RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 USP28Q96RU2 1077 aa13□□□□□ -0.33
DDR1-239ENST00000452441 ZSWIM4Q9H7M6 989 aa13□□□□□ -0.33
DDR1-239ENST00000452441 NBPF26B4DH59 902 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 B4E1Z4 1266 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 NECTIN1Q15223 517 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 NBPF10Q6P3W6 841 aaKnown RBP12.99□□□□□ -0.33
DDR1-239ENST00000452441 TMC6Q7Z403 805 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 NBPF15Q8N660 670 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 SLC26A6Q9BXS9 759 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 AP5Z1O43299 807 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 CTNNA3Q9UI47 895 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 LTN1O94822 1766 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 IFIT3O14879 490 aaKnown RBP12.99□□□□□ -0.33
DDR1-239ENST00000452441 RANBP6O60518 1105 aaKnown RBP12.99□□□□□ -0.33
DDR1-239ENST00000452441 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
DDR1-239ENST00000452441 DHX32Q7L7V1 743 aaKnown RBP12.99□□□□□ -0.33
DDR1-239ENST00000452441 PRIMPOLQ96LW4 560 aa12.99□□□□□ -0.33
DDR1-239ENST00000452441 PRDM1O75626 825 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 NAA30Q147X3 362 aaPredicted RBP12.98□□□□□ -0.33
DDR1-239ENST00000452441 PDCL2Q8N4E4 241 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 PIGBQ92521 554 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 CEP57L1Q8IYX8 460 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 KAZALD1Q96I82 304 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 ANKIB1Q9P2G1 1089 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 WDR17Q8IZU2 1322 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 GREM2Q9H772 168 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 C1orf167Q5SNV9 1468 aa12.98□□□□□ -0.33
DDR1-239ENST00000452441 RNF113AO15541 343 aaKnown RBP12.97□□□□□ -0.33
DDR1-239ENST00000452441 HLFQ16534 295 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 IL17RAQ96F46 866 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 TEX13AQ9BXU3 409 aaPredicted RBP12.97□□□□□ -0.33
DDR1-239ENST00000452441 E7EWF7 191 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 ZPR1O75312 459 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 SKILP12757 684 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 GOLGA8FQ08AF8 430 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 GOLGA8DPQ0D2H9 430 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 ST3GAL1Q11201 340 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 DHX8Q14562 1220 aaKnown RBP12.97□□□□□ -0.33
DDR1-239ENST00000452441 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
DDR1-239ENST00000452441 GPIHBP1Q8IV16 184 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
DDR1-239ENST00000452441 RIOK3O14730 519 aaKnown RBP12.96□□□□□ -0.33
DDR1-239ENST00000452441 F8W031 263 aaPredicted RBP12.96□□□□□ -0.33
DDR1-239ENST00000452441 HSPD1P10809 573 aaKnown RBP12.96□□□□□ -0.33
DDR1-239ENST00000452441 ATP5JP18859 108 aa12.96□□□□□ -0.33
DDR1-239ENST00000452441 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.33
DDR1-239ENST00000452441 TMEM67Q5HYA8 995 aa12.96□□□□□ -0.33
DDR1-239ENST00000452441 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.33
DDR1-239ENST00000452441 HMG20BQ9P0W2 317 aa12.96□□□□□ -0.33
DDR1-239ENST00000452441 NFAT5O94916 1531 aa12.96□□□□□ -0.33
DDR1-239ENST00000452441 FER1L4A9Z1Z3 1794 aa12.96□□□□□ -0.33
DDR1-239ENST00000452441 SLC3A2P08195 630 aaKnown RBP12.96□□□□□ -0.34
DDR1-239ENST00000452441 SLC5A1P13866 664 aa12.96□□□□□ -0.34
DDR1-239ENST00000452441 CTDSPL2Q05D32 466 aa12.96□□□□□ -0.34
DDR1-239ENST00000452441 PDIA6Q15084 440 aa12.96□□□□□ -0.34
DDR1-239ENST00000452441 MAGEB6Q8N7X4 407 aa12.96□□□□□ -0.34
DDR1-239ENST00000452441 STAMQ92783 540 aa12.96□□□□□ -0.34
DDR1-239ENST00000452441 TRERF1Q96PN7 1200 aa12.96□□□□□ -0.34
DDR1-239ENST00000452441 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.34
DDR1-239ENST00000452441 KCNF1Q9H3M0 494 aa12.96□□□□□ -0.34
DDR1-239ENST00000452441 SRCAPQ6ZRS2 3230 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 COBLO75128 1261 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.346e-6■■■■□ 24.8
DDR1-239ENST00000452441 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 ALG1Q9BT22 464 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 FUCA2Q9BTY2 467 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 NAT10Q9H0A0 1025 aaKnown RBP12.95□□□□□ -0.34
DDR1-239ENST00000452441 COPRSQ9NQ92 184 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 ERICH4A6NGS2 130 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 U2AF2P26368 475 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDR1-239ENST00000452441 PDE4CQ08493 712 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 PTPN14Q15678 1187 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 NACAP1Q9BZK3 213 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 DENND2AQ9ULE3 1009 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 GOLGA8AA7E2F4 631 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 MARCH6O60337 910 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 ZSCAN25Q6NSZ9 544 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 CCDC94Q9BW85 323 aaPredicted RBP12.95□□□□□ -0.34
DDR1-239ENST00000452441 TM6SF1Q9BZW5 370 aa12.95□□□□□ -0.34
DDR1-239ENST00000452441 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 GPAA1O43292 621 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 AFMP43652 599 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
DDR1-239ENST00000452441 KIAA1524Q8TCG1 905 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 OSBP2Q969R2 916 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 UBAC1Q9BSL1 405 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 STX17P56962 302 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 BCL2L12Q9HB09 334 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 FGAP02671 866 aa12.94□□□□□ -0.34
DDR1-239ENST00000452441 OLFM4Q6UX06 510 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms