RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 FANCCQ00597 558 aa6.54□□□□□ -1.36
VPS8-211ENST00000452140 EDARADDQ8WWZ3 215 aa6.54□□□□□ -1.36
VPS8-211ENST00000452140 SH2B1Q9NRF2 756 aaPredicted RBP6.54□□□□□ -1.36
VPS8-211ENST00000452140 PPP4R2Q9NY27 417 aa6.54□□□□□ -1.36
VPS8-211ENST00000452140 F6X3S4 739 aa6.53□□□□□ -1.36
VPS8-211ENST00000452140 RGS9O75916 674 aaPredicted RBP6.53□□□□□ -1.36
VPS8-211ENST00000452140 ZNF76P36508 570 aa6.53□□□□□ -1.36
VPS8-211ENST00000452140 TAF1CQ15572 869 aaPredicted RBP6.53□□□□□ -1.36
VPS8-211ENST00000452140 TPTE2Q6XPS3 522 aa6.53□□□□□ -1.36
VPS8-211ENST00000452140 CHSY3Q70JA7 882 aa6.53□□□□□ -1.36
VPS8-211ENST00000452140 SPOCK3Q9BQ16 436 aa6.53□□□□□ -1.36
VPS8-211ENST00000452140 FRRS1LQ9P0K9 344 aa6.53□□□□□ -1.36
VPS8-211ENST00000452140 M0R082 166 aa6.52□□□□□ -1.37
VPS8-211ENST00000452140 AMPD1P23109 780 aa6.52□□□□□ -1.37
VPS8-211ENST00000452140 ZNF157P51786 506 aaPredicted RBP6.52□□□□□ -1.37
VPS8-211ENST00000452140 FAAP100Q0VG06 881 aa6.52□□□□□ -1.37
VPS8-211ENST00000452140 GRIK5Q16478 980 aa6.52□□□□□ -1.37
VPS8-211ENST00000452140 TXNDC11Q6PKC3 985 aa6.52□□□□□ -1.37
VPS8-211ENST00000452140 ALYREFQ86V81 257 aaKnown RBP6.52□□□□□ -1.37
VPS8-211ENST00000452140 ZNF417Q8TAU3 575 aa6.52□□□□□ -1.37
VPS8-211ENST00000452140 ZNF587Q96SQ5 575 aaPredicted RBP6.52□□□□□ -1.37
VPS8-211ENST00000452140 TRIM56Q9BRZ2 755 aaKnown RBP6.52□□□□□ -1.37
VPS8-211ENST00000452140 ZNF576Q9H609 170 aa6.52□□□□□ -1.37
VPS8-211ENST00000452140 USP31Q70CQ4 1352 aa6.52□□□□□ -1.37
VPS8-211ENST00000452140 CELA3AP09093 270 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 PTPRAP18433 802 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 EPHA1P21709 976 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 ITPKAP23677 461 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 CCDC85BQ15834 202 aaPredicted RBP6.51□□□□□ -1.37
VPS8-211ENST00000452140 C20orf204Q6ZNR8 217 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 METTL16Q86W50 562 aaKnown RBP6.51□□□□□ -1.37
VPS8-211ENST00000452140 BSNDQ8WZ55 320 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 RNF34Q969K3 372 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 BTBD6Q96KE9 485 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 MKL2Q9ULH7 1088 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 SOX13Q9UN79 622 aa6.51□□□□□ -1.37
VPS8-211ENST00000452140 ADAM23O75077 832 aa6.5□□□□□ -1.37
VPS8-211ENST00000452140 XRCC5P13010 732 aaKnown RBP6.5□□□□□ -1.37
VPS8-211ENST00000452140 ERCC5P28715 1186 aaPredicted RBP6.5□□□□□ -1.37
VPS8-211ENST00000452140 AFF1P51825 1210 aaKnown RBP6.5□□□□□ -1.37
VPS8-211ENST00000452140 MAP3K11Q16584 847 aa6.5□□□□□ -1.37
VPS8-211ENST00000452140 ZNF394Q53GI3 561 aa6.5□□□□□ -1.37
VPS8-211ENST00000452140 VN1R5Q7Z5H4 357 aa6.5□□□□□ -1.37
VPS8-211ENST00000452140 NT5DC4Q86YG4 428 aa6.5□□□□□ -1.37
VPS8-211ENST00000452140 IL22RA1Q8N6P7 574 aa6.5□□□□□ -1.37
VPS8-211ENST00000452140 SEC31BQ9NQW1 1179 aa6.5□□□□□ -1.37
VPS8-211ENST00000452140 GPN3Q9UHW5 284 aaPredicted RBP6.5□□□□□ -1.37
VPS8-211ENST00000452140 PCDHGB7Q9Y5F8 929 aa6.5□□□□□ -1.37
VPS8-211ENST00000452140 PIK3R2O00459 728 aa6.49□□□□□ -1.37
VPS8-211ENST00000452140 LILRB5O75023 590 aa6.49□□□□□ -1.37
VPS8-211ENST00000452140 CDC27P30260 824 aa6.49□□□□□ -1.37
VPS8-211ENST00000452140 ST13P50502 369 aaKnown RBP6.49□□□□□ -1.37
VPS8-211ENST00000452140 PCDH1Q08174 1060 aa6.49□□□□□ -1.37
VPS8-211ENST00000452140 HGSNATQ68CP4 663 aa6.49□□□□□ -1.37
VPS8-211ENST00000452140 ADAM19Q9H013 955 aa6.49□□□□□ -1.37
VPS8-211ENST00000452140 CLEC4MQ9H2X3 399 aaPredicted RBP6.49□□□□□ -1.37
VPS8-211ENST00000452140 COPRSQ9NQ92 184 aa6.49□□□□□ -1.37
VPS8-211ENST00000452140 METTL5Q9NRN9 209 aaKnown RBP6.49□□□□□ -1.37
VPS8-211ENST00000452140 GGT7Q9UJ14 662 aa6.49□□□□□ -1.37
VPS8-211ENST00000452140 PPM1HQ9ULR3 514 aa6.49□□□□□ -1.37
VPS8-211ENST00000452140 FAM177BA6PVY3 158 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 PAGE1O75459 146 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 PROCP04070 461 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 BAG6P46379 1132 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 PTPN12Q05209 780 aaKnown RBP6.48□□□□□ -1.37
VPS8-211ENST00000452140 RAD51AP2Q09MP3 1159 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 ZNF423Q2M1K9 1284 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 HS2ST1Q7LGA3 356 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 SLC7A3Q8WY07 619 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 TTC9Q92623 222 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 RRAGCQ9HB90 399 aa6.48□□□□□ -1.37
VPS8-211ENST00000452140 LINC01387J3KSC0 135 aa6.47□□□□□ -1.37
VPS8-211ENST00000452140 ENC1O14682 589 aa6.47□□□□□ -1.37
VPS8-211ENST00000452140 SNRPNP63162 240 aaKnown RBP6.47□□□□□ -1.37
VPS8-211ENST00000452140 IKBKEQ14164 716 aa6.47□□□□□ -1.37
VPS8-211ENST00000452140 WFDC8Q8IUA0 241 aa6.47□□□□□ -1.37
VPS8-211ENST00000452140 CARD10Q9BWT7 1032 aa6.47□□□□□ -1.37
VPS8-211ENST00000452140 H3BRJ5 948 aa6.46□□□□□ -1.38
VPS8-211ENST00000452140 SOX1O00570 391 aaPredicted RBP6.46□□□□□ -1.38
VPS8-211ENST00000452140 ITGB2P05107 769 aa6.46□□□□□ -1.38
VPS8-211ENST00000452140 ESRRAP11474 423 aaPredicted RBP6.46□□□□□ -1.38
VPS8-211ENST00000452140 CABP4P57796 275 aa6.46□□□□□ -1.38
VPS8-211ENST00000452140 RPS26P11Q5JNZ5 115 aaPredicted RBP6.46□□□□□ -1.38
VPS8-211ENST00000452140 MSL1Q68DK7 614 aa6.46□□□□□ -1.38
VPS8-211ENST00000452140 USP48Q86UV5 1035 aa6.46□□□□□ -1.38
VPS8-211ENST00000452140 NECAB3Q96P71 396 aaPredicted RBP6.46□□□□□ -1.38
VPS8-211ENST00000452140 KBTBD4Q9NVX7 518 aa6.46□□□□□ -1.38
VPS8-211ENST00000452140 PPME1Q9Y570 386 aa6.46□□□□□ -1.38
VPS8-211ENST00000452140 B3GALT4O96024 378 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 NID1P14543 1247 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 HOXB4P17483 251 aaPredicted RBP6.45□□□□□ -1.38
VPS8-211ENST00000452140 DGKGP49619 791 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 RACK1P63244 317 aaKnown RBP6.45□□□□□ -1.38
VPS8-211ENST00000452140 COL9A3Q14050 684 aaPredicted RBP6.45□□□□□ -1.38
VPS8-211ENST00000452140 SV2BQ7L1I2 683 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 ERMP1Q7Z2K6 904 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 DMRTC2Q8IXT2 367 aaPredicted RBP6.45□□□□□ -1.38
VPS8-211ENST00000452140 STK35Q8TDR2 534 aa6.45□□□□□ -1.38
VPS8-211ENST00000452140 NOC4LQ9BVI4 516 aaKnown RBP6.45□□□□□ -1.38
VPS8-211ENST00000452140 CEP44Q9C0F1 390 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms