENST00000453297 HOXA10P31260 410 aaPredicted RBP29.31■■■□□ 2.28
MCF2L-219ENST00000453297 COL9A3Q14050 684 aaPredicted RBP29.31■■■□□ 2.28
MCF2L-219ENST00000453297 LIMCH1Q9UPQ0 1083 aa29.31■■■□□ 2.28
MCF2L-219ENST00000453297 RPS6KB1P23443 525 aa29.31■■■□□ 2.28
MCF2L-219ENST00000453297 EN1Q05925 392 aaPredicted RBP29.31■■■□□ 2.28
MCF2L-219ENST00000453297 COL1A1P02452 1464 aaPredicted RBP29.31■■■□□ 2.28
MCF2L-219ENST00000453297 MAGEB6Q8N7X4 407 aa29.3■■■□□ 2.28
MCF2L-219ENST00000453297 INTS4Q96HW7 963 aaKnown RBP29.3■■■□□ 2.28
MCF2L-219ENST00000453297 DENND2AQ9ULE3 1009 aa29.3■■■□□ 2.28
MCF2L-219ENST00000453297 IRS2Q9Y4H2 1338 aa29.3■■■□□ 2.28
MCF2L-219ENST00000453297 MYH13Q9UKX3 1938 aa29.3■■■□□ 2.28
MCF2L-219ENST00000453297 SLC51AQ86UW1 340 aa29.29■■■□□ 2.28
MCF2L-219ENST00000453297 NEK1Q96PY6 1258 aa29.29■■■□□ 2.28
MCF2L-219ENST00000453297 ALDH8A1Q9H2A2 487 aaPredicted RBP29.29■■■□□ 2.28
MCF2L-219ENST00000453297 LEMD3Q9Y2U8 911 aa29.29■■■□□ 2.28
MCF2L-219ENST00000453297 LAMA4Q16363 1823 aa29.29■■■□□ 2.28
MCF2L-219ENST00000453297 SEMA3EO15041 775 aa29.29■■■□□ 2.28
MCF2L-219ENST00000453297 HIBADHP31937 336 aaKnown RBP29.29■■■□□ 2.28
MCF2L-219ENST00000453297 ANKIB1Q9P2G1 1089 aa29.29■■■□□ 2.28
MCF2L-219ENST00000453297 CTNNA3Q9UI47 895 aa29.29■■■□□ 2.28
MCF2L-219ENST00000453297 RAB3GAP1Q15042 981 aa29.28■■■□□ 2.28
MCF2L-219ENST00000453297 CRAMP1Q96RY5 1269 aa29.28■■■□□ 2.28
MCF2L-219ENST00000453297 LARP6Q9BRS8 491 aaKnown RBP29.28■■■□□ 2.28
MCF2L-219ENST00000453297 BRIP1Q9BX63 1249 aa29.28■■■□□ 2.28
MCF2L-219ENST00000453297 LRP2BPQ9P2M1 347 aa29.28■■■□□ 2.28
MCF2L-219ENST00000453297 XDHP47989 1333 aa29.28■■■□□ 2.28
MCF2L-219ENST00000453297 A0A0G2JLW4 131 aa29.27■■■□□ 2.28
MCF2L-219ENST00000453297 STOX1Q6ZVD7 989 aa29.27■■■□□ 2.28
MCF2L-219ENST00000453297 BBOX1O75936 387 aa29.27■■■□□ 2.28
MCF2L-219ENST00000453297 TTLL5Q6EMB2 1281 aa29.27■■■□□ 2.28
MCF2L-219ENST00000453297 ANO8Q9HCE9 1232 aaPredicted RBP29.27■■■□□ 2.28
MCF2L-219ENST00000453297 FGAP02671 866 aa29.26■■■□□ 2.27
MCF2L-219ENST00000453297 MMP10P09238 476 aa29.26■■■□□ 2.27
MCF2L-219ENST00000453297 SLC15A2Q16348 729 aa29.26■■■□□ 2.27
MCF2L-219ENST00000453297 TXNRD3Q86VQ6 643 aa29.26■■■□□ 2.27
MCF2L-219ENST00000453297 PARP3Q9Y6F1 533 aa29.26■■■□□ 2.27
MCF2L-219ENST00000453297 ZSCAN31Q96LW9 406 aaPredicted RBP29.25■■■□□ 2.27
MCF2L-219ENST00000453297 PDS5AQ29RF7 1337 aaKnown RBP29.25■■■□□ 2.27
MCF2L-219ENST00000453297 ZBTB22O15209 634 aa29.24■■■□□ 2.27
MCF2L-219ENST00000453297 AIDAQ96BJ3 306 aa29.24■■■□□ 2.27
MCF2L-219ENST00000453297 STRBPQ96SI9 672 aaKnown RBP29.24■■■□□ 2.27
MCF2L-219ENST00000453297 ABCF2Q9UG63 623 aa29.24■■■□□ 2.27
MCF2L-219ENST00000453297 GPSM2P81274 684 aa29.24■■■□□ 2.27
MCF2L-219ENST00000453297 TCEANC2Q96MN5 208 aa29.24■■■□□ 2.27
MCF2L-219ENST00000453297 QSER1Q2KHR3 1735 aa29.24■■■□□ 2.27
MCF2L-219ENST00000453297 E7EWF7 191 aa29.23■■■□□ 2.27
MCF2L-219ENST00000453297 ANKRD1Q15327 319 aa29.23■■■□□ 2.27
MCF2L-219ENST00000453297 MSL1Q68DK7 614 aa29.23■■■□□ 2.27
MCF2L-219ENST00000453297 TNPO1Q92973 898 aaKnown RBP29.23■■■□□ 2.27
MCF2L-219ENST00000453297 STK32BQ9NY57 414 aa29.23■■■□□ 2.27
MCF2L-219ENST00000453297 LARGE1O95461 756 aa29.22■■■□□ 2.27
MCF2L-219ENST00000453297 NUCB2P80303 420 aa29.22■■■□□ 2.27
MCF2L-219ENST00000453297 IMMTQ16891 758 aaKnown RBP29.22■■■□□ 2.27
MCF2L-219ENST00000453297 HMGB1P09429 215 aaKnown RBP29.22■■■□□ 2.27
MCF2L-219ENST00000453297 TOB2Q14106 344 aaPredicted RBP29.22■■■□□ 2.27
MCF2L-219ENST00000453297 SH2B1Q9NRF2 756 aaPredicted RBP29.22■■■□□ 2.27
MCF2L-219ENST00000453297 RAI14Q9P0K7 980 aa29.22■■■□□ 2.27
MCF2L-219ENST00000453297 LRRC37AA6NMS7 1700 aa29.21■■■□□ 2.27
MCF2L-219ENST00000453297 MBD4O95243 580 aa29.21■■■□□ 2.27
MCF2L-219ENST00000453297 C15orf52Q6ZUT6 534 aaKnown RBP29.21■■■□□ 2.27
MCF2L-219ENST00000453297 TPCN1Q9ULQ1 816 aa29.2■■■□□ 2.27
MCF2L-219ENST00000453297 NSFL1CQ9UNZ2 370 aaKnown RBP29.2■■■□□ 2.27
MCF2L-219ENST00000453297 CACNA1SQ13698 1873 aa29.2■■■□□ 2.27
MCF2L-219ENST00000453297 ATP2B4P23634 1241 aa29.2■■■□□ 2.26
MCF2L-219ENST00000453297 TMC4Q7Z404 712 aa29.2■■■□□ 2.26
MCF2L-219ENST00000453297 ARMT1Q9H993 441 aa29.2■■■□□ 2.26
MCF2L-219ENST00000453297 SRGNP10124 158 aa29.19■■■□□ 2.26
MCF2L-219ENST00000453297 CYP7A1P22680 504 aa29.19■■■□□ 2.26
MCF2L-219ENST00000453297 ME3Q16798 604 aa29.19■■■□□ 2.26
MCF2L-219ENST00000453297 PATL2C9JE40 543 aaKnown RBP29.18■■■□□ 2.26
MCF2L-219ENST00000453297 APPP05067 770 aa29.18■■■□□ 2.26
MCF2L-219ENST00000453297 PDE6BP35913 854 aa29.18■■■□□ 2.26
MCF2L-219ENST00000453297 HAND2P61296 217 aa29.18■■■□□ 2.26
MCF2L-219ENST00000453297 ALX1Q15699 326 aa29.18■■■□□ 2.26
MCF2L-219ENST00000453297 DHX32Q7L7V1 743 aaKnown RBP29.18■■■□□ 2.26
MCF2L-219ENST00000453297 PODXL2Q9NZ53 605 aa29.18■■■□□ 2.26
MCF2L-219ENST00000453297 ZNF213O14771 459 aa29.17■■■□□ 2.26
MCF2L-219ENST00000453297 NPR1P16066 1061 aa29.17■■■□□ 2.26
MCF2L-219ENST00000453297 COL11A2P13942 1736 aaPredicted RBP29.17■■■□□ 2.26
MCF2L-219ENST00000453297 MCM4P33991 863 aa29.17■■■□□ 2.26
MCF2L-219ENST00000453297 SF3B2Q13435 895 aaKnown RBP29.17■■■□□ 2.26
MCF2L-219ENST00000453297 GGA1Q9UJY5 639 aa29.17■■■□□ 2.26
MCF2L-219ENST00000453297 PPEF1O14829 653 aaPredicted RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms